Works by Forer, Lukas

Results: 34

Nuclear and mitochondrial genetic variants associated with mitochondrial DNA copy number.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-52373-0

By:

Koller, Adriana;
Filosi, Michele;
Weissensteiner, Hansi;
Fazzini, Federica;
Gorski, Mathias;
Pattaro, Cristian;
Schönherr, Sebastian;
Forer, Lukas;
Herold, Janina M.;
Stark, Klaus J.;
Döttelmayer, Patricia;
Hicks, Andrew A.;
Pramstaller, Peter P.;
Würzner, Reinhard;
Eckardt, Kai-Uwe;
Heid, Iris M.;
Fuchsberger, Christian;
Lamina, Claudia;
Kronenberg, Florian

Publication type:

Article

Tutorial: a statistical genetics guide to identifying HLA alleles driving complex disease.

Published in:

Nature Protocols, 2023, v. 18, n. 9, p. 2625, doi. 10.1038/s41596-023-00853-4

By:

Sakaue, Saori;
Gurajala, Saisriram;
Curtis, Michelle;
Luo, Yang;
Choi, Wanson;
Ishigaki, Kazuyoshi;
Kang, Joyce B.;
Rumker, Laurie;
Deutsch, Aaron J.;
Schönherr, Sebastian;
Forer, Lukas;
LeFaive, Jonathon;
Fuchsberger, Christian;
Han, Buhm;
Lenz, Tobias L.;
de Bakker, Paul I. W.;
Okada, Yukinori;
Smith, Albert V.;
Raychaudhuri, Soumya

Publication type:

Article

Interactive exploration of adverse events and multimorbidity in CKD.

Published in:

Nephrology Dialysis Transplantation, 2024, v. 39, n. 12, p. 2016, doi. 10.1093/ndt/gfae092

By:

Steinbrenner, Inga;
Kotsis, Fruzsina;
Kosch, Robin;
Meiselbach, Heike;
Bärthlein, Barbara;
Stockmann, Helena;
Lipovsek, Jan;
Zacharias, Helena U;
Altenbuchinger, Michael;
Dienemann, Thomas;
Wytopil, Monika;
Bächle, Helena;
Sommerer, Claudia;
Titze, Stephanie;
Weigel, Anke;
Weissensteiner, Hansi;
Schönherr, Sebastian;
Forer, Lukas;
Kurz, Nadine S;
Menne, Jan

Publication type:

Article

Performing highly parallelized and reproducible GWAS analysis on biobank-scale data.

Published in:

NAR Genomics & Bioinformatics, 2024, v. 6, n. 1, p. 1, doi. 10.1093/nargab/lqae015

By:

Schönherr, Sebastian;
Schachtl-Riess, Johanna F;
Di Maio, Silvia;
Filosi, Michele;
Mark, Marvin;
Lamina, Claudia;
Fuchsberger, Christian;
Kronenberg, Florian;
Forer, Lukas

Publication type:

Article

Changes in self-reported physical and mental health, behaviour and economic status among adults by known seropositivity and sociodemographic factors before and after the COVID-19 pandemic outbreak in Ischgl, Austria.

Published in:

Frontiers in Public Health, 2025, p. 1, doi. 10.3389/fpubh.2025.1488108

By:

Bates, Katie;
Borena, Wegene;
McKee, Martin;
Hayek, Lore;
Bouanchaud, Paul;
Bánki, Zoltán;
Riepler, Lydia;
Rössler, Annika;
Falkensammer, Barbara;
Paetzold, Jörg;
Walser, Andreas;
Schönherr, Sebastian;
Forer, Lukas;
Knabl, Ludwig;
Kimpel, Janine;
von Laer, Dorothee;
Ulmer, Hanno

Publication type:

Article

Changes in self-reported physical and mental health, behaviour and economic status among adults by known seropositivity and sociodemographic factors before and after the COVID-19 pandemic outbreak in Ischgl, Austria.

