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p53 rapidly restructures 3D chromatin organization to trigger a transcriptional response.
- Published in:
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-46666-1
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- Publication type:
- Article
Cellular reprogramming is driven by widespread rewiring of promoter-enhancer interactions.
- Published in:
- BMC Biology, 2023, v. 21, n. 1, p. 1, doi. 10.1186/s12915-023-01766-0
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- Publication type:
- Article
Single cell Hi-C identifies plastic chromosome conformations underlying the gastrulation enhancer landscape.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-39549-4
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- Publication type:
- Article
Worshippers of the gods: debating paganism in the fourth-century Roman West.
- Published in:
- 2022
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- Publication type:
- Book Review
Short- and long-range cis interactions between integrated HPV genomes and cellular chromatin dysregulate host gene expression in early cervical carcinogenesis.
- Published in:
- PLoS Pathogens, 2021, v. 17, n. 8, p. 1, doi. 10.1371/journal.ppat.1009875
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- Publication type:
- Article
The global and promoter-centric 3D genome organization temporally resolved during a circadian cycle.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02374-3
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- Publication type:
- Article
High‐resolution three‐dimensional chromatin profiling of the Chinese hamster ovary cell genome.
- Published in:
- Biotechnology & Bioengineering, 2021, v. 118, n. 2, p. 784, doi. 10.1002/bit.27607
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- Publication type:
- Article
Transcription-dependent cohesin repositioning rewires chromatin loops in cellular senescence.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-19878-4
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- Publication type:
- Article
Analysis of chromatin organization and gene expression in T cells identifies functional genes for rheumatoid arthritis.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-18180-7
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- Publication type:
- Article
RNA proximity sequencing data and analysis pipeline from a human neuroblastoma nuclear transcriptome.
- Published in:
- Scientific Data, 2020, v. 7, n. 1, p. 1, doi. 10.1038/s41597-020-0372-3
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- Publication type:
- Article
An intergenic non-coding RNA promoter required for histone modifications in the human β-globin chromatin domain.
- Published in:
- PLoS ONE, 2019, v. 14, n. 8, p. 1, doi. 10.1371/journal.pone.0217532
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- Publication type:
- Article
RNA proximity sequencing reveals the spatial organization of the transcriptome in the nucleus.
- Published in:
- Nature Biotechnology, 2019, v. 37, n. 7, p. 793, doi. 10.1038/s41587-019-0166-3
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- Publication type:
- Article
Let's Call it Quits: Break‐Even Effects in the Decision to Stop Taking Risks.
- Published in:
- Risk Analysis: An International Journal, 2019, v. 39, n. 7, p. 1560, doi. 10.1111/risa.13264
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- Publication type:
- Article
Author Correction: Promoter interactome of human embryonic stem cell-derived cardiomyocytes connects GWAS regions to cardiac gene networks.
- Published in:
- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-07399-0
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- Publication type:
- Article
Genome organization and chromatin analysis identify transcriptional downregulation of insulin-like growth factor signaling as a hallmark of aging in developing B cells.
- Published in:
- Genome Biology, 2018, v. 19, n. 1, p. N.PAG, doi. 10.1186/s13059-018-1489-y
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- Publication type:
- Article
Promoter interactome of human embryonic stem cell-derived cardiomyocytes connects GWAS regions to cardiac gene networks.
- Published in:
- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-04931-0
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- Publication type:
- Article
Comparison of rider stability in a flapless saddle versus a conventional saddle.
- Published in:
- PLoS ONE, 2018, v. 13, n. 6, p. 1, doi. 10.1371/journal.pone.0196960
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- Publication type:
- Article
Towards an Understanding of the Origins of the Favourite–Longshot Bias: Evidence from Online Poker Markets, a Real‐money Natural Laboratory.
- Published in:
- Economica, 2018, v. 85, n. 338, p. 360, doi. 10.1111/ecca.12200
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- Publication type:
- Article
Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL, and PDS5 proteins.
- Published in:
- EMBO Journal, 2017, v. 36, n. 24, p. 3573, doi. 10.15252/embj.201798004
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- Publication type:
- Article
Chromosome contacts in activated T cells identify autoimmune disease candidate genes.
- Published in:
- Genome Biology, 2017, v. 18, p. 1, doi. 10.1186/s13059-017-1285-0
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- Publication type:
- Article
Hi-C as a tool for precise detection and characterisation of chromosomal rearrangements and copy number variation in human tumours.
- Published in:
- Genome Biology, 2017, v. 18, p. 1, doi. 10.1186/s13059-017-1253-8
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- Publication type:
- Article
GOTHiC, a probabilistic model to resolve complex biases and to identify real interactions in Hi-C data.
- Published in:
- PLoS ONE, 2017, v. 12, n. 4, p. 1, doi. 10.1371/journal.pone.0174744
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- Publication type:
- Article
Global reorganisation of cis-regulatory units upon lineage commitment of human embryonic stem cells.
- Published in:
- eLife, 2017, p. 1, doi. 10.7554/eLife.21926
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- Publication type:
- Article
Identifying Causal Genes at the Multiple Sclerosis Associated Region 6q23 Using Capture Hi-C.
- Published in:
- PLoS ONE, 2016, v. 11, n. 11, p. 1, doi. 10.1371/journal.pone.0166923
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- Publication type:
- Article
Capture Hi-C identifies a novel causal gene, IL20RA, in the pan-autoimmune genetic susceptibility region 6q23.
