Works by GRAMMER, AMRIE C.

Results: 24

Gene expression analysis delineates the potential roles of multiple interferons in systemic lupus erythematosus.

Published in:

Communications Biology, 2019, v. 2, n. 1, p. N.PAG, doi. 10.1038/s42003-019-0382-x

By:

Catalina, Michelle D.;
Bachali, Prathyusha;
Geraci, Nicholas S.;
Grammer, Amrie C.;
Lipsky, Peter E.

Publication type:

Article

Comprehensive transcriptomic analysis of COVID-19 blood, lung, and airway.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-86002-x

By:

Daamen, Andrea R.;
Bachali, Prathyusha;
Owen, Katherine A.;
Kingsmore, Kathryn M.;
Hubbard, Erika L.;
Labonte, Adam C.;
Robl, Robert;
Shrotri, Sneha;
Grammer, Amrie C.;
Lipsky, Peter E.

Publication type:

Article

Analysis of gene expression from systemic lupus erythematosus synovium reveals myeloid cell-driven pathogenesis of lupus arthritis.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-74391-4

By:

Hubbard, Erika L.;
Catalina, Michelle D.;
Heuer, Sarah;
Bachali, Prathyusha;
Robl, Robert;
Geraci, Nicholas S.;
Grammer, Amrie C.;
Lipsky, Peter E.

Publication type:

Article

Molecular mechanisms governing the progression of nephritis in lupus prone mice and human lupus patients.

Published in:

Frontiers in Immunology, 2023, v. 14, p. 1, doi. 10.3389/fimmu.2023.1147526

By:

Daamen, Andrea R.;
Hongyang Wang;
Bachali, Prathyusha;
Nan Shen;
Kingsmore, Kathryn M.;
Robl, Robert D.;
Grammer, Amrie C.;
Shu Man Fu;
Lipsky, Peter E.

Publication type:

Article

COVID-19 patients exhibit unique transcriptional signatures indicative of disease severity.

Published in:

Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.989556

By:

Daamen, Andrea R.;
Bachali, Prathyusha;
Bonham, Catherine A.;
Somerville, Lindsay;
Sturek, Jeffrey M.;
Grammer, Amrie C.;
Kadl, Alexandra;
Lipsky, Peter E.

Publication type:

Article

Gut Microbiota and Bacterial DNA Suppress Autoimmunity by Stimulating Regulatory B Cells in a Murine Model of Lupus.

Published in:

Frontiers in Immunology, 2020, v. 11, p. N.PAG, doi. 10.3389/fimmu.2020.593353

By:

Mu, Qinghui;
Edwards, Michael R.;
Swartwout, Brianna K.;
Cabana Puig, Xavier;
Mao, Jiangdi;
Zhu, Jing;
Grieco, Joe;
Cecere, Thomas E.;
Prakash, Meeta;
Reilly, Christopher M.;
Puglisi, Christopher;
Bachali, Prathyusha;
Grammer, Amrie C.;
Lipsky, Peter E.;
Luo, Xin M.

Publication type:

Article

Selective Histone Deacetylase 6 Inhibition Normalizes B Cell Activation and Germinal Center Formation in a Model of Systemic Lupus Erythematosus.

Published in:

Frontiers in Immunology, 2019, v. 10, p. 1, doi. 10.3389/fimmu.2019.02512

By:

Ren, Jingjing;
Catalina, Michelle D.;
Eden, Kristin;
Liao, Xiaofeng;
Read, Kaitlin A.;
Luo, Xin;
McMillan, Ryan P.;
Hulver, Matthew W.;
Jarpe, Matthew;
Bachali, Prathyusha;
Grammer, Amrie C.;
Lipsky, Peter E.;
Reilly, Christopher M.

Publication type:

Article

Identification and Characterization of Post-activated B Cells in Systemic Autoimmune Diseases.

Published in:

Frontiers in Immunology, 2019, p. 1, doi. 10.3389/fimmu.2019.02136

By:

Weißenberg, Sarah Y.;
Szelinski, Franziska;
Schrezenmeier, Eva;
Stefanski, Ana-Luisa;
Wiedemann, Annika;
Rincon-Arevalo, Hector;
Welle, Anna;
Jungmann, Annemarie;
Nordström, Karl;
Walter, Jörn;
Imgenberg-Kreuz, Juliana;
Nordmark, Gunnel;
Rönnblom, Lars;
Bachali, Prathyusha;
Catalina, Michelle D.;
Grammer, Amrie C.;
Lipsky, Peter E.;
Lino, Andreia C.;
Dörner, Thomas

Publication type:

Article

Examination of the shared genetic architecture between multiple sclerosis and systemic lupus erythematosus facilitates discovery of novel lupus risk loci.