Published in:

Frontiers in Public Health, 2025, p. 1, doi. 10.3389/fpubh.2025.1488108

By:

Bates, Katie;
Borena, Wegene;
McKee, Martin;
Hayek, Lore;
Bouanchaud, Paul;
Bánki, Zoltán;
Riepler, Lydia;
Rössler, Annika;
Falkensammer, Barbara;
Paetzold, Jörg;
Walser, Andreas;
Schönherr, Sebastian;
Forer, Lukas;
Knabl, Ludwig;
Kimpel, Janine;
von Laer, Dorothee;
Ulmer, Hanno

Publication type:

Article

Sex and statin-related genetic associations at the PCSK9 gene locus: results of genome-wide association meta-analysis.

Published in:

Biology of Sex Differences, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13293-024-00602-6

By:

Pott, Janne;
Kheirkhah, Azin;
Gadin, Jesper R.;
Kleber, Marcus E.;
Delgado, Graciela E.;
Kirsten, Holger;
Forer, Lukas;
Hauck, Stefanie M.;
Burkhardt, Ralph;
Scharnagl, Hubert;
Loeffler, Markus;
März, Winfried;
Thiery, Joachim;
Gieger, Christian;
Peters, Annette;
Silveira, Angela;
Hooft, Ferdinand van't;
Kronenberg, Florian;
Scholz, Markus

Publication type:

Article

Resolving intra-repeat variation in medically relevant VNTRs from short-read sequencing data using the cardiovascular risk gene LPA as a model.

Published in:

Genome Biology, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s13059-024-03316-5

By:

Di Maio, Silvia;
Zöscher, Peter;
Weissensteiner, Hansi;
Forer, Lukas;
Schachtl-Riess, Johanna F.;
Amstler, Stephan;
Streiter, Gertraud;
Pfurtscheller, Cathrin;
Paulweber, Bernhard;
Kronenberg, Florian;
Coassin, Stefan;
Schönherr, Sebastian

Publication type:

Article

Lipoprotein(a) concentrations and cardiovascular disease in patients with chronic kidney disease: Results from the German Chronic Kidney Disease study.

Published in:

Journal of Internal Medicine, 2024, v. 296, n. 6, p. 510, doi. 10.1111/joim.20027

By:

Gruber, Ida;
Kollerits, Barbara;
Forer, Lukas;
Di Maio, Silvia;
Schachtl‐Riess, Johanna F.;
Kheirkhah, Azin;
Schönherr, Sebastian;
Schultheiss, Ulla T.;
Köttgen, Anna;
Eckardt, Kai‐Uwe;
Coassin, Stefan;
Lamina, Claudia;
Kronenberg, Florian

Publication type:

Article

Apolipoprotein A‐IV concentrations and clinical outcomes in a large chronic kidney disease cohort: Results from the GCKD study.

Published in:

Journal of Internal Medicine, 2022, v. 291, n. 5, p. 622, doi. 10.1111/joim.13437

By:

Schwaiger, Johannes P.;
Kollerits, Barbara;
Steinbrenner, Inga;
Weissensteiner, Hansi;
Schönherr, Sebastian;
Forer, Lukas;
Kotsis, Fruzsina;
Lamina, Claudia;
Schneider, Markus P.;
Schultheiss, Ulla T.;
Wanner, Christoph;
Köttgen, Anna;
Eckardt, Kai‐Uwe;
Kronenberg, Florian

Publication type:

Article

Lipoprotein(a) and SARS‐CoV‐2 infections: Susceptibility to infections, ischemic heart disease and thromboembolic events.

Published in:

Journal of Internal Medicine, 2022, v. 291, n. 1, p. 101, doi. 10.1111/joim.13338

By:

Di Maio, Silvia;
Lamina, Claudia;
Coassin, Stefan;
Forer, Lukas;
Würzner, Reinhard;
Schönherr, Sebastian;
Kronenberg, Florian

Publication type:

Article

Severe COVID-19 disease is associated with genetic factors affecting plasma ACE2 receptor and CRP concentrations.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-89306-4

By:

Vogi, Verena;
Haschka, David;
Forer, Lukas;
Schwendinger, Simon;
Petzer, Verena;
Coassin, Stefan;
Tancevski, Ivan;
Sonnweber, Thomas;
Löffler-Ragg, Judith;
Puchhammer-Stöckl, Elisabeth;
Graninger, Marianne;
Wolf, Dominik;
Kronenberg, Florian;
Zschocke, Johannes;
Jukic, Emina;
Weiss, Günter

Publication type:

Article

Correction: Apolipoprotein A-IV concentrations and cancer in a large cohort of chronic kidney disease patients: results from the GCKD study.

