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Combinatorial Markers of Mild Cognitive Impairment Conversion to Alzheimer's Disease - Cytokines and MRI Measures Together Predict Disease Progression.
Published in:
Journal of Alzheimer's Disease, 2011, v. 26, p. 395, doi. 10.3233/JAD-2011-0044
By:
- Ashford;
- Rosen;
- Adamson;
- Bayley;
- Sabri;
- Furst;
- Black;
- Weiner;
- Furney, Simon J.;
- Simmons, Andrew;
- Güntert, Andreas;
- Dobson, Richard J.;
- Proitsi, Petroula;
- Lovestone, Simon;
- Kronenberg, Deborah;
- Wahlund, Lars Olof;
- Kloszewska, Iwona;
- Mecocci, Patrizia;
- Soininen, Hilkka;
- Tsolaki, Magda
Publication type:
Article
Combinatorial Markers of Mild Cognitive Impairment Conversion to Alzheimer's Disease - Cytokines and MRI Measures Together Predict Disease Progression.
Published in:
Journal of Alzheimer's Disease, 2011, v. 26, p. 395
By:
- Ashford, J. Wesson;
- Rosen, Allyson;
- Adamson, Maheen;
- Bayley, Peter;
- Sabri, Osama;
- Furst, Ansgar;
- Black, Sandra E.;
- Weiner, Michael;
- Furney, Simon J.;
- Kronenberg, Deborah;
- Simmons, Andrew;
- Güntert, Andreas;
- Dobson, Richard J.;
- Proitsi, Petroula;
- Wahlund, Lars Olof;
- Kloszewska, Iwona;
- Mecocci, Patrizia;
- Soininen, Hilkka;
- Tsolaki, Magda;
- Vellas, Bruno
Publication type:
Article
Combinatorial markers of mild cognitive impairment conversion to Alzheimer's disease--cytokines and MRI measures together predict disease progression.
Published in:
2011
By:
- Furney, Simon J;
- Kronenberg, Deborah;
- Simmons, Andrew;
- Güntert, Andreas;
- Dobson, Richard J;
- Proitsi, Petroula;
- Wahlund, Lars Olof;
- Kloszewska, Iwona;
- Mecocci, Patrizia;
- Soininen, Hilkka;
- Tsolaki, Magda;
- Vellas, Bruno;
- Spenger, Christian;
- Lovestone, Simon
Publication type:
journal article
Genome Sequencing of Multiple Primary Lung Cancers Harbouring Mixed Histology and Spontaneously Regressing Small-Cell Lung Cancer.
Published in:
Journal of Personalized Medicine, 2024, v. 14, n. 3, p. 257, doi. 10.3390/jpm14030257
By:
- Thomas, Valentina;
- Rashed, Ahmed;
- Faul, Clare;
- Nicholson, Siobhan;
- Young, Vincent;
- Hanson, John;
- Hennessy, Bryan T.;
- Toomey, Sinead;
- Furney, Simon J.
Publication type:
Article
Tumour Genome Characterization of a Rare Case of Pulmonary Enteric Adenocarcinoma and Prior Colon Adenocarcinoma.
Published in:
Journal of Personalized Medicine, 2021, v. 11, n. 8, p. 768, doi. 10.3390/jpm11080768
By:
- Smyth, Robert J.;
- Thomas, Valentina;
- Fay, Joanna;
- Ryan, Ronan;
- Nicholson, Siobhan;
- Morgan, Ross K.;
- Grogan, Liam;
- Breathnach, Oscar;
- Morris, Patrick G.;
- Toomey, Sinead;
- Hennessy, Bryan T.;
- Furney, Simon J.
Publication type:
Article
Onco-STS: a web-based laboratory information management system for sample and analysis tracking in oncogenomic experiments.
Published in:
Source Code for Biology & Medicine, 2014, v. 9, n. 1, p. 1, doi. 10.1186/s13029-014-0025-z
By:
- Gavrielides, Mike;
- Furney, Simon J.;
- Yates, Tim;
- Miller, Crispin J.;
- Marais, Richard
Publication type:
Article
Prioritization of candidate cancer genes—an aid to oncogenomic studies.
