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Divergent patterns of selection on metabolite levels and gene expression.
- Published in:
- BMC Ecology & Evolution, 2021, v. 21, n. 1, p. 1, doi. 10.1186/s12862-021-01915-5
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- Article
Spatially varying cis-regulatory divergence in Drosophila embryos elucidates cis-regulatory logic.
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- PLoS Genetics, 2018, v. 14, n. 11, p. 1, doi. 10.1371/journal.pgen.1007631
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- Article
The cis-regulatory effects of modern human-specific variants.
- Published in:
- eLife, 2021, p. 1, doi. 10.7554/eLife.63713
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- Publication type:
- Article
Fine-mapping cis-regulatory variants in diverse human populations.
- Published in:
- eLife, 2019, p. 1, doi. 10.7554/eLife.39595.001
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- Article
Genetic conflict reflected in tissue-specific maps of genomic imprinting in human and mouse.
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- Nature Genetics, 2015, v. 47, n. 5, p. 544, doi. 10.1038/ng.3274
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- Article
Modularity and evolutionary constraint on proteins.
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- Nature Genetics, 2005, v. 37, n. 4, p. 351, doi. 10.1038/ng1530
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- Article
Predictive Genes in Adjacent Normal Tissue Are Preferentially Altered by sCNV during Tumorigenesis in Liver Cancer and May Rate Limiting.
- Published in:
- PLoS ONE, 2011, v. 6, n. 7, p. 1, doi. 10.1371/journal.pone.0020090
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- Article
The Quantitative Genetics of Phenotypic Robustness.
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- PLoS ONE, 2010, v. 5, n. 1, p. 1, doi. 10.1371/journal.pone.0008635
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- Publication type:
- Article
Comparative expression profiling reveals widespread coordinated evolution of gene expression across eukaryotes.
- Published in:
- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-07436-y
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- Publication type:
- Article
Transcriptome diversity is a systematic source of variation in RNA-sequencing data.
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- PLoS Computational Biology, 2022, v. 18, n. 3, p. 1, doi. 10.1371/journal.pcbi.1009939
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- Article
Evolution of Spatial and Temporal cis-Regulatory Divergence in Sticklebacks.
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- Molecular Biology & Evolution, 2023, v. 40, n. 3, p. 1, doi. 10.1093/molbev/msad034
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- Article
Disentangling Sources of Selection on Exonic Transcriptional Enhancers.
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- Molecular Biology & Evolution, 2016, v. 33, n. 2, p. 585, doi. 10.1093/molbev/msv234
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- Article
Transcript Length Mediates Developmental Timing of Gene Expression Across Drosophila.
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- Molecular Biology & Evolution, 2014, v. 31, n. 11, p. 2879, doi. 10.1093/molbev/msu226
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- Publication type:
- Article
A Novel Test for Selection on cis-Regulatory Elements Reveals Positive and Negative Selection Acting on Mammalian Transcriptional Enhancers.
- Published in:
- Molecular Biology & Evolution, 2013, v. 30, n. 11, p. 2509, doi. 10.1093/molbev/mst134
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- Publication type:
- Article
Cell-type-specific cis-regulatory divergence in gene expression and chromatin accessibility revealed by human-chimpanzee hybrid cells.
- Published in:
- eLife, 2024, p. 1, doi. 10.7554/eLife.89594
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- Article
Chromatin activity identifies differential gene regulation across human ancestries.
- Published in:
- Genome Biology, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s13059-024-03165-2
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- Publication type:
- Article
Accounting for cis-regulatory constraint prioritizes genes likely to affect species-specific traits.
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- Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-02846-8
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- Publication type:
- Article
Cell-cycle regulated transcription associates with DNA replication timing in yeast and human.
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- Genome Biology, 2013, v. 14, n. 10, p. 2, doi. 10.1186/gb-2013-14-10-r111
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- Article
Population-specificity of human DNA methylation.
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- Genome Biology, 2012, v. 13, n. 2, p. 1, doi. 10.1186/gb-2012-13-2-r8
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- Article
Assessing the Determinants of Evolutionary Rates in the Presence of Noise.
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- Molecular Biology & Evolution, 2007, v. 24, n. 5, p. 1113, doi. 10.1093/molbev/msm044
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- Article
Estimating Selection Pressures from Limited Comparative Data.
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- Molecular Biology & Evolution, 2006, v. 23, n. 8, p. 1457, doi. 10.1093/molbev/msl021
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- Article
Adjusting for Selection on Synonymous Sites in Estimates of Evolutionary Distance.
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- Molecular Biology & Evolution, 2005, v. 22, n. 1, p. 174, doi. 10.1093/molbev/msh265
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- Article
Detecting selection using a single genome sequence of M. tuberculosis and P. falciparum.
