Works by Gall, Astrid

Results: 24

Bugs full of viruses.

Published in:

Nature Reviews Microbiology, 2015, v. 13, n. 5, p. 253, doi. 10.1038/nrmicro3479

By:

Gall, Astrid

Publication type:

Article

An elephantine viral problem.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 8, p. 512, doi. 10.1038/nrmicro3075

By:

Gall, Astrid;
Palser, Anne

Publication type:

Article

Die praktischen Auswirkungen aktueller Gerichtsurteile zur Zulassung von Pflanzenschutzmitteln.

Published in:

Julius-Kühn-Archiv, 2021, n. 467, p. 283

By:

Gall, Astrid

Publication type:

Article

Genome-wide evolutionary dynamics of influenza B viruses on a global scale.

Published in:

PLoS Pathogens, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.ppat.1006749

By:

Langat, Pinky;
Edwards, Stephanie;
Gall, Astrid;
Kellam, Paul;
Watson, Simon J.;
Raghwani, Jayna;
Pybus, Oliver G.;
Rambaut, Andrew;
Dudas, Gytis;
Bedford, Trevor;
Bowden, Thomas A.;
Daniels, Rodney;
McCauley, John;
Russell, Colin

Publication type:

Article

Accessing Livestock Resources in Ensembl.

Published in:

Frontiers in Genetics, 2021, v. 14, p. N.PAG, doi. 10.3389/fgene.2021.650228

By:

Martin, Fergal J.;
Gall, Astrid;
Szpak, Michal;
Flicek, Paul

Publication type:

Article

Rapid HIV disease progression following superinfection in an HLA-B27:05/ B57:01-positive transmission recipient.

Published in:

Retrovirology, 2018, v. 15, p. 1, doi. 10.1186/s12977-018-0390-9

By:

Brener, Jacqui;
Gall, Astrid;
Hurst, Jacob;
Batorsky, Rebecca;
Lavandier, Nora;
Chen, Fabian;
Edwards, Anne;
Bolton, Chrissy;
Dsouza, Reena;
Allen, Todd;
Pybus, Oliver G.;
Kellam, Paul;
Matthews, Philippa C.;
Goulder, Philip J. R.

Publication type:

Article

PHYLOSCANNER: Inferring Transmission from Within- and Between-Host Pathogen Genetic Diversity.

Published in:

Molecular Biology & Evolution, 2018, v. 35, n. 3, p. 719, doi. 10.1093/molbev/msx304

By:

Wymant, Chris;
Hall, Matthew;
Ratmann, Oliver;
Bonsall, David;
Golubchik, Tanya;
Cesare, Mariateresa de;
Gall, Astrid;
Cornelissen, Marion;
Fraser, Christophe;
Consortium, STOP-HCV

Publication type:

Article

IVA: accurate de novo assembly of RNA virus genomes.

Published in:

Bioinformatics, 2015, v. 31, n. 14, p. 2374, doi. 10.1093/bioinformatics/btv120

By:

Hunt, Martin;
Gall, Astrid;
Swee Hoe Ong;
Brener, Jacqui;
Ferns, Bridget;
Goulder, Philip;
Nastouli, Eleni;
Keane, Jacqueline A.;
Kellam, Paul;
Otto, Thomas D.

Publication type:

Article

Ensembl COVID-19 resource: ongoing integration of public SARS-CoV-2 data.

Published in:

Nucleic Acids Research, 2022, v. 50, n. D1, p. D765, doi. 10.1093/nar/gkab889

By:

De Silva, Nishadi H;
Bhai, Jyothish;
Chakiachvili, Marc;
Contreras-Moreira, Bruno;
Cummins, Carla;
Frankish, Adam;
Gall, Astrid;
Genez, Thiago;
Howe, Kevin L;
Hunt, Sarah E;
Martin, Fergal J;
Moore, Benjamin;
Ogeh, Denye;
Parker, Anne;
Parton, Andrew;
Ruffier, Magali;
Sakthivel, Manoj Pandian;
Sheppard, Dan;
Tate, John;
Thormann, Anja

Publication type:

Article

Ensembl 2020.

Published in:

Nucleic Acids Research, 2020, v. 48, n. D1, p. D682, doi. 10.1093/nar/gkz966

By:

Yates, Andrew D;
Achuthan, Premanand;
Akanni, Wasiu;
Allen, James;
Allen, Jamie;
Alvarez-Jarreta, Jorge;
Amode, M Ridwan;
Armean, Irina M;
Azov, Andrey G;
Bennett, Ruth;
Bhai, Jyothish;
Billis, Konstantinos;
Boddu, Sanjay;
Marugán, José Carlos;
Cummins, Carla;
Davidson, Claire;
Dodiya, Kamalkumar;
Fatima, Reham;
Gall, Astrid;
Giron, Carlos Garcia

Publication type:

Article

Ensembl Genomes 2020—enabling non-vertebrate genomic research.

