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SLAM‐Drop‐seq reveals mRNA kinetic rates throughout the cell cycle.
- Published in:
- Molecular Systems Biology, 2023, v. 19, n. 10, p. 1, doi. 10.15252/msb.202211427
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- Publication type:
- Article
Viral infection reveals hidden sharing of TCR CDR3 sequences between individuals.
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- Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1199064
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- Publication type:
- Article
Correction of T-Cell Repertoire and Autoimmune Diabetes in NOD Mice by Non-myeloablative T-Cell Depleted Allogeneic HSCT.
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- Stem Cells Translational Medicine, 2023, v. 12, n. 5, p. 281, doi. 10.1093/stcltm/szad021
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- Publication type:
- Article
Modulating the proliferative and cytotoxic properties of patient-derived TIL by a synthetic immune niche of immobilized CCL21 and ICAM1.
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- Frontiers in Oncology, 2023, v. 13, p. 1, doi. 10.3389/fonc.2023.1116328
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- Article
Quantifying changes in the T cell receptor repertoire during thymic development.
- Published in:
- eLife, 2023, p. 1, doi. 10.7554/eLife.81622
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- Publication type:
- Article
A hierarchy of selection pressures determines the organization of the T cell receptor repertoire.
- Published in:
- Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.939394
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- Publication type:
- Article
Pediatric Hospitalizations After School Reopening During the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Alpha (B.1.1.7) Variant Spread: A Multicenter Cross-sectional Study in Israel.
- Published in:
- Clinical Infectious Diseases, 2022, v. 75, n. 1, p. e300, doi. 10.1093/cid/ciac065
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- Publication type:
- Article
Early sample tagging and pooling enables simultaneous SARS-CoV-2 detection and variant sequencing.
- Published in:
- Science Translational Medicine, 2021, v. 13, n. 618, p. 1, doi. 10.1126/scitranslmed.abj2266
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- Publication type:
- Article
NovoSpaRc: flexible spatial reconstruction of single-cell gene expression with optimal transport.
- Published in:
- Nature Protocols, 2021, v. 16, n. 9, p. 4177, doi. 10.1038/s41596-021-00573-7
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- Article
Avidity optimization of a MAGE‐A1‐specific TCR with somatic hypermutation.
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- European Journal of Immunology, 2021, v. 51, n. 6, p. 1505, doi. 10.1002/eji.202049007
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- Article
Author Correction: Deciphering eukaryotic gene-regulatory logic with 100 million random promoters.
- Published in:
- 2020
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- Publication type:
- Correction Notice
Selective flexible packaging pathways of the segmented genome of influenza A virus.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-18108-1
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- Publication type:
- Article
Deciphering eukaryotic gene-regulatory logic with 100 million random promoters.
- Published in:
- Nature Biotechnology, 2020, v. 38, n. 1, p. 56, doi. 10.1038/s41587-019-0315-8
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- Publication type:
- Article
Reliability of Neck Mass Point‐of‐Care Ultrasound by Pediatric Emergency Physicians.
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- Journal of Ultrasound in Medicine, 2019, v. 38, n. 11, p. 2893, doi. 10.1002/jum.14993
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- Article
Genetic screen of the yeast environmental stress response dynamics uncovers distinct regulatory phases.
- Published in:
- Molecular Systems Biology, 2019, v. 15, n. 8, p. N.PAG, doi. 10.15252/msb.20198939
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- Publication type:
- Article
EEG-Based Prediction of Cognitive Load in Intelligence Tests.
- Published in:
- Frontiers in Human Neuroscience, 2019, p. N.PAG, doi. 10.3389/fnhum.2019.00191
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- Publication type:
- Article
Molecular constraints on CDR3 for thymic selection of MHC-restricted TCRs from a random pre-selection repertoire.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-08906-7
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- Publication type:
- Article
Pediatric residents' simulation-based training in patient safety during sedation.
