Works by Forterre, Patrick

Results: 124

Single-stranded DNA viruses employ a variety of mechanisms for integration into host genomes.

Published in:

Annals of the New York Academy of Sciences, 2015, v. 1341, n. 1, p. 41, doi. 10.1111/nyas.12675

By:

Krupovic, Mart;
Forterre, Patrick

Publication type:

Article

Phylogeny of the Varidnaviria Morphogenesis Module: Congruence and Incongruence With the Tree of Life and Viral Taxonomy.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.704052

By:

Woo, Anthony C.;
Gaia, Morgan;
Guglielmini, Julien;
Da Cunha, Violette;
Forterre, Patrick

Publication type:

Article

Qri7/OSGEPL, the mitochondrial version of the universal Kae1/YgjD protein, is essential for mitochondrial genome maintenance.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5343, doi. 10.1093/nar/gkp557

By:

Oberto, Jacques;
Breuil, Norman;
Hecker, Arnaud;
Farina, Francesca;
Brochier-Armanet, Céline;
Culetto, Emmanuel;
Forterre, Patrick

Publication type:

Article

Phylogenomics of DNA topoisomerases: their origin and putative roles in the emergence of modern organisms.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 3, p. 679, doi. 10.1093/nar/gkp032

By:

Forterre, Patrick;
Gadelle, Danièle

Publication type:

Article

An archaeal orthologue of the universal protein Kae1 is an iron metalloprotein which exhibits atypical DNA-binding properties and apurinic-endonuclease activity in vitro.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 18, p. 6042, doi. 10.1093/nar/gkm554

By:

Hecker, Arnaud;
Leulliot, Nicolas;
Gadelle, Danièle;
Graille, Marc;
Justome, Anthony;
Dorlet, Pierre;
Brochier, Céline;
Quevillon-Cheruel, Sophie;
Le Cam, Eric;
van Tilbeurgh, Herman;
Forterre, Patrick

Publication type:

Article

Genomewide and biochemical analyses of DNA-binding activity of Cdc6/Orc1 and Mcm proteins in Pyrococcus sp.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 10, p. 3214, doi. 10.1093/nar/gkm212

By:

Matsunaga, Fujihiko;
Glatigny, Annie;
Mucchielli-Giorgi, Marie-Hélène;
Agier, Nicolas;
Delacroix, Hervé;
Marisa, Laetitia;
Durosay, Patrice;
Ishino, Yoshizumi;
Aggerbeck, Lawrence;
Forterre, Patrick

Publication type:

Article

DNA bending, compaction and negative supercoiling by the architectural protein Sso7d of Sulfolobus solfataricus.

Published in:

Nucleic Acids Research, 2002, v. 30, n. 12, p. 2656, doi. 10.1093/nar/gkf377

By:

Napoli, Alessandra;
Zivanovic, Yvan;
Bocs, Chantal;
Buhler, Cyril;
Rossi, Mose’;
Forterre, Patrick;
Ciaramella, Maria

Publication type:

Article

Pyrococcus genome comparison evidences chromosome shuffling-driven evolution.

Published in:

Nucleic Acids Research, 2002, v. 30, n. 9, p. 1902, doi. 10.1093/nar/30.9.1902

By:

Zivanovic, Yvan;
Lopez, Philippe;
Philippe, Hervé;
Forterre, Patrick

Publication type:

Article

Topoisomerase activity of the hyperthermophilic replication initiator protein Rep75.

Published in:

Nucleic Acids Research, 2000, v. 28, n. 11, p. 2251, doi. 10.1093/nar/28.11.2251

By:

Marsin, Stéphanie;
Marguet, Evelyne;
Forterre, Patrick

Publication type:

Article

Reconstitution of DNA topoisomerase VI ofthe thermophilic archaeon Sulfolobus shibatae from subunits separately overexpressed in Escherichia coli.

