Congruence between noise and plasticity in protein expression.
- Published in:
- Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-07594-2
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- Publication type:
- Article
Works matching AU Furusawa, Chikara
Results: 79
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Utilization of Saccharomyces cerevisiae recombinant strain incapable of both ethanol and glycerol biosynthesis for anaerobic bioproduction.
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- Applied Microbiology & Biotechnology, 2013, v. 97, n. 11, p. 4811, doi. 10.1007/s00253-013-4760-x
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- Publication type:
- Article
3
Reconstruction and verification of a genome-scale metabolic model for Synechocystis sp. PCC6803.
- Published in:
- Applied Microbiology & Biotechnology, 2011, v. 92, n. 2, p. 347, doi. 10.1007/s00253-011-3559-x
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- Publication type:
- Article
4
Investigation of phosphorylation status of OdhI protein during penicillin- and Tween 40-triggered glutamate overproduction by Corynebacterium glutamicum.
- Published in:
- Applied Microbiology & Biotechnology, 2011, v. 91, n. 1, p. 143, doi. 10.1007/s00253-011-3275-6
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- Publication type:
- Article
5
Saccharomyces cerevisiae and DNA microarray analyses: what did we learn from it for a better understanding and exploitation of yeast biotechnology?
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- Applied Microbiology & Biotechnology, 2010, v. 87, n. 2, p. 391, doi. 10.1007/s00253-010-2582-7
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- Publication type:
- Article
6
Investigating the effectiveness of DNA microarray analysis for identifying the genes involved in l-lactate production by Saccharomyces cerevisiae.
- Published in:
- Applied Microbiology & Biotechnology, 2009, v. 84, n. 6, p. 1149, doi. 10.1007/s00253-009-2209-z
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- Publication type:
- Article
7
Effect of odhA overexpression and odhA antisense RNA expression on Tween-40-triggered glutamate production by Corynebacterium glutamicum.
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- Applied Microbiology & Biotechnology, 2009, v. 81, n. 6, p. 1097, doi. 10.1007/s00253-008-1743-4
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- Publication type:
- Article
8
Extracting the hidden features in saline osmotic tolerance in Saccharomyces cerevisiae from DNA microarray data using the self-organizing map: biosynthesis of amino acids.
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- Applied Microbiology & Biotechnology, 2007, v. 75, n. 2, p. 415, doi. 10.1007/s00253-007-0837-8
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- Publication type:
- Article
9
Enhancement of K‐strategy evolution in histidine utilization using a container with compartments.
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- Genes to Cells, 2018, v. 23, n. 10, p. 893, doi. 10.1111/gtc.12640
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- Publication type:
- Article
10
Genetic properties underlying transcriptional variability across different perturbations.
- Published in:
- Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-57642-8
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- Publication type:
- Article
11
Stability in gene expression and body-plan development leads to evolutionary conservation.
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- EvoDevo, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13227-023-00208-w
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- Article
12
Loss of function of Hog1 improves glycerol assimilation in Saccharomyces cerevisiae.
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- World Journal of Microbiology & Biotechnology, 2023, v. 39, n. 10, p. 1, doi. 10.1007/s11274-023-03696-z
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- Publication type:
- Article
13
Acceleration of target production in co‐culture by enhancing intermediate consumption through adaptive laboratory evolution.
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- Biotechnology & Bioengineering, 2022, v. 119, n. 3, p. 936, doi. 10.1002/bit.28007
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- Publication type:
- Article
14
Application of adaptive laboratory evolution to overcome a flux limitation in an <italic>Escherichia coli</italic> production strain.
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- Biotechnology & Bioengineering, 2018, v. 115, n. 6, p. 1542, doi. 10.1002/bit.26568
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- Publication type:
- Article
15
Evolutionary Changes in DnaA-Dependent Chromosomal Replication in Cyanobacteria.
- Published in:
- Frontiers in Microbiology, 2020, v. 11, p. 1, doi. 10.3389/fmicb.2020.00786
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- Publication type:
- Article
16
Metabolic dynamics restricted by conserved carriers: Jamming and feedback.
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- PLoS Computational Biology, 2017, v. 13, n. 11, p. 1, doi. 10.1371/journal.pcbi.1005847
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- Publication type:
- Article
17
Integrated Metabolic Flux and Omics Analysis of Synechocystis sp. PCC 6803 under Mixotrophic and Photoheterotrophic Conditions.