- Published in:
- 2018
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- Publication type:
- journal article
Predicting CD4 T-cell epitopes based on antigen cleavage, MHCII presentation, and TCR recognition.
- Published in:
- PLoS ONE, 2018, v. 13, n. 11, p. 1, doi. 10.1371/journal.pone.0206654
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- Publication type:
- Article
Expansion and Antitumor Cytotoxicity of T-Cells Are Augmented by Substrate-Bound CCL21 and Intercellular Adhesion Molecule 1.
- Published in:
- Frontiers in Immunology, 2018, p. 1, doi. 10.3389/fimmu.2018.01303
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- Publication type:
- Article
McPAS-TCR: a manually curated catalogue of pathology-associated T cell receptor sequences.
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- Bioinformatics, 2017, v. 33, n. 18, p. 2924, doi. 10.1093/bioinformatics/btx286
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- Publication type:
- Article
A synthetic biology approach to probing nucleosome symmetry.
- Published in:
- eLife, 2017, p. 1, doi. 10.7554/eLife.28836
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- Publication type:
- Article
Compositional and functional dynamics of the bovine rumen methanogenic community across different developmental stages.
- Published in:
- Environmental Microbiology, 2017, v. 19, n. 8, p. 3365, doi. 10.1111/1462-2920.13846
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- Publication type:
- Article
Specificity, Privacy, and Degeneracy in the CD4 T Cell Receptor Repertoire Following Immunization.
- Published in:
- Frontiers in Immunology, 2017, p. 1, doi. 10.3389/fimmu.2017.00430
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- Publication type:
- Article
Feature selection using a one dimensional naïve Bayes' classifier increases the accuracy of support vector machine classification of CDR3 repertoires.
- Published in:
- Bioinformatics, 2017, v. 33, n. 7, p. 951, doi. 10.1093/bioinformatics/btw771
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- Publication type:
- Article
Diet-induced changes of redox potential underlie compositional shifts in the rumen archaeal community.
- Published in:
- Environmental Microbiology, 2017, v. 19, n. 1, p. 174, doi. 10.1111/1462-2920.13551
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- Publication type:
- Article
Broad phylogeny and functionality of cellulosomal components in the bovine rumen microbiome.
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- Environmental Microbiology, 2017, v. 19, n. 1, p. 185, doi. 10.1111/1462-2920.13561
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- Publication type:
- Article
"The Girl who Grew Horns": Temporal Swelling as an Atypical Presenting Symptom of Epstein-Barr Virus Infection.
- Published in:
- Israel Medical Association Journal, 2016, v. 18, n. 12, p. 695
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- Publication type:
- Article
Wishbone identifies bifurcating developmental trajectories from single-cell data.
- Published in:
- Nature Biotechnology, 2016, v. 34, n. 6, p. 637, doi. 10.1038/nbt.3569
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- Publication type:
- Article
Post-childhood Presentation and Diagnosis of DiGeorge Syndrome.
- Published in:
- Clinical Pediatrics, 2016, v. 55, n. 4, p. 368, doi. 10.1177/0009922815591090
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- Publication type:
- Article
Clonal expansion under the microscope: studying lymphocyte activation and differentiation using live-cell imaging.
- Published in:
- Immunology & Cell Biology, 2016, v. 94, n. 3, p. 242, doi. 10.1038/icb.2015.104
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- Publication type:
- Article
Dynamic Perturbations of the T-Cell Receptor Repertoire in Chronic HIV Infection and following Antiretroviral Therapy.
- Published in:
- Frontiers in Immunology, 2016, p. 1, doi. 10.3389/fimmu.2015.00644
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- Publication type:
- Article
Universal Quake Statistics: From Compressed Nanocrystals to Earthquakes.
- Published in:
- Scientific Reports, 2015, p. 16493, doi. 10.1038/srep16493
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- Publication type:
- Article
Condition-specific genetic interaction maps reveal crosstalk between the cAMP/PKA and the HOG MAPK pathways in the activation of the general stress response.