Published in:

Nucleic Acids Research, 1998, v. 26, n. 22, p. 5157, doi. 10.1093/nar/26.22.5157

By:

Buhler, Cyril;
Gadelle, Danièle;
Forterre, Patrick;
Wang, James C.;
Bergerat, Agnès

Publication type:

Article

In vitro DNA binding of the archaeal protein Sso7d induces negative supercoiling at temperatures typical for thermophilic growth.

Published in:

Nucleic Acids Research, 1998, v. 26, n. 10, p. 2322

By:

López‐García, Purificación;
Knapp, Stefan;
Ladenstein, Rudolf;
Forterre, Patrick

Publication type:

Article

Structure of the archaeal Kae1/Bud32 fusion protein MJ1130: a model for the eukaryotic EKC/KEOPS subcomplex.

Published in:

EMBO Journal, 2008, v. 27, n. 17, p. 2340, doi. 10.1038/emboj.2008.157

By:

Hecker, Arnaud;
Lopreiato, Raffaele;
Graille, Marc;
Collinet, Bruno;
Forterre, Patrick;
Libri, Domenico;
van Tilbeurgh, Herman

Publication type:

Article

Genetic analysis of DNA repair in the hyperthermophilic archaeon, Thermococcus kodakaraensis.

Published in:

Genes & Genetic Systems, 2010, v. 85, n. 4, p. 243, doi. 10.1266/ggs.85.243

By:

Ryosuke Fujikane;
Sonoko Ishino;
Yoshizumi Ishino;
Forterre, Patrick R.

Publication type:

Article

Asgard archaea do not close the debate about the universal tree of life topology.

Published in:

PLoS Genetics, 2018, v. 14, n. 3, p. 1, doi. 10.1371/journal.pgen.1007215

By:

Da Cunha, Violette;
Gaia, Morgan;
Nasir, Arshan;
Forterre, Patrick

Publication type:

Article

The legacy of Carl Woese and Wolfram Zillig: from phylogeny to landmark discoveries.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 10, p. 713, doi. 10.1038/nrmicro3124

By:

Albers, Sonja-Verena;
Forterre, Patrick;
Prangishvili, David;
Schleper, Christa

Publication type:

Article

The origin of eukaryotes and their relationship with the Archaea: are we at a phylogenomic impasse?

Published in:

Nature Reviews Microbiology, 2010, v. 8, n. 10, p. 743, doi. 10.1038/nrmicro2426

By:

Gribaldo, Simonetta;
Poole, Anthony M.;
Daubin, Vincent;
Forterre, Patrick;
Brochier-Armanet, Céline

Publication type:

Article

The Last Universal Common Ancestor of Ribosome-Encoding Organisms: Portrait of LUCA.

Published in:

Journal of Molecular Evolution, 2024, v. 92, n. 5, p. 550, doi. 10.1007/s00239-024-10186-9

By:

Forterre, Patrick

Publication type:

Article

Evolution of DNA Polymerase Families: Evidences for Multiple Gene Exchange Between Cellular and Viral Proteins.

Published in:

Journal of Molecular Evolution, 2002, v. 54, n. 6, p. 763, doi. 10.1007/s00239-001-0078-x

By:

Filée, Jonathan;
Forterre, Patrick;
Sen-Lin, Tang;
Laurent, Jacqueline

Publication type:

Article

Les virus à nouveau sur le devant de la scène.

Published in:

Biologie Aujourd'hui, 2013, v. 207, n. 3, p. 153, doi. 10.1051/jbio/2013018

By:

Forterre, Patrick

Publication type:

Article

Recent Mobility of Casposons, Self-Synthesizing Transposons at the Origin of the CRISPR-Cas Immunity.

Published in:

Genome Biology & Evolution, 2016, v. 8, n. 2, p. 375, doi. 10.1093/gbe/evw006

By:

Krupovic, Mart;
Shmakov, Sergey;
Makarova, Kira S.;
Forterre, Patrick;
Koonin, Eugene V.

Publication type:

Article

Global Phylogenomic Analysis Disentangles the Complex Evolutionary History of DNA Replication in Archaea.