Published in:

2024

By:

Kollerits, Barbara;
Gruber, Simon;
Steinbrenner, Inga;
Schwaiger, Johannes P.;
Weissensteiner, Hansi;
Schönherr, Sebastian;
Forer, Lukas;
Kotsis, Fruzsina;
Schultheiss, Ulla T.;
Meiselbach, Heike;
Wanner, Christoph;
Eckardt, Kai-Uwe;
Kronenberg, Florian

Publication type:

Correction Notice

Apolipoprotein A-IV concentrations and cancer in a large cohort of chronic kidney disease patients: results from the GCKD study.

Published in:

BMC Cancer, 2024, v. 24, n. 1, p. 1, doi. 10.1186/s12885-024-12053-8

By:

Kollerits, Barbara;
Gruber, Simon;
Steinbrenner, Inga;
Schwaiger, Johannes P.;
Weissensteiner, Hansi;
Schönherr, Sebastian;
Forer, Lukas;
Kotsis, Fruzsina;
Schultheiss, Ulla T.;
Meiselbach, Heike;
Wanner, Christoph;
Eckardt, Kai-Uwe;
Kronenberg, Florian;
Schneider, Markus P.;
Schiffer, Mario;
Prokosch, Hans-Ulrich;
Bärthlein, Barbara;
Beck, Andreas;
Reis, André;
Ekici, Arif B.

Publication type:

Article

PedVizApi: a Java API for the interactive, visual analysis of extended pedigrees.

Published in:

Bioinformatics, 2008, v. 24, n. 2, p. 279

By:

Christian Fuchsberger;
Mario Falchi;
Lukas Forer;
Peter P. Pramstaller

Publication type:

Article

Analyzing Low-Level mtDNA Heteroplasmy—Pitfalls and Challenges from Bench to Benchmarking.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 2, p. 935, doi. 10.3390/ijms22020935

By:

Fazzini, Federica;
Fendt, Liane;
Schönherr, Sebastian;
Forer, Lukas;
Schöpf, Bernd;
Streiter, Gertraud;
Losso, Jamie Lee;
Kloss-Brandstätter, Anita;
Kronenberg, Florian;
Weissensteiner, Hansi

Publication type:

Article

Cloudgene: A graphical execution platform for MapReduce programs on private and public clouds.

Published in:

BMC Bioinformatics, 2012, v. 13, n. 1, p. 200, doi. 10.1186/1471-2105-13-200

By:

Sch�nherr, Sebastian;
Forer, Lukas;
Wei�ensteiner, Hansi;
Kronenberg, Florian;
Specht, G�nther;
Kloss-Brandst�tter, Anita

Publication type:

Article

CONAN: copy number variation analysis softwarefor genome-wide association studies.

Published in:

BMC Bioinformatics, 2010, v. 11, p. 318, doi. 10.1186/1471-2105-11-318

By:

Forer, Lukas;
Schönherr, Sebastian;
Weissensteiner, Hansi;
Haider, Florian;
Kluckner, Thomas;
Gieger, Christian;
Wichmann, Heinz-Erich;
Specht, Günther;
Kronenberg, Florian;
Kloss-Brandstätter, Anita

Publication type:

Article

LASER server: ancestry tracing with genotypes or sequence reads.

Published in:

Bioinformatics, 2017, v. 33, n. 13, p. 2056, doi. 10.1093/bioinformatics/btx075

By:

Taliun, Daniel;
Chothani, Sonia P.;
Schönherr, Sebastian;
Forer, Lukas;
Boehnke, Michael;
Abecasis, Gonçalo R.;
Chaolong Wang

Publication type:

Article

mtDNA-Server: next-generation sequencing data analysis of human mitochondrial DNA in the cloud.

Published in:

Nucleic Acids Research, 2016, v. 44, n. W1, p. W64, doi. 10.1093/nar/gkw247

By:

Weissensteiner, Hansi;
Forer, Lukas;
Fuchsberger, Christian;
Schöpf, Bernd;
Kloss-Brandstätter, Anita;
Specht, Gunther;
Kronenberg, Florian;
Schönherr, Sebastian

Publication type:

Article

HaploGrep 2: mitochondrial haplogroup classification in the era of high-throughput sequencing.

