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Guidelines for reporting single-cell RNA-seq experiments.
Published in:
2020
By:
- Füllgrabe, Anja;
- George, Nancy;
- Green, Matthew;
- Nejad, Parisa;
- Aronow, Bruce;
- Fexova, Silvie Korena;
- Fischer, Clay;
- Freeberg, Mallory Ann;
- Huerta, Laura;
- Morrison, Norman;
- Scheuermann, Richard H.;
- Taylor, Deanne;
- Vasilevsky, Nicole;
- Clarke, Laura;
- Gehlenborg, Nils;
- Kent, Jim;
- Marioni, John;
- Teichmann, Sarah;
- Brazma, Alvis;
- Papatheodorou, Irene
Publication type:
Letter
A Novel Long Non-Coding RNA in the hTERT Promoter Region Regulates hTERT Expression.
Published in:
Non-Coding RNA, 2018, v. 4, n. 1, p. 1, doi. 10.3390/ncrna4010001
By:
- Malhotra, Sanandan;
- Freeberg, Mallory A.;
- Winans, Shelby J.;
- Taylor, James;
- Beemon, Karen L.
Publication type:
Article
Sharing sensitive data in life sciences: an overview of centralized and federated approaches.
Published in:
Briefings in Bioinformatics, 2024, v. 25, n. 4, p. 1, doi. 10.1093/bib/bbae262
By:
- Rujano, Maria A;
- Boiten, Jan-Willem;
- Ohmann, Christian;
- Canham, Steve;
- Contrino, Sergio;
- David, Romain;
- Ewbank, Jonathan;
- Filippone, Claudia;
- Connellan, Claire;
- Custers, Ilse;
- Nuland, Rick van;
- Mayrhofer, Michaela Th;
- Holub, Petr;
- Álvarez, Eva García;
- Bacry, Emmanuel;
- Hughes, Nigel;
- Freeberg, Mallory A;
- Schaffhauser, Birgit;
- Wagener, Harald;
- Sánchez-Pla, Alex
Publication type:
Article
Pervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae.
Published in:
Genome Biology, 2013, v. 14, n. 2, p. 1, doi. 10.1186/gb-2013-14-2-r13
By:
- Freeberg, Mallory A.;
- Ting Han;
- Moresco, James J.;
- Kong, Andy;
- Yu-Cheng Yang;
- Zhi John Lu;
- Yates, John R.;
- Kim, John K.
Publication type:
Article
piRNAs and siRNAs collaborate in Caenorhabditis elegans genome defense
Published in:
Genome Biology, 2012, v. 13, n. 7, p. 164, doi. 10.1186/gb-2012-13-7-164
By:
- Billi, Allison C;
- Freeberg, Mallory A;
- Kim, John K
Publication type:
Article
EMBL's European Bioinformatics Institute (EMBL-EBI) in 2022.
Published in:
Nucleic Acids Research, 2023, v. 51, n. D1, p. D9, doi. 10.1093/nar/gkac1098
By:
- Thakur, Matthew;
- Bateman, Alex;
- Brooksbank, Cath;
- Freeberg, Mallory;
- Harrison, Melissa;
- Hartley, Matthew;
- Keane, Thomas;
- Kleywegt, Gerard;
- Leach, Andrew;
- Levchenko, Mariia;
- Morgan, Sarah;
- McDonagh, Ellen M;
- Orchard, Sandra;
- Papatheodorou, Irene;
- Velankar, Sameer;
- Vizcaino, Juan Antonio;
- Witham, Rick;
- Zdrazil, Barbara;
- McEntyre, Johanna
Publication type:
Article
European Genome-phenome Archive in 2021.
Published in:
Nucleic Acids Research, 2022, v. 50, n. D1, p. D980, doi. 10.1093/nar/gkab1059
By:
- Freeberg, Mallory Ann;
- Fromont, Lauren A;
- D'Altri, Teresa;
- Romero, Anna Foix;
- Ciges, Jorge Izquierdo;
- Jene, Aina;
- Kerry, Giselle;
- Moldes, Mauricio;
- Ariosa, Roberto;
- Bahena, Silvia;
- Barrowdale, Daniel;
- Barbero, Marcos Casado;
- Fernandez-Orth, Dietmar;
- Garcia-Linares, Carles;
- Garcia-Rios, Emilio;
- Haziza, Frédéric;
- Juhasz, Bela;
- Llobet, Oscar Martinez;
- Milla, Gemma;
- Mohan, Anand
Publication type:
Article
A Conserved Upstream Motif Orchestrates Autonomous, Germline-Enriched Expression of Caenorhabditis elegans piRNAs.
Published in:
PLoS Genetics, 2013, v. 9, n. 3, p. 1, doi. 10.1371/journal.pgen.1003392
By:
- Billi, Allison C.;
- Freeberg, Mallory A.;
- Day, Amanda M.;
- Sang Young Chun;
- Khivansara, Vishal;
- Kim, John K.
Publication type:
Article
The Caenorhabditis elegans HEN1 Ortholog, HENN-1, Methylates and Stabilizes Select Subclasses of Germline Small RNAs.
Published in:
PLoS Genetics, 2012, v. 8, n. 4, p. 1, doi. 10.1371/journal.pgen.1002617
By:
- Billi, Allison C.;
- Alessi, Amelia F.;
- Khivansara, Vishal;
- Ting Han;
- Freeberg, Mallory;
- Mitani, Shohei;
- Kim, John K.
Publication type:
Article

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