Published in:

Genome Biology & Evolution, 2014, v. 6, n. 1, p. 192, doi. 10.1093/gbe/evu004

By:

Raymann, Kasie;
Forterre, Patrick;
Brochier-Armanet, Céline;
Gribaldo, Simonetta

Publication type:

Article

Casposons: a new superfamily of self-synthesizing DNA transposons at the origin of prokaryotic CRISPR-Cas immunity.

Published in:

BMC Biology, 2014, v. 12, n. 1, p. 1, doi. 10.1186/1741-7007-12-36

By:

Krupovic, Mart;
Makarova, Kira S.;
Forterre, Patrick;
Prangishvili, David;
Koonin, Eugene V.

Publication type:

Article

A series of new E. coli-Thermococcus shuttle vectors compatible with previously existing vectors.

Published in:

Extremophiles, 2018, v. 22, n. 4, p. 591, doi. 10.1007/s00792-018-1019-6

By:

Catchpole, Ryan;
Gorlas, Aurore;
Oberto, Jacques;
Forterre, Patrick

Publication type:

Article

Diversity of bacteria and archaea from two shallow marine hydrothermal vents from Vulcano Island.

Published in:

Extremophiles, 2017, v. 21, n. 4, p. 733, doi. 10.1007/s00792-017-0938-y

By:

Antranikian, Garabed;
Suleiman, Marcel;
Schäfers, Christian;
Adams, Michael;
Bartolucci, Simonetta;
Blamey, Jenny;
Birkeland, Nils-Kåre;
Bonch-Osmolovskaya, Elizaveta;
Costa, Milton;
Cowan, Don;
Danson, Michael;
Forterre, Patrick;
Kelly, Robert;
Ishino, Yoshizumi;
Littlechild, Jennifer;
Moracci, Marco;
Noll, Kenneth;
Oshima, Tairo;
Robb, Frank;
Rossi, Mosè

Publication type:

Article

Synergistic template-free synthesis of dsDNA by Thermococcus nautili primase PolpTN2, DNA polymerase PolB, and pTN2 helicase.

Published in:

Extremophiles, 2015, v. 19, n. 1, p. 69, doi. 10.1007/s00792-014-0706-1

By:

Béguin, Pierre;
Gill, Sukhvinder;
Charpin, Nicole;
Forterre, Patrick

Publication type:

Article

Dark matter in archaeal genomes: a rich source of novel mobile elements, defense systems and secretory complexes.

Published in:

Extremophiles, 2014, v. 18, n. 5, p. 877, doi. 10.1007/s00792-014-0672-7

By:

Makarova, Kira;
Wolf, Yuri;
Forterre, Patrick;
Prangishvili, David;
Krupovic, Mart;
Koonin, Eugene

Publication type:

Article

The SF1 helicase encoded by the archaeal plasmid pTN2 of Thermococcus nautili.

Published in:

Extremophiles, 2014, v. 18, n. 4, p. 779, doi. 10.1007/s00792-014-0658-5

By:

Béguin, Pierre;
Baron, Bruno;
Gill, Sukhvinder;
Charpin, Nicole;
Forterre, Patrick

Publication type:

Article

Thermococcus marinus sp. nov. and Thermococcus radiotolerans sp. nov., two hyperthermophilic archaea from deep-sea hydrothermal vents that resist ionizing radiation.

Published in:

Extremophiles, 2004, v. 8, n. 3, p. 219, doi. 10.1007/s00792-004-0380-9

By:

Jolivet, Edmond;
Corre, Erwan;
L'Haridon, Stéphane;
Forterre, Patrick;
Prieur, Daniel

Publication type:

Article

Structural insights into a new homodimeric self-activated GTPase family.

Published in:

EMBO Reports, 2007, v. 8, n. 6, p. 569, doi. 10.1038/sj.embor.7400958

By:

Gras, Stéphanie;
Chaumont, Valérie;
Fernandez, Bernard;
Carpentier, Philippe;
Charrier-Savournin, Fabienne;
Schmitt, Sophie;
Pineau, Charles;
Flament, Didier;
Hecker, Arnaud;
Forterre, Patrick;
Armengaud, Jean;
Housset, Dominique

Publication type:

Article

Identification of short 'eukaryotic' Okazaki fragments synthesized from a prokaryotic replication origin.