Published in:

Human Genetics, 2024, v. 143, n. 5, p. 703, doi. 10.1007/s00439-024-02672-3

By:

Kerns, Sophia;
Owen, Katherine A.;
Schwalbe, Dana;
Grammer, Amrie C.;
Lipsky, Peter E.

Publication type:

Article

Identification of alterations in macrophage activation associated with disease activity in systemic lupus erythematosus.

Published in:

PLoS ONE, 2018, v. 13, n. 12, p. 1, doi. 10.1371/journal.pone.0208132

By:

Labonte, Adam C.;
Kegerreis, Brian;
Geraci, Nicholas S.;
Bachali, Prathyusha;
Madamanchi, Sushma;
Robl, Robert;
Catalina, Michelle D.;
Lipsky, Peter E.;
Grammer, Amrie C.

Publication type:

Article

Machine learning approaches to predict lupus disease activity from gene expression data.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-45989-0

By:

Kegerreis, Brian;
Catalina, Michelle D.;
Bachali, Prathyusha;
Geraci, Nicholas S.;
Labonte, Adam C.;
Zeng, Chen;
Stearrett, Nathaniel;
Crandall, Keith A.;
Lipsky, Peter E.;
Grammer, Amrie C.

Publication type:

Article

Analysis of CD40-CD40 Ligand Interactions in the Regulation of Human B Cell Function<sup>a</sup>.

Published in:

Annals of the New York Academy of Sciences, 1997, v. 815, n. 1, p. 372, doi. 10.1111/j.1749-6632.1997.tb52088.x

By:

LIPSKY, PETER E.;
ATTREP, JEANNE F.;
GRAMMER, AMRIE C.;
McILRAITH, MELISSA J.;
NISHIOKA, YUICHI

Publication type:

Article

The relationship between hepatic immunoglobulin production and CD154 expression in chronic liver diseases.

Published in:

Liver International, 2006, v. 26, n. 2, p. 187, doi. 10.1111/j.1478-3231.2005.01211.x

By:

Mayo, Marlyn J.;
Mosby, James M.;
Jeyarajah, Rohan;
Combes, Burton;
Khilnani, Smina;
Al-halimi, Maha;
Handem, Iorna;
Grammer, Amrie C.;
Lipsky, Peter E.

Publication type:

Article

Altered expression of genes controlling metabolism characterizes the tissue response to immune injury in lupus.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-93034-w

By:

Kingsmore, Kathryn M.;
Bachali, Prathyusha;
Catalina, Michelle D.;
Daamen, Andrea R.;
Heuer, Sarah E.;
Robl, Robert D.;
Grammer, Amrie C.;
Lipsky, Peter E.

Publication type:

Article

Classification of COVID-19 Patients into Clinically Relevant Subsets by a Novel Machine Learning Pipeline Using Transcriptomic Features.

Published in:

International Journal of Molecular Sciences, 2023, v. 24, n. 5, p. 4905, doi. 10.3390/ijms24054905

By:

Daamen, Andrea R.;
Bachali, Prathyusha;
Grammer, Amrie C.;
Lipsky, Peter E.

Publication type:

Article

The Impact of Protein Acetylation/Deacetylation on Systemic Lupus Erythematosus.

Published in:

International Journal of Molecular Sciences, 2018, v. 19, n. 12, p. 4007, doi. 10.3390/ijms19124007

By:

Ren, Jingjing;
Panther, Eric;
Liao, Xiaofeng;
Grammer, Amrie C.;
Lipsky, Peter E.;
Reilly, Chris M.

Publication type:

Article

Publisher Correction: Analysis of transcriptomic features reveals molecular endotypes of SLE with clinical implications.

Published in:

2023

By:

Hubbard, Erika L.;
Bachali, Prathyusha;
Kingsmore, Kathryn M.;
He, Yisha;
Catalina, Michelle D.;
Grammer, Amrie C.;
Lipsky, Peter E.

