Works by Fonseca, Vagner

Results: 59
    1

    Tracing the evolution of the chikungunya virus in Argentina, 2016-2023: independent introductions and prominence of Latin American lineages.

    Published in:
    Emerging Microbes & Infections, 2024, v. 13, n. 1, p. 1, doi. 10.1080/22221751.2024.2362941
    By:
    • Fabbri, Cintia;
    • Giovanetti, Marta;
    • Luppo, Victoria;
    • Fonseca, Vagner;
    • Garcia, Jorge;
    • Barulli, Cintia;
    • Feroci, Mariel;
    • Perrone, Sofia;
    • Casoni, Doraldina;
    • Giamperetti, Sergio;
    • Alvarez Lopez, Maria Cristina;
    • Foussal, Maria Delia;
    • Figueredo, Mauricio;
    • Salvatierra, Karina;
    • Lejona, Sergio;
    • Diaz, Natalia Ruiz;
    • Castro, Gonzalo;
    • Bravo, Gabriela;
    • Jackel, Noelia;
    • Sen, Carina
    Publication type:
    Article
    2

    Genomic and eco-epidemiological investigations in Uruguay reveal local Chikungunya virus transmission dynamics during its expansion across the Americas in 2023.

    Published in:
    Emerging Microbes & Infections, 2024, v. 13, n. 1, p. 1, doi. 10.1080/22221751.2024.2332672
    By:
    • Burgueño, Analía;
    • Giovanetti, Marta;
    • Fonseca, Vagner;
    • Morel, Noelia;
    • Lima, Mauricio;
    • Castro, Emerson;
    • Guimarães, Natália R.;
    • Iani, Felipe C. M.;
    • Bormida, Victoria;
    • Cortinas, Maria Noel;
    • Ramas, Viviana;
    • Coppola, Leticia;
    • Bento, Ana I.;
    • Franco, Leticia;
    • Mendez Rico, Jairo;
    • Lourenço, José;
    • Alcantara, Luiz Carlos Junior;
    • Chiparelli, Hector
    Publication type:
    Article
    3

    The ongoing COVID-19 epidemic in Minas Gerais, Brazil: insights from epidemiological data and SARS-CoV-2 whole genome sequencing.

    Published in:
    Emerging Microbes & Infections, 2020, v. 9, n. 1, p. 1824, doi. 10.1080/22221751.2020.1803146
    By:
    • Xavier, Joilson;
    • Giovanetti, Marta;
    • Adelino, Talita;
    • Fonseca, Vagner;
    • Barbosa da Costa, Alana Vitor;
    • Ribeiro, Adriana Aparecida;
    • Felicio, Katlin Nascimento;
    • Duarte, Clara Guerra;
    • Ferreira Silva, Marcos Vinicius;
    • Salgado, Álvaro;
    • Lima, Mauricio Teixeira;
    • de Jesus, Ronaldo;
    • Fabri, Allison;
    • Soares Zoboli, Cristiane Franco;
    • Souza Santos, Thales Gutemberg;
    • Iani, Felipe;
    • Ciccozzi, Massimo;
    • Bispo de Filippis, Ana Maria;
    • Teixeira de Siqueira, Marilda Agudo Mendonça;
    • de Abreu, André Luiz
    Publication type:
    Article
    4

    Return of the founder Chikungunya virus to its place of introduction into Brazil is revealed by genomic characterization of exanthematic disease cases.

    Published in:
    2020
    By:
    • Pereira Gusmão Maia, Zuinara;
    • Mota Pereira, Felicidade;
    • do Carmo Said, Rodrigo Fabiano;
    • Fonseca, Vagner;
    • Gräf, Tiago;
    • de Bruycker Nogueira, Fernanda;
    • Brandão Nardy, Vanessa;
    • Xavier, Joilson;
    • Lima Maia, Maricelia;
    • Abreu, André L.;
    • Campelo de Albuquerque, Carlos F.;
    • Kleber Oliveira, Wanderson;
    • Croda, Julio;
    • de Filippis, Ana Maria Bispo;
    • Venancio Cunha, Rivaldo;
    • Lourenço, Jose;
    • de Oliveira, Tulio;
    • Faria, Nuno Rodrigues;
    • Junior Alcantara, Luiz Carlos;
    • Giovanetti, Marta
    Publication type:
    Letter
    5

    The ongoing COVID-19 epidemic in Minas Gerais, Brazil: insights from epidemiological data and SARS-CoV-2 whole genome sequencing.