Published in:
Nucleic Acids Research, 2008, v. 36, n. 18, p. e115, doi. 10.1093/nar/gkn482
By:
- Furney, Simon J.;
- Calvo, Borja;
- Larrañaga, Pedro;
- Lozano, Jose A.;
- Lopez-Bigas, Nuria
Publication type:
Article
Mapping molecular subtype specific alterations in breast cancer brain metastases identifies clinically relevant vulnerabilities.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-27987-5
By:
- Cosgrove, Nicola;
- Varešlija, Damir;
- Keelan, Stephen;
- Elangovan, Ashuvinee;
- Atkinson, Jennifer M.;
- Cocchiglia, Sinéad;
- Bane, Fiona T.;
- Singh, Vikrant;
- Furney, Simon;
- Hu, Chunling;
- Carter, Jodi M.;
- Hart, Steven N.;
- Yadav, Siddhartha;
- Goetz, Matthew P.;
- Hill, Arnold D. K.;
- Oesterreich, Steffi;
- Lee, Adrian V.;
- Couch, Fergus J.;
- Young, Leonie S.
Publication type:
Article
Ultraviolet light-induced collagen degradation inhibits melanoma invasion.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22953-z
By:
- Budden, Timothy;
- Gaudy-Marqueste, Caroline;
- Porter, Andrew;
- Kay, Emily;
- Gurung, Shilpa;
- Earnshaw, Charles H.;
- Roeck, Katharina;
- Craig, Sarah;
- Traves, Víctor;
- Krutmann, Jean;
- Muller, Patricia;
- Motta, Luisa;
- Zanivan, Sara;
- Malliri, Angeliki;
- Furney, Simon J.;
- Nagore, Eduardo;
- Virós, Amaya
Publication type:
Article
Truncation- and motif-based pan-cancer analysis reveals tumor-suppressing kinases.
Published in:
Science Signaling, 2018, v. 11, n. 526, p. 1, doi. 10.1126/scisignal.aan6776
By:
- Hudson, Andrew M.;
- Stephenson, Natalie L.;
- Li, Cynthia;
- Trotter, Eleanor;
- Fletcher, Adam J.;
- Katona, Gitta;
- Bieniasz-Krzywiec, Patrycja;
- Howell, Matthew;
- Wirth, Chris;
- Furney, Simon;
- Miller, Crispin J.;
- Brognard, John
Publication type:
Article
Genome sequencing of mucosal melanomas reveals that they are driven by distinct mechanisms from cutaneous melanoma.
Published in:
Journal of Pathology, 2013, v. 230, n. 3, p. 261, doi. 10.1002/path.4204
By:
- Furney, Simon J;
- Turajlic, Samra;
- Stamp, Gordon;
- Nohadani, Mahrokh;
- Carlisle, Anna;
- Thomas, J Meirion;
- Hayes, Andrew;
- Strauss, Dirk;
- Gore, Martin;
- van den Oord, Joost;
- Larkin, James;
- Marais, Richard
Publication type:
Article
A whole-genome massively parallel sequencing analysis of BRCA1 mutant oestrogen receptor-negative and -positive breast cancers.
Published in:
Journal of Pathology, 2012, v. 227, n. 1, p. 29, doi. 10.1002/path.4003
By:
- Natrajan, Rachael;
- Mackay, Alan;
- Lambros, Maryou B;
- Weigelt, Britta;
- Wilkerson, Paul M;
- Manie, Elodie;
- Grigoriadis, Anita;
- A'Hern, Roger;
- van der Groep, Petra;
- Kozarewa, Iwanka;
- Popova, Tatiana;
- Mariani, Odette;
- Turajlic, Samra;
- Furney, Simon J;
- Marais, Richard;
- Rodruigues, Daniel-Nava;
- Flora, Adriana C;
- Wai, Patty;
- Pawar, Vidya;
- McDade, Simon
Publication type:
Article
Plasma inflammatory markers correlate with severity in Alzheimer's disease
Published in:
2010
By:
- Leung, Rufina;
- Simmons, Andy;
- Guntert, Andreas;
- Kronenberg, Deborah;
- Furney, Simon J.;
- Pritchard, Megan;
- Tsolaki, Magda;
- Mecocci, Patrizia;
- Kloszewska, Iwona;
- Vellas, Bruno;
- Soininen, Hikka;
- Spenger, Christian;
- Wahlund, Lars-Olaf;
- Lovestone, Simon
Publication type:
Abstract
An Aβ transcription signature
Published in:
2010
By:
- Ribe, Elena M.;
- Killick, Richard;
- Al-Shawi, Raya;
- Malik, Bilal;
- Hooper, Claudie;
- Fernandes, Cathy;
- To, Alvina W.M.;
- Lin, Kuang;
- Furney, Simon;
- Anderton, Brian;
- Simons, J. Paul;
- Lovestone, Simon
Publication type:
Abstract
Expression of an Aβ transcription signature gene set in mouse and human brain
Published in:
2010
By:
- Killick, Richard;
- Ribe, Elena M.;
- Malik, Bilal;
- Al-Shawi, Raya;
- Furney, Simon;
- Hooper, Claudie;
- Lin, Kuang;
- To, Alvina W.M.;
- Lourdusamy, Anbarasu;
- Causevic, Mirsada;
- Dobson, Richard;
- Anderton, Brian H.;
- Simons, Paul;
- Lovestone, Simon
Publication type:
Abstract
IntOGen: integration and data mining of multidimensional oncogenomic data.