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- Plant & Cell Physiology, 2014, v. 55, n. 9, p. 1605, doi. 10.1093/pcp/pcu091
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- Publication type:
- Article
18
Elevated Sporulation Efficiency in Fission Yeast Schizosaccharomyces japonicus Strains Isolated from Drosophila.
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- Journal of Fungi, 2021, v. 7, n. 5, p. 1, doi. 10.3390/jof7050350
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- Publication type:
- Article
19
Raman spectral signature reflects transcriptomic features of antibiotic resistance in Escherichia coli.
- Published in:
- Communications Biology, 2018, v. 1, n. 1, p. N.PAG, doi. 10.1038/s42003-018-0093-8
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- Publication type:
- Article
20
Laboratory Evolution of Antimicrobial Resistance in Bacteria to Develop Rational Treatment Strategies.
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- Antibiotics (2079-6382), 2024, v. 13, n. 1, p. 94, doi. 10.3390/antibiotics13010094
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- Publication type:
- Article
21
Inference of transcriptome signatures of Escherichia coli in long-term stationary phase.
- Published in:
- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-32525-4
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- Publication type:
- Article
22
Theoretical modeling reveals that regulatory T cells increase T-cell interaction with antigen-presenting cells for stable immune tolerance.
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- International Immunology, 2019, v. 31, n. 11, p. 743, doi. 10.1093/intimm/dxz043
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- Publication type:
- Article
23
Purifying selection enduringly acts on the sequence evolution of highly expressed proteins in Escherichia coli.
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- G3: Genes | Genomes | Genetics, 2022, v. 12, n. 11, p. 1, doi. 10.1093/g3journal/jkac235
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- Publication type:
- Article
24
Robust and Accurate Discrimination of Self/Non-Self Antigen Presentations by Regulatory T Cell Suppression.
- Published in:
- PLoS ONE, 2016, v. 11, n. 9, p. 1, doi. 10.1371/journal.pone.0163134
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- Publication type:
- Article
25
Comprehensive phenotypic analysis of single-gene deletion and overexpression strains of Saccharomyces cerevisiae.
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- Yeast, 2011, v. 28, n. 5, p. 349, doi. 10.1002/yea.1843
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- Publication type:
- Article
26
Phenotypic convergence in bacterial adaptive evolution to ethanol stress.
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- BMC Evolutionary Biology, 2015, v. 15, n. 1, p. 1, doi. 10.1186/s12862-015-0454-6
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- Publication type:
- Article
27
High-throughput identification of the sensitivities of an Escherichia coli ΔrecA mutant strain to various chemical compounds.
- Published in:
- Journal of Antibiotics, 2019, v. 72, n. 7, p. 566, doi. 10.1038/s41429-019-0160-5
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- Publication type:
- Article
28
Rare-event sampling analysis uncovers the fitness landscape of the genetic code.
- Published in:
- PLoS Computational Biology, 2023, v. 19, n. 4, p. 1, doi. 10.1371/journal.pcbi.1011034
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- Publication type:
- Article
29
Understanding and engineering alcohol-tolerant bacteria using OMICS technology.
- Published in:
- World Journal of Microbiology & Biotechnology, 2018, v. 34, n. 11, p. 1, doi. 10.1007/s11274-018-2542-4
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- Publication type:
- Article
30
Potential contribution of intrinsic developmental stability toward body plan conservation.
- Published in:
- BMC Biology, 2022, v. 20, n. 1, p. 1, doi. 10.1186/s12915-022-01276-5
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- Publication type:
- Article
31
Promoters Constrain Evolution of Expression Levels of Essential Genes in Escherichia coli.
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- Molecular Biology & Evolution, 2024, v. 41, n. 9, p. 1, doi. 10.1093/molbev/msae185
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- Publication type:
- Article
32
SCODE: an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation.
- Published in:
- Bioinformatics, 2017, v. 33, n. 15, p. 2314, doi. 10.1093/bioinformatics/btx194
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- Publication type:
- Article
33
FastPros: screening of reaction knockout strategies for metabolic engineering.
- Published in:
- Bioinformatics, 2014, v. 30, n. 7, p. 981, doi. 10.1093/bioinformatics/btt672
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- Publication type:
- Article
34
Model-based analysis of non-specific binding for background correction of high-density oligonucleotide microarrays.