    Published in:
    Emerging Microbes & Infections, 2020, v. 9, n. 1, p. 1824, doi. 10.1080/22221751.2020.1803146
    By:
    • Xavier, Joilson;
    • Giovanetti, Marta;
    • Adelino, Talita;
    • Fonseca, Vagner;
    • da Costa, Alana Vitor Barbosa;
    • Ribeiro, Adriana Aparecida;
    • Felicio, Katlin Nascimento;
    • Duarte, Clara Guerra;
    • Silva, Marcos Vinicius Ferreira;
    • Salgado, Álvaro;
    • Lima, Mauricio Teixeira;
    • de Jesus, Ronaldo;
    • Fabri, Allison;
    • Zoboli, Cristiane Franco Soares;
    • Santos, Thales Gutemberg Souza;
    • Iani, Felipe;
    • Ciccozzi, Massimo;
    • de Filippis, Ana Maria Bispo;
    • de Siqueira, Marilda Agudo Mendonça Teixeira;
    • de Abreu, André Luiz
    Publication type:
    Article
    6

    Return of the founder Chikungunya virus to its place of introduction into Brazil is revealed by genomic characterization of exanthematic disease cases.

    Published in:
    Emerging Microbes & Infections, 2020, v. 9, n. 1, p. 53, doi. 10.1080/22221751.2019.1701954
    By:
    • Maia, Zuinara Pereira Gusmão;
    • Pereira, Felicidade Mota;
    • do Carmo Said, Rodrigo Fabiano;
    • Fonseca, Vagner;
    • Gräf, Tiago;
    • de Bruycker Nogueira, Fernanda;
    • Nardy, Vanessa Brandão;
    • Xavier, Joilson;
    • Maia, Maricelia Lima;
    • Abreu, André L.;
    • de Albuquerque, Carlos F. Campelo;
    • Oliveira, Wanderson Kleber;
    • Croda, Julio;
    • Filippis, Ana Maria Bispo;
    • Cunha, Rivaldo Venancio;
    • Lourenço, Jose;
    • de Oliveira, Tulio;
    • Faria, Nuno Rodrigues;
    • Alcantara, Luiz Carlos Junior;
    • Giovanetti, Marta
    Publication type:
    Article
    7

    Exploring Dengue Infection in a Vaccinated Individual: Preliminary Molecular Diagnosis and Sequencing Insights.

    Published in:
    Viruses (1999-4915), 2024, v. 16, n. 10, p. 1603, doi. 10.3390/v16101603
    By:
    • Adelino, Talita Émile Ribeiro;
    • Pedroso, Sílvia Helena Sousa Pietra;
    • Lima, Maurício;
    • Tomé, Luiz Marcelo Ribeiro;
    • Guimarães, Natália Rocha;
    • Fonseca, Vagner;
    • Silva, Paulo Eduardo de Souza da;
    • Moreno, Keldenn Melo Farias;
    • Silva, Ana Cândida Araújo e;
    • Pinheiro, Náthale Rodrigues;
    • Souza, Carolina Senra Alves de;
    • Alcantara, Luiz Carlos Junior;
    • Giovanetti, Marta;
    • Iani, Felipe Campos de Melo
    Publication type:
    Article
    8

    Insights into SARS-CoV-2 Surveillance among Prison Populations in Mato Grosso do Sul, Brazil, in 2022.

    Published in:
    Viruses (1999-4915), 2024, v. 16, n. 7, p. 1143, doi. 10.3390/v16071143
    By:
    • Ferreira da Silva, Liliane;
    • Alcantara, Luiz Carlos Junior;
    • Fonseca, Vagner;
    • Frias, Diego;
    • Umaki Zardin, Marina Castilhos Souza;
    • de Castro Lichs, Gislene Garcia;
    • Esposito, Ana Olivia Pascoto;
    • Xavier, Joilson;
    • Fritsch, Hegger;
    • Lima, Mauricio;
    • de Oliveira, Carla;
    • Castilho de Arruda, Larissa Domingues;
    • Maziero, Livia de Mello Almeida;
    • Rodrigues Barretos, Ellen Caroline;
    • Tsuha Oshiro, Paulo Eduardo;
    • Gimenes Mendes Menezes, Evellyn Fernanda;
    • de Freitas Cardoso, Lucélia;
    • Ferreira Lemos, Everton;
    • Lourenço, José;
    • de Albuquerque, Carlos F. C.
    Publication type:
    Article
    9

    Exploring the Genomic Dynamics of the Monkeypox Epidemic in Paraguay.