Published in:

EMBO Reports, 2003, v. 4, n. 2, p. 154, doi. 10.1038/sj.embor.embor732

By:

Matsunaga, Fujihiko;
Norais, Cédric;
Forterre, Patrick;
Myllykallio, Hannu

Publication type:

Article

NurA, a novel 5'-3' nuclease gene linked to rad50 and mre11 homologs of thermophilic Archaea.

Published in:

EMBO Reports, 2002, v. 3, n. 6, p. 537, doi. 10.1093/embo-reports/kvf112

By:

Constantinesco, Florence;
Forterre, Patrick;
Elie, Christiane

Publication type:

Article

An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi.

Published in:

Molecular Microbiology, 2003, v. 47, n. 6, p. 1495, doi. 10.1046/j.1365-2958.2003.03381.x

By:

Cohen, Georges N.;
Barbe, Valérie;
Flament, Didier;
Galperin, Michael;
Heilig, Roland;
Lecompte, Odile;
Poch, Olivier;
Prieur, Daniel;
Quérellou, Joël;
Ripp, Raymond;
Thierry, Jean-Claude;
Van der Oost, John;
Weissenbach, Jean;
Zivanovic, Yvan;
Forterre, Patrick

Publication type:

Article

Negative constrained DNA supercoiling in archaeal nucleosomes.

Published in:

Molecular Microbiology, 2000, v. 35, n. 2, p. 341, doi. 10.1046/j.1365-2958.2000.01689.x

By:

Musgrave, David;
Forterre, Patrick;
Slesarev, Alexei

Publication type:

Article

Control of DNA topology during thermal stress in hyperthermophilic archaea: DNA topoisomerase levels, activities and induced thermotolerance during heat and cold shock in Sulfolobus.

Published in:

Molecular Microbiology, 1999, v. 33, n. 4, p. 766, doi. 10.1046/j.1365-2958.1999.01524.x

By:

López-García, Purificación;
Forterre, Patrick

Publication type:

Article

Displacement of cellular proteins by functional analogues from plasmids or viruses could explain puzzling phylogenies of many DNA informational proteins.

Published in:

Molecular Microbiology, 1999, v. 33, n. 3, p. 457, doi. 10.1046/j.1365-2958.1999.01497.x

By:

Forterre, Patrick

Publication type:

Article

The active site of the rolling circle replication protein Rep75 is involved in site-specific nuclease, ligase and nucleotidyl transferase activities.

Published in:

Molecular Microbiology, 1999, v. 33, n. 3, p. 537, doi. 10.1046/j.1365-2958.1999.01498.x

By:

Marsin, Stéphanie;
Forterre, Patrick

Publication type:

Article

Identification of putative chromosomal origins of replication in Archaea.

Published in:

Molecular Microbiology, 1999, v. 32, n. 4, p. 883, doi. 10.1046/j.1365-2958.1999.01370.x

By:

Lopez, Philippe;
Philippe, Hervé;
Myllykallio, Hannu;
Forterre, Patrick

Publication type:

Article

Identification of the gene encoding archeal-specific DNA-binding proteins of the Sac10b family.

Published in:

Molecular Microbiology, 1999, v. 32, n. 3, p. 669, doi. 10.1046/j.1365-2958.1999.01366.x

By:

Forterre, Patrick;
Confalonieri, Fabrice;
Knapp, Stefan

Publication type:

Article

A rolling circle replication initiator protein with a nucleotidyl-transferase activity encoded by...

Published in:

Molecular Microbiology, 1998, v. 27, n. 6, p. 1183, doi. 10.1046/j.1365-2958.1998.00759.x

By:

Marsin, Stephanie;
Forterre, Patrick

Publication type:

Article

DNA topology in hyperthermophilic archaea: reference states and their variation with growth phase, growth temperature, and temperature stresses.