- Published in:
- Molecular Systems Biology, 2015, v. 11, n. 10, p. 1, doi. 10.15252/msb.20156451
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- Publication type:
- Article
Clk post-transcriptional control denoises circadian transcription both temporally and spatially.
- Published in:
- Nature Communications, 2015, v. 6, n. 5, p. 7056, doi. 10.1038/ncomms8056
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- Publication type:
- Article
Tracking global changes induced in the CD4 T-cell receptor repertoire by immunization with a complex antigen using short stretches of CDR3 protein sequence.
- Published in:
- Bioinformatics, 2014, v. 30, n. 22, p. 3181, doi. 10.1093/bioinformatics/btu523
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- Publication type:
- Article
Dynamic and static maintenance of epigenetic memory in pluripotent and somatic cells.
- Published in:
- Nature, 2014, v. 513, n. 7516, p. 115, doi. 10.1038/nature13458
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- Publication type:
- Article
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation.
- Published in:
- Nature, 2014, v. 510, n. 7505, p. 363, doi. 10.1038/nature13437
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- Article
Do all creatures possess an acquired immune system of some sort?
- Published in:
- BioEssays, 2014, v. 36, n. 3, p. 273, doi. 10.1002/bies.201300124
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- Publication type:
- Article
CD4<sup>+</sup> T cell-receptor repertoire diversity is compromised in the spleen but not in the bone marrow of aged mice due to private and sporadic clonal expansions.
- Published in:
- Frontiers in Immunology, 2013, v. 4, p. 1, doi. 10.3389/fimmu.2013.00379
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- Publication type:
- Article
Mapping Differentiation under Mixed Culture Conditions Reveals a Tunable Continuum of T Cell Fates.
- Published in:
- PLoS Biology, 2013, v. 11, n. 7, p. 1, doi. 10.1371/journal.pbio.1001616
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- Article
Studying gene expression at the level of the single cell.
- Published in:
- Briefings in Functional Genomics, 2013, v. 12, n. 2, p. 73, doi. 10.1093/bfgp/elt013
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- Publication type:
- Article
Dynamic single-cell measurements of gene expression in primary lymphocytes: challenges, tools and prospects.
- Published in:
- Briefings in Functional Genomics, 2013, v. 12, n. 2, p. 99, doi. 10.1093/bfgp/els061
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- Publication type:
- Article
Systematic Dissection of Roles for Chromatin Regulators in a Yeast Stress Response.
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- PLoS Biology, 2012, v. 10, n. 7, p. 1, doi. 10.1371/journal.pbio.1001369
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- Publication type:
- Article
Gene expression: Running to stand still.
- Published in:
- Nature, 2012, v. 484, n. 7393, p. 171, doi. 10.1038/484171a
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- Publication type:
- Article
Balancing speed and accuracy of polyclonal T cell activation: a role for extracellular feedback.
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- BMC Systems Biology, 2012, v. 6, n. 1, p. 111, doi. 10.1186/1752-0509-6-111
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- Publication type:
- Article
A functional selection model explains evolutionary robustness despite plasticity in regulatory networks.
- Published in:
- Molecular Systems Biology, 2012, v. 8, n. 1, p. 1, doi. 10.1038/msb.2012.50
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- Publication type:
- Article
Physical Module Networks: an integrative approach for reconstructing transcription regulation.
- Published in:
- Bioinformatics, 2011, v. 27, n. 13, p. i177, doi. 10.1093/bioinformatics/btr222
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- Publication type:
- Article
An integrative clustering and modeling algorithm for dynamical gene expression data.
- Published in:
- Bioinformatics, 2011, v. 27, n. 13, p. i392, doi. 10.1093/bioinformatics/btr250
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- Publication type:
- Article
Full-length transcriptome assembly from RNA-Seq data without a reference genome.
- Published in:
- Nature Biotechnology, 2011, v. 29, n. 7, p. 644, doi. 10.1038/nbt.1883
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- Publication type:
- Article