    Published in:
    Viruses (1999-4915), 2024, v. 16, n. 1, p. 83, doi. 10.3390/v16010083
    By:
    • Vazquez, Cynthia;
    • Fonseca, Vagner;
    • de la Fuente, Andrea Gomez;
    • Gonzalez, Sandra;
    • Fleitas, Fatima;
    • Lima, Mauricio;
    • Guimarães, Natália R.;
    • Iani, Felipe C. M.;
    • Rojas, Analia;
    • Alfonso, Tania;
    • Cantero, Cesar;
    • Barrios, Julio;
    • Villalba, Shirley;
    • Ortega, Maria Jose;
    • Torales, Juan;
    • Gamarra, Maria Liz;
    • Aquino, Carolina;
    • Franco, Leticia;
    • Rico, Jairo Mendez;
    • Alcantara, Luiz Carlos Junior
    Publication type:
    Article
    10

    A Multiplex Nanopore Sequencing Approach for the Detection of Multiple Arboviral Species.

    Published in:
    Viruses (1999-4915), 2024, v. 16, n. 1, p. 23, doi. 10.3390/v16010023
    By:
    • Xavier, Joilson;
    • Fonseca, Vagner;
    • Adelino, Talita;
    • Iani, Felipe C. M.;
    • Pereira, Glauco C.;
    • Duarte, Myrian M.;
    • Lima, Mauricio;
    • Castro, Emerson;
    • Oliveira, Carla;
    • Fritsch, Hegger;
    • Guimarães, Natalia;
    • Lamounier, Ludmila O.;
    • Barreto, Fernanda Khouri;
    • Braga de Oliveira, Camilo M. M.;
    • Maymone Gonçalves, Crhistinne C.;
    • Malta Lima, Danielle;
    • de Oliveira, Elaine C.;
    • de Castro Lichs, Gislene G.;
    • Gomes, Iago;
    • Mazaro, Janaina
    Publication type:
    Article
    11

    Genomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria: Insights from a Three-Year Pandemic Analysis.

    Published in:
    Viruses (1999-4915), 2023, v. 15, n. 9, p. 1924, doi. 10.3390/v15091924
    By:
    • Giovanetti, Marta;
    • Cella, Eleonora;
    • Ivanov, Ivan;
    • Grigorova, Lyubomira;
    • Stoikov, Ivan;
    • Donchev, Deyan;
    • Dimitrova, Reneta;
    • Slavov, Svetoslav Nanev;
    • Mavian, Carla;
    • Fonseca, Vagner;
    • Scarpa, Fabio;
    • Borsetti, Alessandra;
    • Korsun, Neli;
    • Trifonova, Ivelina;
    • Dobrinov, Veselin;
    • Kantardjiev, Todor;
    • Christova, Iva;
    • Ciccozzi, Massimo;
    • Alexiev, Ivailo
    Publication type:
    Article
    12

    Dengue Fever Surveillance in Mato Grosso do Sul: Insights from Genomic Analysis and Implications for Public Health Strategies.

    Published in:
    Viruses (1999-4915), 2023, v. 15, n. 9, p. 1790, doi. 10.3390/v15091790
    By:
    • Castilho de Arruda, Larissa Domingues;
    • Giovanetti, Marta;
    • Fonseca, Vagner;
    • Zardin, Marina Castilhos Souza Umaki;
    • Lichs, Gislene Garcia de Castro;
    • Asato, Silvia;
    • Esposito, Ana Olivia Pascoto;
    • Tokeshi Müller, Miriam;
    • Xavier, Joilson;
    • Fritsch, Hegger;
    • Lima, Mauricio;
    • de Oliveira, Carla;
    • Santos, Elaine Vieira;
    • Maziero, Livia de Mello Almeida;
    • Frias, Danila Fernanda Rodrigues;
    • Ahad das Neves, Danielle;
    • Ferreira da Silva, Liliane;
    • Rodrigues Barretos, Ellen Caroline;
    • Tsuha Oshiro, Paulo Eduardo;
    • Modafari Goday, Bianca
    Publication type:
    Article
    13

    Unveiling the Impact of the Omicron Variant: Insights from Genomic Surveillance in Mato Grosso do Sul, Midwest Brazil.

    Published in:
    Viruses (1999-4915), 2023, v. 15, n. 7, p. 1604, doi. 10.3390/v15071604
    By:
    • de Mello Almeida Maziero, Lívia;
    • Giovanetti, Marta;
    • Fonseca, Vagner;
    • Zardin, Marina Castilhos Souza Umaki;
    • de Castro Lichs, Gislene Garcia;
    • de Rezende Romera, Grazielli Rocha;
    • Tsuha, Daniel Henrique;
    • Frias, Danila Fernanda Rodrigues;
    • Escandolhero, Valdir Castanho;
    • Demarchi, Luiz Henrique;
    • Domingues Castilho, Larissa;
    • Barbosa, Karine Ferreira;
    • Tebet, Danielle Galindo Martins;
    • Xavier, Joilson;
    • Fritsch, Hegger;
    • Lima, Mauricio;
    • de Oliveira, Carla;
    • Santos, Elaine Vieira;
    • Kashima, Simone;
    • Said, Rodrigo Fabiano do Carmo
    Publication type:
    Article
    14

    Retrospective Spatio-Temporal Dynamics of Dengue Virus 1, 2 and 4 in Paraguay.