Published in:
2010
By:
- Gundem, Gunes;
- Perez-Llamas, Christian;
- Jene-Sanz, Alba;
- Kedzierska, Anna;
- Islam, Abul;
- Deu-Pons, Jordi;
- Furney, Simon J.;
- Lopez-Bigas, Nuria
Publication type:
Letter
Identification of coding and non-coding mutational hotspots in cancer genomes.
Published in:
BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-016-3420-9
By:
- Piraino, Scott W.;
- Furney, Simon J.
Publication type:
Article
Personalised mapping of tumour development in synchronous colorectal cancer patients.
Published in:
NPJ Genomic Medicine, 2020, v. 5, n. 1, p. 1, doi. 10.1038/s41525-020-0134-3
By:
- Thomas, Valentina;
- Cotter, Maura B.;
- Tosetto, Miriam;
- Khaw, Yi Ling;
- Geraghty, Robert;
- Winter, Desmond C.;
- Ryan, Elizabeth J.;
- Sheahan, Kieran;
- Furney, Simon J.
Publication type:
Article
Spatial Distribution of Private Gene Mutations in Clear Cell Renal Cell Carcinoma.
Published in:
Cancers, 2021, v. 13, n. 9, p. 2163, doi. 10.3390/cancers13092163
By:
- Moore, Ariane L.;
- Batavia, Aashil A.;
- Kuipers, Jack;
- Singer, Jochen;
- Burcklen, Elodie;
- Schraml, Peter;
- Beisel, Christian;
- Moch, Holger;
- Beerenwinkel, Niko;
- Furney, Simon J.
Publication type:
Article
Phase Ib Trial of Copanlisib, A Phosphoinositide-3 Kinase (PI3K) Inhibitor, with Trastuzumab in Advanced Pre-Treated HER2-Positive Breast Cancer "PantHER".
Published in:
Cancers, 2021, v. 13, n. 6, p. 1225, doi. 10.3390/cancers13061225
By:
- Keegan, Niamh M.;
- Furney, Simon J.;
- Walshe, Janice M.;
- Gullo, Giuseppe;
- Kennedy, M. John;
- Smith, Diarmuid;
- McCaffrey, John;
- Kelly, Catherine M.;
- Egan, Keith;
- Kerr, Jennifer;
- Given, Mark;
- O'Donovan, Peter;
- Hernando, Andres;
- Teiserskiene, Ausra;
- Parker, Imelda;
- Kay, Elaine;
- Farrelly, Angela;
- Carr, Aoife;
- Calzaferri, Giulio;
- McDermott, Ray
Publication type:
Article
Differences in the evolutionary history of disease genes affected by dominant or recessive mutations.
Published in:
BMC Genomics, 2006, v. 7, p. 165, doi. 10.1186/1471-2164-7-165
By:
- Furney, Simon J;
- Alba, M Mar;
- Loz-Bigas, Nuia
Publication type:
Article
Structural and functional properties of genes involved in human cancer.
Published in:
BMC Genomics, 2006, v. 7, p. 3, doi. 10.1186/1471-2164-7-3
By:
- Furney, Simon J;
- Higgins, Desmond G;
- Ouzounis, Christos A;
- Lopez-Bigas, Nuria
Publication type:
Article
Frequency, impact and a preclinical study of novel ERBB gene family mutations in HER2-positive breast cancer.
Published in:
Therapeutic Advances in Medical Oncology, 2018, v. 10, n. 1, p. 1, doi. 10.1177/1758835918778297
By:
- Elster, Naomi;
- Toomey, Sinead;
- Fan, Yue;
- Cremona, Mattia;
- Morgan, Clare;
- Weiner Gorzel, Karolina;
- Bhreathnach, Una;
- Milewska, Malgorzata;
- Murphy, Madeline;
- Madden, Stephen;
- Naidoo, Jarushka;
- Fay, Joanna;
- Kay, Elaine;
- Carr, Aoife;
- Kennedy, Sean;
- Furney, Simon;
- Mezynski, Janusz;
- Breathhnach, Oscar;
- Morris, Patrick;
- Grogan, Liam
Publication type:
Article
In silico prioritisation of microRNA-associated common variants in multiple sclerosis.
Published in:
Human Genomics, 2023, v. 17, n. 1, p. 1, doi. 10.1186/s40246-023-00478-4
By:
- Fashina, Ifeolutembi A.;
- McCoy, Claire E.;
- Furney, Simon J.