- Published in:
- Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-1078-x
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- Publication type:
- Article
Defining cell type with chromatin profiling.
- Published in:
- Nature Biotechnology, 2016, v. 34, n. 11, p. 1126, doi. 10.1038/nbt.3724
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- Publication type:
- Article
Integrating epigenomic data and 3D genomic structure with a new measure of chromatin assortativity.
- Published in:
- Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-1003-3
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- Publication type:
- Article
CHiCAGO: robust detection of DNA looping interactions in Capture Hi-C data.
- Published in:
- Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-0992-2
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- Publication type:
- Article
Gaps in the body: attention and improvisation.
- Published in:
- Brolga: An Australian Journal About Dance, 2015, n. 40, p. 73
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- Publication type:
- Article
Single-cell Hi-C for genome-wide detection of chromatin interactions that occur simultaneously in a single cell.
- Published in:
- Nature Protocols, 2015, v. 10, n. 12, p. 1986, doi. 10.1038/nprot.2015.127
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- Publication type:
- Article
Capture Hi-C reveals novel candidate genes and complex long-range interactions with related autoimmune risk loci.
- Published in:
- Nature Communications, 2015, v. 6, n. 11, p. 10069, doi. 10.1038/ncomms10069
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- Publication type:
- Article
Polycomb repressive complex PRC1 spatially constrains the mouse embryonic stem cell genome.
- Published in:
- Nature Genetics, 2015, v. 47, n. 10, p. 1179, doi. 10.1038/ng.3393
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- Publication type:
- Article
Comparison of Hi-C results using in-solution versus in-nucleus ligation.
- Published in:
- Genome Biology, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s13059-015-0753-7
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- Publication type:
- Article
Three Dimensional Organization of the Nucleus: adding DNA sequences to the big picture.
- Published in:
- Genome Biology, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s13059-015-0751-9
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- Publication type:
- Article
Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C.
- Published in:
- Nature Genetics, 2015, v. 47, n. 6, p. 598, doi. 10.1038/ng.3286
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- Publication type:
- Article
The Economic History of Belize: From the 17th Century to Post-Independence.
- Published in:
- 2015
- By:
- Publication type:
- Book Review
Capture Hi-C identifies the chromatin interactome of colorectal cancer risk loci.
- Published in:
- Nature Communications, 2015, v. 6, n. 2, p. 6178, doi. 10.1038/ncomms7178
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- Publication type:
- Article
Toward an Understanding of the Influence of Cultural Background and Domain Experience on the Effects of Risk-Pricing Formats on Risk Perception.
- Published in:
- Risk Analysis: An International Journal, 2014, v. 34, n. 10, p. 1846, doi. 10.1111/risa.12210
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- Publication type:
- Article
The impact of chromosomal rearrangements on regulation of gene expression.
- Published in:
- Human Molecular Genetics, 2014, v. 23, n. R1, p. R76, doi. 10.1093/hmg/ddu278
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- Publication type:
- Article
Single-cell Hi-C reveals cell-to-cell variability in chromosome structure.
- Published in:
- Nature, 2013, v. 502, n. 7469, p. 59, doi. 10.1038/nature12593
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- Publication type:
- Article
Sixty years of genome biology.
- Published in:
- Genome Biology, 2013, v. 14, n. 4, p. 113, doi. 10.1186/gb-2013-14-4-113
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- Publication type:
- Article
Frontiers, Plantations and Walled Cities: Essays on Society, Culture, and Politics in the Hispanic Caribbean, 1800-1945 - by Martínez-Fernández, Luis.
- Published in:
- 2013
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- Publication type:
- Book Review
Method.
- Published in:
- 2013
- By:
- Publication type:
- Journal Article
Nuclear RNA Sequencing of the Mouse Erythroid Cell Transcriptome.
- Published in:
- PLoS ONE, 2012, v. 7, n. 11, p. 1, doi. 10.1371/journal.pone.0049274
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- Publication type:
- Article
On the Move: The Caribbean since 1989 - by Bronfman, Alejandra.
- Published in:
- 2012
- By:
- Publication type:
- Book Review
Narratives of Citizenship: Indigenous and Diasporic Peoples Unsettle the Nation-State.
- Published in:
- 2012
- By:
- Publication type:
- Book Review
The Impact of Human-Technology Cooperation and Distributed Cognition in Forensic Science: Biasing Effects of AFIS Contextual Information on Human Experts*.
- Published in:
- Journal of Forensic Sciences, 2012, v. 57, n. 2, p. 343, doi. 10.1111/j.1556-4029.2011.02013.x
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- Publication type:
- Article
Anglo-American Diplomacy and the Reopening of the Guyana-Venezuela Boundary Controversy, 1961-1966 - by Joseph, Cedric L.
- Published in:
- 2012
- By:
- Publication type:
- Book Review
Dynamic reasoning and time pressure: Transition from analytical operations to experiential responses.
- Published in:
- Theory & Decision, 2011, v. 71, n. 2, p. 211, doi. 10.1007/s11238-009-9181-z
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- Publication type:
- Article
A Dynamical Model Reveals Gene Co-Localizations in Nucleus.
- Published in:
- PLoS Computational Biology, 2011, v. 7, n. 7, p. 1, doi. 10.1371/journal.pcbi.1002094
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- Publication type:
- Article