    Published in:
    Viruses (1999-4915), 2023, v. 15, n. 6, p. 1275, doi. 10.3390/v15061275
    By:
    • Vazquez, Cynthia;
    • Alcantara, Luiz Carlos Junior;
    • Fonseca, Vagner;
    • Lima, Mauricio;
    • Xavier, Joilson;
    • Adelino, Talita;
    • Fritsch, Hegger;
    • Castro, Emerson;
    • de Oliveira, Carla;
    • Schuab, Gabriel;
    • Lima, Alex Ranieri Jerônimo;
    • Villalba, Shirley;
    • Gomez de la Fuente, Andrea;
    • Rojas, Analia;
    • Cantero, Cesar;
    • Fleitas, Fatima;
    • Aquino, Carolina;
    • Ojeda, Andrea;
    • Sequera, Guillermo;
    • Torales, Juan
    Publication type:
    Article
    15

    Phylogenetic Reconstructions Reveal the Circulation of a Novel Dengue Virus-1V Clade and the Persistence of a Dengue Virus-2 III Genotype in Northeast Brazil.

    Published in:
    Viruses (1999-4915), 2023, v. 15, n. 5, p. 1073, doi. 10.3390/v15051073
    By:
    • Fritsch, Hegger;
    • Moreno, Keldenn;
    • Lima, Italo Andrade Barbosa;
    • Santos, Cleiton Silva;
    • Costa, Bernardo Gratival Gouvea;
    • de Almeida, Breno Lima;
    • dos Santos, Ronald Alves;
    • Francisco, Marcos Vinicius Lima de Oliveira;
    • Sampaio, Maria Paula Souza;
    • de Lima, Maricelia Maia;
    • Pereira, Felicidade Mota;
    • Fonseca, Vagner;
    • Tosta, Stephane;
    • Xavier, Joilson;
    • de Oliveira, Carla;
    • Adelino, Talita;
    • de Mello, Arabela Leal e Silva;
    • Gräf, Tiago;
    • Alcantara, Luiz Carlos Junior;
    • Giovanetti, Marta
    Publication type:
    Article
    16

    Dynamics of SARS-CoV-2 Variants of Concern in Vaccination Model City in the State of Sao Paulo, Brazil.

    Published in:
    Viruses (1999-4915), 2022, v. 14, n. 10, p. N.PAG, doi. 10.3390/v14102148
    By:
    • Slavov, Svetoslav Nanev;
    • de La-Roque, Debora Glenda Lima;
    • da Costa, Pericles Natan Mendes;
    • Rodrigues, Evandra Strazza;
    • Santos, Elaine Vieira;
    • Borges, Josiane Serrano;
    • Evaristo, Mariane;
    • de Matos Maçonetto, Juliana;
    • Marques, Adriana Aparecida;
    • Milhomens, Jonathan;
    • Rós, Felipe Augusto;
    • Fonseca, Vagner;
    • Lima, Alex Ranieri Jerônimo;
    • Ribeiro, Gabriela;
    • Lima, Loyze Paola Oliveira de;
    • Garibaldi, Pedro Manuel Marques;
    • Ferreira, Natasha Nicos;
    • Moraes, Glenda Renata;
    • Marqueze, Elaine Cristina;
    • Barros, Claudia Renata dos Santos
    Publication type:
    Article
    17

    Retrospective Investigation in Horses with Encephalitis Reveals Unnoticed Circulation of West Nile Virus in Brazil.

    Published in:
    Viruses (1999-4915), 2022, v. 14, n. 7, p. N.PAG, doi. 10.3390/v14071540
    By:
    • Fritsch, Hegger;
    • Pereira, Felicidade Mota;
    • Costa, Erica Azevedo;
    • Fonseca, Vagner;
    • Tosta, Stephane;
    • Xavier, Joilson;
    • Levy, Flavia;
    • Oliveira, Carla de;
    • Menezes, Gabriela;
    • Lima, Jaqueline;
    • Santos, Lenisa;
    • Silva, Luciana;
    • Nardy, Vanessa;
    • Astete, Marcela Kelly Gómez;
    • Santos, Beatriz Senra Álvares da Silva;
    • Aguiar, Nágila Rocha;
    • Guedes, Maria Isabel Maldonado Coelho;
    • Faria, Guilherme Canhestro de;
    • Furtini, Ronaldo;
    • Drumond, Safira Rachel Milanez
    Publication type:
    Article
    18

    Dengue Virus Serotype 2 Intrahost Diversity in Patients with Different Clinical Outcomes.