Publication type:
Article
Mucinous adenocarcinoma of the colon and rectum: A genomic analysis.
Published in:
Journal of Surgical Oncology, 2019, v. 120, n. 8, p. 1427, doi. 10.1002/jso.25764
By:
- Reynolds, Ian S.;
- O'Connell, Emer;
- Fichtner, Michael;
- McNamara, Deborah A.;
- Kay, Elaine W.;
- Prehn, Jochen H. M.;
- Furney, Simon J.;
- Burke, John P.
Publication type:
Article
Whole-exome sequencing of long-term, never relapse exceptional responders of trastuzumab-treated HER2+ metastatic breast cancer.
Published in:
2020
By:
- Walsh, Naomi;
- Andrieu, Charlotte;
- O'Donovan, Peter;
- Quinn, Cecily;
- Maguire, Alanna;
- Furney, Simon J.;
- Gullo, Giuseppe;
- Crown, John
Publication type:
journal article
Corrigendum: Ultraviolet radiation accelerates BRAF-driven melanomagenesis by targeting TP53.
Published in:
Nature, 2015, v. 519, n. 7541, p. 118, doi. 10.1038/nature14057
By:
- Viros, Amaya;
- Sanchez-Laorden, Berta;
- Pedersen, Malin;
- Furney, Simon J.;
- Rae, Joel;
- Hogan, Kate;
- Ejiama, Sarah;
- Girotti, Maria Romina;
- Cook, Martin;
- Dhomen, Nathalie;
- Marais, Richard
Publication type:
Article
Ultraviolet radiation accelerates BRAF-driven melanomagenesis by targeting TP53.
Published in:
Nature, 2014, v. 511, n. 7510, p. 478, doi. 10.1038/nature13298
By:
- Viros, Amaya;
- Sanchez-Laorden, Berta;
- Pedersen, Malin;
- Furney, Simon J.;
- Rae, Joel;
- Hogan, Kate;
- Ejiama, Sarah;
- Girotti, Maria Romina;
- Cook, Martin;
- Dhomen, Nathalie;
- Marais, Richard
Publication type:
Article
Distinct Patterns in the Regulation and Evolution of Human Cancer Genes.
Published in:
In Silico Biology, 2008, v. 8, n. 1, p. 33
By:
- Furney, Simon J.;
- Madden, Stephen F.;
- Kisiel, Tomasz A.;
- Higgins, Desmond G.;
- Lopez-Bigas, Nuria
Publication type:
Article
The mutational burden of acral melanoma revealed by whole-genome sequencing and comparative analysis.
Published in:
Pigment Cell & Melanoma Research, 2014, v. 27, n. 5, p. 835, doi. 10.1111/pcmr.12279
By:
- Furney, Simon J.;
- Turajlic, Samra;
- Stamp, Gordon;
- Thomas, J. Meirion;
- Hayes, Andrew;
- Strauss, Dirk;
- Gavrielides, Mike;
- Xing, Wei;
- Gore, Martin;
- Larkin, James;
- Marais, Richard
Publication type:
Article
Genomic characterisation of acral melanoma cell lines.
Published in:
Pigment Cell & Melanoma Research, 2012, v. 25, n. 4, p. 488, doi. 10.1111/j.1755-148X.2012.01016.x
By:
- Furney, Simon J.;
- Turajlic, Samra;
- Fenwick, Kerry;
- Lambros, Maryou B.;
- MacKay, Alan;
- Ricken, Gerda;
- Mitsopoulos, Costas;
- Kozarewa, Iwanka;
- Hakas, Jarle;
- Zvelebil, Marketa;
- Lord, Christopher J.;
- Ashworth, Alan;
- Reis-Filho, Jorge S.;
- Herlyn, Meenhard;
- Murata, Hiroshi;
- Marais, Richard
Publication type:
Article
Germline single nucleotide polymorphisms in ERBB3 and BARD1 genes result in a worse relapse free survival response for HER2-positive breast cancer patients treated with adjuvant based docetaxel, carboplatin and trastuzumab (TCH).
Published in:
PLoS ONE, 2018, v. 13, n. 8, p. 1, doi. 10.1371/journal.pone.0200996
By:
- Coté, Damien;
- Eustace, Alex;
- Toomey, Sinead;
- Cremona, Mattia;
- Milewska, Malgorzata;
- Furney, Simon;
- Carr, Aoife;
- Fay, Joanna;
- Kay, Elaine;
- Kennedy, Susan;
- Crown, John;
- Hennessy, Bryan;
- Madden, Stephen
Publication type:
Article

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