Published in:

Nucleic Acids Research, 2020, v. 48, n. D1, p. D689, doi. 10.1093/nar/gkz890

By:

Howe, Kevin L;
Contreras-Moreira, Bruno;
De Silva, Nishadi;
Maslen, Gareth;
Akanni, Wasiu;
Allen, James;
Alvarez-Jarreta, Jorge;
Barba, Matthieu;
Bolser, Dan M;
Cambell, Lahcen;
Carbajo, Manuel;
Chakiachvili, Marc;
Christensen, Mikkel;
Cummins, Carla;
Cuzick, Alayne;
Davis, Paul;
Fexova, Silvie;
Gall, Astrid;
George, Nancy;
Gil, Laurent

Publication type:

Article

Ensembl 2019.

Published in:

Nucleic Acids Research, 2019, v. 47, n. D1, p. D745, doi. 10.1093/nar/gky1113

By:

Cunningham, Fiona;
Achuthan, Premanand;
Akanni, Wasiu;
Allen, James;
Amode, M Ridwan;
Armean, Irina M;
Bennett, Ruth;
Bhai, Jyothish;
Billis, Konstantinos;
Boddu, Sanjay;
Cummins, Carla;
Davidson, Claire;
Dodiya, Kamalkumar Jayantilal;
Gall, Astrid;
Girón, Carlos García;
Gil, Laurent;
Grego, Tiago;
Haggerty, Leanne;
Haskell, Erin;
Hourlier, Thibaut

Publication type:

Article

Ensembl 2018.

Published in:

Nucleic Acids Research, 2018, v. 46, n. D1, p. D754, doi. 10.1093/nar/gkx1098

By:

Zerbino, Daniel R;
Achuthan, Premanand;
Akanni, Wasiu;
Amode, M Ridwan;
Barrell, Daniel;
Bhai, Jyothish;
Billis, Konstantinos;
Cummins, Carla;
Gall, Astrid;
Girón, Carlos García

Publication type:

Article

Phylogenetic estimation of the viral fitness landscape of HIV-1 set-point viral load.

Published in:

Virus Evolution, 2022, v. 8, n. 1, p. 1, doi. 10.1093/ve/veac022

By:

Zhao, Lele;
Wymant, Chris;
Blanquart, François;
Golubchik, Tanya;
Gall, Astrid;
Bakker, Margreet;
Bezemer, Daniela;
Hall, Matthew;
Ong, Swee Hoe;
Albert, Jan;
Bannert, Norbert;
Fellay, Jacques;
Grabowski, M Kate;
Gunsenheimer-Bartmeyer, Barbara;
Günthard, Huldrych F;
Kivelä, Pia;
Kouyos, Roger D;
Laeyendecker, Oliver;
Meyer, Laurence;
Porter, Kholoud

Publication type:

Article

Pervasive and non-random recombination in near full-length HIV genomes from Uganda.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa004

By:

Grant, Heather E;
Hodcroft, Emma B;
Ssemwanga, Deogratius;
Kitayimbwa, John M;
Yebra, Gonzalo;
Gomez, Luis Roger Esquivel;
Frampton, Dan;
Gall, Astrid;
Kellam, Paul;
Oliveira, Tulio de;
Bbosa, Nicholas;
Nsubuga, Rebecca N;
Kibengo, Freddie;
Kwan, Tsz Ho;
Lycett, Samantha;
Kao, Rowland;
Robertson, David L;
Ratmann, Oliver;
Fraser, Christophe;
Pillay, Deenan

Publication type:

Article

Host Genetic Variants and Gene Expression Patterns Associated with Epstein-Barr Virus Copy Number in Lymphoblastoid Cell Lines.

Published in:

PLoS ONE, 2014, v. 9, n. 10, p. 1, doi. 10.1371/journal.pone.0108384

By:

Houldcroft, Charlotte J.;
Petrova, Velislava;
Liu, Jimmy Z.;
Frampton, Dan;
Anderson, Carl A.;
Gall, Astrid;
Kellam, Paul

Publication type:

Article

Disease progression despite protective HLA expression in an HIV-infected transmission pair.

Published in:

Retrovirology, 2015, v. 12, n. 1, p. 1, doi. 10.1186/s12977-015-0179-z

By:

Brener, Jacqui;
Gall, Astrid;
Batorsky, Rebecca;
Riddell, Lynn;
Buus, Soren;
Leitman, Ellen;
Kellam, Paul;
Allen, Todd;
Goulder, Philip;
Matthews, Philippa C.

Publication type:

Article

Restriction of V3 region sequence divergence in the HIV-1 envelope gene during antiretroviral treatment in a cohort of recent seroconverters.