Publication type:

Correction Notice

Analysis of transcriptomic features reveals molecular endotypes of SLE with clinical implications.

Published in:

Genome Medicine, 2023, v. 15, n. 1, p. 1, doi. 10.1186/s13073-023-01237-9

By:

Hubbard, Erika L.;
Bachali, Prathyusha;
Kingsmore, Kathryn M.;
He, Yisha;
Catalina, Michelle D.;
Grammer, Amrie C.;
Lipsky, Peter E.

Publication type:

Article

Molecular Characterization of Circulating Plasma Cells in Patients with Active Systemic Lupus Erythematosus.

Published in:

PLoS ONE, 2012, v. 7, n. 9, p. 1, doi. 10.1371/journal.pone.0044362

By:

Lugar, Patricia L.;
Love, Cassandra;
Grammer, Amrie C.;
Dave, Sandeep S.;
Lipsky, Peter E.;
Kovats, Susan

Publication type:

Article

Molecular pathways identified from single nucleotide polymorphisms demonstrate mechanistic differences in systemic lupus erythematosus patients of Asian and European ancestry.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-32569-6

By:

Owen, Katherine A.;
Bell, Kristy A.;
Price, Andrew;
Bachali, Prathyusha;
Ainsworth, Hannah;
Marion, Miranda C.;
Howard, Timothy D.;
Langefeld, Carl D.;
Shen, Nan;
Yazdany, Jinoos;
Dall'era, Maria;
Grammer, Amrie C.;
Lipsky, Peter E.

Publication type:

Article

Abnormalities in intron retention characterize patients with systemic lupus erythematosus.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-31890-4

By:

Sun, Xiaoqian;
Liu, Zhichao;
Li, Zongzhu;
Zeng, Zhouhao;
Peng, Weiqun;
Zhu, Jun;
Zhao, Joel;
Zhu, Chenghao;
Zeng, Chen;
Stearrett, Nathaniel;
Crandall, Keith A.;
Bachali, Prathyusha;
Grammer, Amrie C.;
Lipsky, Peter E.

Publication type:

Article

Nucleic Acid-Sensing and Interferon-Inducible Pathways Show Differential Methylation in MZ Twins Discordant for Lupus and Overexpression in Independent Lupus Samples: Implications for Pathogenic Mechanism and Drug Targeting.

Published in:

Genes, 2021, v. 12, n. 12, p. 1898, doi. 10.3390/genes12121898

By:

Marion, Miranda C.;
Ramos, Paula S.;
Bachali, Prathyusha;
Labonte, Adam C.;
Zimmerman, Kip D.;
Ainsworth, Hannah C.;
Heuer, Sarah E.;
Robl, Robert D.;
Catalina, Michelle D.;
Kelly, Jennifer A.;
Howard, Timothy D.;
Lipsky, Peter E.;
Grammer, Amrie C.;
Langefeld, Carl D.

Publication type:

Article

Expression of Human Endogenous Retroviruses in Systemic Lupus Erythematosus: Multiomic Integration With Gene Expression.

Published in:

Frontiers in Immunology, 2021, v. 11, p. N.PAG, doi. 10.3389/fimmu.2021.661437

By:

Stearrett, Nathaniel;
Dawson, Tyson;
Rahnavard, Ali;
Bachali, Prathyusha;
Bendall, Matthew L.;
Zeng, Chen;
Caricchio, Roberto;
Pérez-Losada, Marcos;
Grammer, Amrie C.;
Lipsky, Peter E.;
Crandall, Keith A.

Publication type:

Article

Transcriptome and IgH Repertoire Analyses Show That CD11c<sup>hi</sup> B Cells Are a Distinct Population With Similarity to B Cells Arising in Autoimmunity and Infection.

Published in:

Frontiers in Immunology, 2021, v. 11, p. N.PAG, doi. 10.3389/fimmu.2021.649458

By:

Maul, Robert W.;
Catalina, Michelle D.;
Kumar, Varsha;
Bachali, Prathyusha;
Grammer, Amrie C.;
Wang, Shu;
Yang, William;
Hasni, Sarfaraz;
Ettinger, Rachel;
Lipsky, Peter E.;
Gearhart, Patricia J.

Publication type:

Article