- Published in:
- Bioinformatics, 2009, v. 25, n. 1, p. 36, doi. 10.1093/bioinformatics/btn570
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- Publication type:
- Article
35
An improved physico-chemical model of hybridization on high-density oligonucleotide microarrays.
- Published in:
- Bioinformatics, 2008, v. 24, n. 10, p. 1278, doi. 10.1093/bioinformatics/btn109
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- Publication type:
- Article
36
A deep learning approach for morphological feature extraction based on variational auto-encoder: an application to mandible shape.
- Published in:
- NPJ Systems Biology & Applications, 2023, v. 9, n. 1, p. 1, doi. 10.1038/s41540-023-00293-6
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- Publication type:
- Article
37
Perturbation-response analysis of in silico metabolic dynamics revealed hard-coded responsiveness in the cofactors and network sparsity.
- Published in:
- eLife, 2025, p. 1, doi. 10.7554/eLife.98800
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- Publication type:
- Article
38
Increased 3-hydroxypropionic acid production from glycerol, by modification of central metabolism in Escherichia coli.
- Published in:
- Microbial Cell Factories, 2014, v. 13, n. 1, p. 1, doi. 10.1186/1475-2859-13-64
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- Publication type:
- Article
39
Investigating the effects of perturbations to pgi and eno gene expression on central carbon metabolism in Escherichia coli using <sup>13</sup> C metabolic flux analysis.
- Published in:
- Microbial Cell Factories, 2012, v. 11, n. 1, p. 87, doi. 10.1186/1475-2859-11-87
- By:
- Publication type:
- Article
40
Study on roles of anaplerotic pathways in glutamate overproduction of Corynebacterium glutamicum by metabolic flux analysis.
- Published in:
- Microbial Cell Factories, 2007, v. 6, p. 1, doi. 10.1186/1475-2859-6-19
- By:
- Publication type:
- Article
41
Bacterial transcript reorganization in thermal adaptive evolution.
- Published in:
- BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/s12864-015-1999-x
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- Publication type:
- Article
42
Quantitative analysis of relationship between mutation rate and speed of adaptation under antibiotic exposure in Escherichia coli.
- Published in:
- PLoS Genetics, 2025, v. 21, n. 3, p. 1, doi. 10.1371/journal.pgen.1011627
- By:
- Publication type:
- Article
43
Improvement of L-Lactate Production by CYB2 Gene Disruption in a Recombinant Saccharomyces cerevisiae Strain under Low pH Condition.
- Published in:
- Bioscience, Biotechnology & Biochemistry, 2008, v. 72, n. 11, p. 3063, doi. 10.1271/bbb.80493
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- Publication type:
- Article
44
Single cell analysis reveals a biophysical aspect of collective cell-state transition in embryonic stem cell differentiation.
- Published in:
- Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-30461-2
- By:
- Publication type:
- Article
45
Time-programmable drug dosing allows the manipulation, suppression and reversal of antibiotic drug resistance in vitro.
- Published in:
- Nature Communications, 2017, v. 8, n. 6, p. 1, doi. 10.1038/ncomms15589
- By:
- Publication type:
- Article
46
Prediction of antibiotic resistance by gene expression profiles.
- Published in:
- Nature Communications, 2014, v. 5, n. 12, p. 5792, doi. 10.1038/ncomms6792
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- Publication type:
- Article
47
Consistency principle in biological dynamical systems.
- Published in:
- Theory in Biosciences, 2008, v. 127, n. 2, p. 195, doi. 10.1007/s12064-008-0034-z
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- Publication type:
- Article
48
An in silico platform for the design of heterologous pathways in nonnative metabolite production.
- Published in:
- BMC Bioinformatics, 2012, v. 13, n. 1, p. 93, doi. 10.1186/1471-2105-13-93
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- Publication type:
- Article
49
Pluripotency, Differentiation, and Reprogramming: A Gene Expression Dynamics Model with Epigenetic Feedback Regulation.
- Published in:
- PLoS Computational Biology, 2015, v. 11, n. 8, p. 1, doi. 10.1371/journal.pcbi.1004476
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- Publication type:
- Article
50
A Generic Mechanism for Adaptive Growth Rate Regulation.
- Published in:
- PLoS Computational Biology, 2008, v. 4, n. 1, p. e3, doi. 10.1371/journal.pcbi.0040003
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- Publication type:
- Article