Published in:

Retrovirology, 2013, v. 10, n. 1, p. 1, doi. 10.1186/1742-4690-10-8

By:

Gall, Astrid;
Kaye, Steve;
Hué, Stéphane;
Bonsall, David;
Rance, Richard;
Baillie, Gregory J.;
Fidler, Sarah J.;
Weber, Jonathan N.;
McClure, Myra O.;
Kellam, Paul

Publication type:

Article

Disease-associated XMRV sequences are consistent with laboratory contamination.

Published in:

Retrovirology, 2010, v. 7, p. 111, doi. 10.1186/1742-4690-7-111

By:

Hué, Stéphane;
Gray, Eleanor R.;
Gall, Astrid;
Katzourakis, Aris;
Choon Ping Tan;
Houldcroft, Charlotte J.;
McLaren, Stuart;
Pillay, Deenan;
Futreal, Andrew;
Garson, Jeremy A.;
Pybus, Oliver G.;
Kellam, Paul;
Towers, Greg J.

Publication type:

Article

Coalescent Inference Using Serially Sampled, High-Throughput Sequencing Data from Intrahost HIV Infection.

Published in:

Genetics, 2016, v. 202, n. 4, p. 1449, doi. 10.1534/genetics.115.177931

By:

Dialdestoro, Kevin;
Sibbesen, Jonas Andreas;
Maretty, Lasse;
Raghwani, Jayna;
Gall, Astrid;
Kellam, Paul;
Pybus, Oliver G.;
Hein, Jotun;
Jenkins, Paul A.

Publication type:

Article

Correction: Viral genetic variation accounts for a third of variability in HIV-1 set-point viral load in Europe.

Published in:

2017

By:

Blanquart, François;
Wymant, Chris;
Cornelissen, Marion;
Gall, Astrid;
Bakker, Margreet;
Bezemer, Daniela;
Hall, Matthew;
Hillebregt, Mariska;
Ong, Swee Hoe;
Albert, Jan;
Bannert, Norbert;
Fellay, Jacques;
Fransen, Katrien;
Gourlay, Annabelle J.;
Grabowski, M. Kate;
Gunsenheimer-Bartmeyer, Barbara;
Günthard, Huldrych F.;
Kivelä, Pia;
Kouyos, Roger;
Laeyendecker, Oliver

Publication type:

Correction Notice

Viral genetic variation accounts for a third of variability in HIV-1 set-point viral load in Europe.

Published in:

PLoS Biology, 2017, v. 15, n. 6, p. 1, doi. 10.1371/journal.pbio.2001855

By:

Blanquart, François;
Wymant, Chris;
Cornelissen, Marion;
Gall, Astrid;
Bakker, Margreet;
Bezemer, Daniela;
Hall, Matthew;
Hillebregt, Mariska;
Ong, Swee Hoe;
Albert, Jan;
Bannert, Norbert;
Fellay, Jacques;
Fransen, Katrien;
Gourlay, Annabelle J.;
Grabowski, M. Kate;
Gunsenheimer-Bartmeyer, Barbara;
Günthard, Huldrych F.;
Kivelä, Pia;
Kouyos, Roger;
Laeyendecker, Oliver

Publication type:

Article

Frequency matters: comparison of drug resistance mutation detection by Sanger and next-generation sequencing in HIV-1.

Published in:

Journal of Antimicrobial Chemotherapy (JAC), 2023, v. 78, n. 3, p. 656, doi. 10.1093/jac/dkac430

By:

Balakrishna, Suraj;
Loosli, Tom;
Zaheri, Maryam;
Frischknecht, Paul;
Huber, Michael;
Kusejko, Katharina;
Yerly, Sabine;
Leuzinger, Karoline;
Perreau, Matthieu;
Ramette, Alban;
Wymant, Chris;
Fraser, Christophe;
Kellam, Paul;
Gall, Astrid;
Hirsch, Hans H;
Stoeckle, Marcel;
Rauch, Andri;
Cavassini, Matthias;
Bernasconi, Enos;
Notter, Julia

Publication type:

Article

Inferring HIV-1 transmission networks and sources of epidemic spread in Africa with deep-sequence phylogenetic analysis.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-09139-4

By:

Ratmann, Oliver;
Grabowski, M. Kate;
Hall, Matthew;
Golubchik, Tanya;
Wymant, Chris;
Abeler-Dörner, Lucie;
Bonsall, David;
Hoppe, Anne;
Brown, Andrew Leigh;
de Oliveira, Tulio;
Gall, Astrid;
Kellam, Paul;
Pillay, Deenan;
Kagaayi, Joseph;
Kigozi, Godfrey;
Quinn, Thomas C.;
Wawer, Maria J.;
Laeyendecker, Oliver;
Serwadda, David;
Gray, Ronald H.

Publication type:

Article