Published in:

Nucleic Acids Research, 2016, v. 44, n. W1, p. W58, doi. 10.1093/nar/gkw233

By:

Weissensteiner, Hansi;
Pacher, Dominic;
Kloss-Brandstätter, Anita;
Forer, Lukas;
Specht, Gunther;
Bandelt, Hans-Jürgen;
Kronenberg, Florian;
Salas, Antonio;
Schönherr, Sebastian

Publication type:

Article

Filling the gap: Genetic risk assessment in hypercholesterolemia using LDL‐C and LPA genetic scores.

Published in:

Clinical Genetics, 2023, v. 104, n. 3, p. 334, doi. 10.1111/cge.14387

By:

Schwaninger, Gunda;
Forer, Lukas;
Ebenbichler, Christoph;
Dieplinger, Hans;
Kronenberg, Florian;
Zschocke, Johannes;
Witsch‐Baumgartner, Martina

Publication type:

Article

CLOUDFLOW - ENABLING FASTER BIOMEDICAL PIPELINES WITH MAPREDUCE AND SPARK.

Published in:

Scalable Computing: Practice & Experience, 2016, v. 17, n. 2, p. 103, doi. 10.12694/scpe.v17i2.1159

By:

Forer, Lukas;
Afgan, Enis;
Weissensteiner, Hansi;
Davidovic, Davor;
Specht, Guenther;
Kronenberg, Florian;
Schoenherr, Sebastian

Publication type:

Article

A genome-wide association meta-analysis on apolipoprotein A-IV concentrations.

Published in:

Human Molecular Genetics, 2016, v. 25, n. 16, p. 3635, doi. 10.1093/hmg/ddw211

By:

Lamina, Claudia;
Friedel, Salome;
Coassin, Stefan;
Rueedi, Rico;
Yousri, Noha A.;
Seppälä, Ilkka;
Gieger, Christian;
Schönherr, Sebastian;
Forer, Lukas;
Erhart, Gertraud;
Kollerits, Barbara;
Marques-Vidal, Pedro;
Ried, Janina;
Waeber, Gerard;
Bergmann, Sven;
Dähnhardt, Doreen;
Stöckl, Andrea;
Kiechl, Stefan;
Raitakari, Olli T.;
Kähönen, Mika

Publication type:

Article

Nanopore sequencing with unique molecular identifiers enables accurate mutation analysis and haplotyping in the complex lipoprotein(a) KIV-2 VNTR.

Published in:

Genome Medicine, 2024, v. 16, n. 1, p. 1, doi. 10.1186/s13073-024-01391-8

By:

Amstler, Stephan;
Streiter, Gertraud;
Pfurtscheller, Cathrin;
Forer, Lukas;
Di Maio, Silvia;
Weissensteiner, Hansi;
Paulweber, Bernhard;
Schönherr, Sebastian;
Kronenberg, Florian;
Coassin, Stefan

Publication type:

Article

Validation of Next-Generation Sequencing of Entire Mitochondrial Genomes and the Diversity of Mitochondrial DNA Mutations in Oral Squamous Cell Carcinoma.

Published in:

PLoS ONE, 2015, v. 10, n. 8, p. 1, doi. 10.1371/journal.pone.0135643

By:

Kloss-Brandstätter, Anita;
Weissensteiner, Hansi;
Erhart, Gertraud;
Schäfer, Georg;
Forer, Lukas;
Schönherr, Sebastian;
Pacher, Dominic;
Seifarth, Christof;
Stöckl, Andrea;
Fendt, Liane;
Sottsas, Irma;
Klocker, Helmut;
Huck, Christian W.;
Rasse, Michael;
Kronenberg, Florian;
Kloss, Frank R.

Publication type:

Article

SNPflow: A Lightweight Application for the Processing, Storing and Automatic Quality Checking of Genotyping Assays.