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- Nature, 2004, v. 428, n. 6986, p. 942, doi. 10.1038/nature02458
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- Article
Genomic function (communication arising): Rate of evolution and gene dispensability.
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- Nature, 2003, v. 421, n. 6922, p. 497, doi. 10.1038/421497a
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- Article
Protein dispensability and rate of evolution.
- Published in:
- Nature, 2001, v. 411, n. 6841, p. 1046, doi. 10.1038/35082561
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- Article
Confirmation of Organized Modularity in the Yeast Interactome.
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- 2007
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- Publication type:
- Letter
Aging and Gene Expression in the Primate Brain.
- Published in:
- PLoS Biology, 2005, v. 3, n. 9, p. 1653, doi. 10.1371/journal.pbio.0030274
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- Article
Aging and Gene Expression in the Primate Brain.
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- PLoS Biology, 2005, v. 3, n. 8, p. 1, doi. 10.1371/journal.pbio.0030274
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- Publication type:
- Article
Conservation and Evolution of Cis-Regulatory Systems in Ascomycete Fungi.
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- PLoS Biology, 2004, v. 2, n. 12, p. 2202, doi. 10.1371/journal.pbio.0020398
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- Publication type:
- Article
Conservation and Evolution of Cis-Regulatory Systems in Ascomycete Fungi.
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- PLoS Biology, 2004, v. 2, n. 11, p. 1, doi. 10.1371/journal.pbio.0020398
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- Publication type:
- Article
Noise Minimization in Eukaryotic Gene Expression.
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- PLoS Biology, 2004, v. 2, n. 6, p. 834, doi. 10.1371/journal.pbio.0020137
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- Publication type:
- Article
Noise Minimization in Eukaryotic Gene Expression.
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- PLoS Biology, 2004, v. 2, n. 4, p. 1, doi. 10.1371/journal.pbio.0020137
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- Article
Discordance of DNA Methylation Variance Between two Accessible Human Tissues.
- Published in:
- Scientific Reports, 2015, p. 8257, doi. 10.1038/srep08257
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- Article
The Molecular Mechanism of a <i>Cis</i>-Regulatory Adaptation in Yeast.
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- PLoS Genetics, 2013, v. 9, n. 9, p. 1, doi. 10.1371/journal.pgen.1003813
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- Publication type:
- Article
Systematic Detection of Polygenic cis-Regulatory Evolution.
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- PLoS Genetics, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pgen.1002023
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- Article
Genome-wide approaches to the study of adaptive gene expression evolution.
- Published in:
- BioEssays, 2011, v. 33, n. 6, p. 469, doi. 10.1002/bies.201000094
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- Publication type:
- Article
Molecular mechanisms of coronary disease revealed using quantitative trait loci for TCF21 binding, chromatin accessibility, and chromosomal looping.
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- Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02049-5
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- Article
The somatic mutation landscape of the human body.
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- Genome Biology, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s13059-019-1919-5
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- Publication type:
- Article
Differences in enhancer activity in mouse and zebrafish reporter assays are often associated with changes in gene expression.
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- BMC Genomics, 2012, v. 13, n. 1, p. 713, doi. 10.1186/1471-2164-13-713
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- Publication type:
- Article
Genetic validation of whole-transcriptome sequencing for mapping expression affected by cis-regulatory variation.
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- BMC Genomics, 2010, v. 11, p. 473, doi. 10.1186/1471-2164-11-473
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- Publication type:
- Article
Evolutionary rate depends on number of protein-protein interactions independently of gene expression level.
- Published in:
- BMC Evolutionary Biology, 2004, v. 4, p. 13, doi. 10.1186/1471-2148-4-13
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- Article
A simple dependence between protein evolution rate and the number of protein-protein interactions.
- Published in:
- BMC Evolutionary Biology, 2003, v. 3, p. 11, doi. 10.1186/1471-2148-3-11
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- Publication type:
- Article
Codon Usage and Selection on Proteins.
- Published in:
- Journal of Molecular Evolution, 2006, v. 63, n. 5, p. 635, doi. 10.1007/s00239-005-0233-x
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- Publication type:
- Article
Local Adaptation of Sun-Exposure-Dependent Gene Expression Regulation in Human Skin.
- Published in:
- PLoS Genetics, 2016, v. 12, n. 10, p. 1, doi. 10.1371/journal.pgen.1006382
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- Publication type:
- Article
Dissecting the Genetic Basis of a Complex cis-Regulatory Adaptation.
- Published in:
- PLoS Genetics, 2015, v. 11, n. 12, p. 1, doi. 10.1371/journal.pgen.1005751
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- Publication type:
- Article