Published in:

Molecular Microbiology, 1997, v. 23, n. 6, p. 1267, doi. 10.1046/j.1365-2958.1997.3051668.x

By:

López-García, Purificación;
Forterre, Patrick

Publication type:

Article

Viruses in the 21st Century: From the Curiosity-Driven Discovery of Giant Viruses to New Concepts and Definition of Life.

Published in:

Clinical Infectious Diseases, 2017, v. 65, p. S74, doi. 10.1093/cid/cix349

By:

Forterre, Patrick

Publication type:

Article

Viruses in the 21st Century: From the Curiosity-Driven Discovery of Giant Viruses to New Concepts and Definition of Life.

Published in:

Clinical Infectious Diseases, 2017, v. 65, p. S74, doi. 10.1093/cid/cix349

By:

Forterre, Patrick

Publication type:

Article

The virocell concept and environmental microbiology.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 2, p. 233, doi. 10.1038/ismej.2012.110

By:

Forterre, Patrick

Publication type:

Article

Expanded Dataset Reveals the Emergence and Evolution of DNA Gyrase in Archaea.

Published in:

Molecular Biology & Evolution, 2022, v. 39, n. 8, p. 1, doi. 10.1093/molbev/msac155

By:

Villain, Paul;
Catchpole, Ryan;
Forterre, Patrick;
Oberto, Jacques;
Cunha, Violette da;
Basta, Tamara

Publication type:

Article

Giant Viruses Encode Actin-Related Proteins.

Published in:

Molecular Biology & Evolution, 2022, v. 39, n. 2, p. 1, doi. 10.1093/molbev/msac022

By:

Cunha, Violette Da;
Gaia, Morgan;
Ogata, Hiroyuki;
Jaillon, Olivier;
Delmont, Tom O;
Forterre, Patrick

Publication type:

Article

Pervasive Suicidal Integrases in Deep-Sea Archaea.

Published in:

Molecular Biology & Evolution, 2020, v. 37, n. 6, p. 1727, doi. 10.1093/molbev/msaa041

By:

Badel, Catherine;
Cunha, Violette Da;
Forterre, Patrick;
Oberto, Jacques

Publication type:

Article

The Evolution of Reverse Gyrase Suggests a Nonhyperthermophilic Last Universal Common Ancestor.

Published in:

Molecular Biology & Evolution, 2019, v. 36, n. 12, p. 2737, doi. 10.1093/molbev/msz180

By:

Catchpole, Ryan J;
Forterre, Patrick

Publication type:

Article

Unique genome replication mechanism of the archaeal virus AFV1.

Published in:

Molecular Microbiology, 2014, v. 92, n. 6, p. 1313, doi. 10.1111/mmi.12630

By:

Pina, Mery;
Basta, Tamara;
Quax, Tessa E. F.;
Joubert, Alexandra;
Baconnais, Sonia;
Cortez, Diego;
Lambert, Sarah;
Le Cam, Eric;
Bell, Stephen D.;
Forterre, Patrick;
Prangishvili, David

Publication type:

Article

Novel archaeal plasmid pAH1 and its interactions with the lipothrixvirus AFV1.

Published in:

Molecular Microbiology, 2009, v. 71, n. 1, p. 23, doi. 10.1111/j.1365-2958.2008.06488.x

By:

Basta, Tamara;
Smyth, John;
Forterre, Patrick;
Prangishvili, David;
Xu Peng

Publication type:

Article

The rolling-circle plasmid pTN1 from the hyperthermophilic archaeon Thermococcus nautilus.

Published in:

Molecular Microbiology, 2007, v. 66, n. 2, p. 357, doi. 10.1111/j.1365-2958.2007.05912.x

By:

Soler, Nicolas;
Justome, Anthony;
Quevillon-Cheruel, Sophie;
Lorieux, Florence;
Le Cam, Eric;
Marguet, Evelyne;
Forterre, Patrick

Publication type:

Article