Published in:

PLoS ONE, 2013, v. 8, n. 3, p. 1, doi. 10.1371/journal.pone.0059508

By:

Weissensteiner, Hansi;
Haun, Margot;
Schönherr, Sebastian;
Neuner, Mathias;
Forer, Lukas;
Specht, Günther;
Kloss-Brandstätter, Anita;
Kronenberg, Florian;
Coassin, Stefan

Publication type:

Article

Experiences with workflows for automating data-intensive bioinformatics.

Published in:

Biology Direct, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s13062-015-0071-8

By:

Spjuth, Ola;
Bongcam-Rudloff, Erik;
Carrasco Hernández, Guillermo;
Forer, Lukas;
Giovacchini, Mario;
Guimera, Roman Valls;
Kallio, Aleksi;
Korpelainen, Eija;
Kańduła, Maciej M.;
Krachunov, Milko;
Kreil, David P.;
Kulev, Ognyan;
Łabaj, Paweł P.;
Lampa, Samuel;
Pireddu, Luca;
Schönherr, Sebastian;
Siretskiy, Alexey;
Vassilev, Dimitar

Publication type:

Article

Experiences with workflows for automating data-intensive bioinformatics.

Published in:

Biology Direct, 2015, v. 10, n. 1, p. 43, doi. 10.1186/s13062-015-0071-8

By:

Spjuth, Ola;
Bongcam-Rudloff, Erik;
Carrasco Hernández, Guillermo;
Forer, Lukas;
Giovacchini, Mario;
Guimera, Roman Valls;
Kallio, Aleksi;
Korpelainen, Eija;
Kańduła, Maciej M.;
Krachunov, Milko;
Kreil, David P.;
Kulev, Ognyan;
Łabaj, Paweł P.;
Lampa, Samuel;
Pireddu, Luca;
Schönherr, Sebastian;
Siretskiy, Alexey;
Vassilev, Dimitar

Publication type:

Article

A polygenic and family risk score are both independently associated with risk of type 2 diabetes in a population-based study.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-31496-w

By:

Duschek, Elena;
Forer, Lukas;
Schönherr, Sebastian;
Gieger, Christian;
Peters, Annette;
Kronenberg, Florian;
Grallert, Harald;
Lamina, Claudia

Publication type:

Article

Imputation Server PGS: an automated approach to calculate polygenic risk scores on imputation servers.

Published in:

Nucleic Acids Research, 2024, v. 52, n. W1, p. W70, doi. 10.1093/nar/gkae331

By:

Forer, Lukas;
Taliun, Daniel;
LeFaive, Jonathon;
Smith, Albert V;
Boughton, Andrew P;
Coassin, Stefan;
Lamina, Claudia;
Kronenberg, Florian;
Fuchsberger, Christian;
Schönherr, Sebastian

Publication type:

Article

mtDNA-Server 2: advancing mitochondrial DNA analysis through highly parallelized data processing and interactive analytics.

Published in:

Nucleic Acids Research, 2024, v. 52, n. W1, p. W102, doi. 10.1093/nar/gkae296

By:

Weissensteiner, Hansi;
Forer, Lukas;
Kronenberg, Florian;
Schönherr, Sebastian

Publication type:

Article

Haplogrep 3 - an interactive haplogroup classification and analysis platform.

Published in:

Nucleic Acids Research, 2023, v. 51, n. W1, p. W263, doi. 10.1093/nar/gkad284

By:

Schönherr, Sebastian;
Weissensteiner, Hansi;
Kronenberg, Florian;
Forer, Lukas

Publication type:

Article

A novel but frequent variant in LPA KIV-2 is associated with a pronounced Lp(a) and cardiovascular risk reduction.

Published in:

European Heart Journal, 2017, v. 38, n. 23, p. 1823, doi. 10.1093/eurheartj/ehx174

By:

Coassin, Stefan;
Erhart, Gertraud;
Weissensteiner, Hansi;
de Araújo, Mariana Eca Guimarães;
Lamina, Claudia;
Schönherr, Sebastian;
Forer, Lukas;
Haun, Margot;
Losso, Jamie Lee;
Köttgen, Anna;
Schmidt, Konrad;
Utermann, Gerd;
Peters, Annette;
Gieger, Christian;
Strauch, Konstantin;
Finkenstedt, Armin;
Bale, Reto;
Zoller, Heinz;
Paulweber, Bernhard;
Eckardt, Kai-Uwe

Publication type:

Article