    Published in:
    Viruses (1999-4915), 2021, v. 13, n. 2, p. 349, doi. 10.3390/v13020349
    By:
    • Torres, Maria Celeste;
    • Lima de Mendonça, Marcos Cesar;
    • Damasceno dos Santos Rodrigues, Cintia;
    • Fonseca, Vagner;
    • Ribeiro, Mario Sergio;
    • Brandão, Ana Paula;
    • Venâncio da Cunha, Rivaldo;
    • Dias, Ana Isabel;
    • Santos Vilas Boas, Lucy;
    • Felix, Alvina Clara;
    • Alves Pereira, Maira;
    • de Oliveira Pinto, Luzia Maria;
    • Sakuntabhai, Anavaj;
    • Bispo de Filippis, Ana Maria;
    • Musso, Didier
    Publication type:
    Article
    19

    SARS-CoV-2 shifting transmission dynamics and hidden reservoirs potentially limit efficacy of public health interventions in Italy.

    Published in:
    Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02025-0
    By:
    • Giovanetti, Marta;
    • Cella, Eleonora;
    • Benedetti, Francesca;
    • Rife Magalis, Brittany;
    • Fonseca, Vagner;
    • Fabris, Silvia;
    • Campisi, Giovanni;
    • Ciccozzi, Alessandra;
    • Angeletti, Silvia;
    • Borsetti, Alessandra;
    • Tambone, Vittoradolfo;
    • Sagnelli, Caterina;
    • Pascarella, Stefano;
    • Riva, Alberto;
    • Ceccarelli, Giancarlo;
    • Marcello, Alessandro;
    • Azarian, Taj;
    • Wilkinson, Eduan;
    • de Oliveira, Tulio;
    • Alcantara, Luiz Carlos Junior
    Publication type:
    Article
    20

    Genomic characterization of SARS-CoV-2 from an indigenous reserve in Mato Grosso do Sul, Brazil.

    Published in:
    Frontiers in Public Health, 2024, p. 1, doi. 10.3389/fpubh.2023.1195779
    By:
    • Albuquerque de Oliveira, Laís;
    • Mauricio de Rezende, Izabela;
    • João Navarini, Vinicius;
    • Beutinger Marchioro, Silvana;
    • Leite Torres, Alex José;
    • Croda, Julio;
    • Garcia Croda, Mariana;
    • Maymone Gonçalves, Crhistinne Cavalheiro;
    • Xavier, Joilson;
    • de Castro, Emerson;
    • Lima, Mauricio;
    • Iani, Felipe;
    • Adelino, Talita;
    • Aburjaile, Flávia;
    • Ferraz Demarchi, Luiz Henrique;
    • Ledesma Taira, Deborah;
    • Souza Umaki Zardin, Marina Castilhos;
    • Fonseca, Vagner;
    • Giovanetti, Marta;
    • Andrews, Jason
    Publication type:
    Article
    21
    22

    Persistence of chikungunya ECSA genotype and local outbreak in an upper medium class neighborhood in Northeast Brazil.

    Published in:
    PLoS ONE, 2020, v. 15, n. 1, p. 1, doi. 10.1371/journal.pone.0226098
    By:
    • Goes de Jesus, Jaqueline;
    • da Luz Wallau, Gabriel;
    • Lima Maia, Maricelia;
    • Xavier, Joilson;
    • Oliveira Lima, Maria Aparecida;
    • Fonseca, Vagner;
    • Salgado de Abreu, Alvaro;
    • Fraga de Oliveira Tosta, Stephane;
    • Ramos do Amaral, Helineide;
    • Andrade Barbosa Lima, Italo;
    • Viana Silva, Paloma;
    • Carlos dos Santos, Daiana;
    • Sousa de Oliveira, Aline;
    • Campos de Souza, Siane;
    • Barreto Falcão, Melissa;
    • Cerqueira, Erenilde;
    • Ceschini Machado, Laís;
    • Sobral, Mariana Carolina;
    • Teodoro Rezende, Tatiana Maria;
    • Ribeiro Pereira, Mylena
    Publication type:
    Article
    23

    North–south pathways, emerging variants, and high climate suitability characterize the recent spread of dengue virus serotypes 2 and 3 in the Dominican Republic.

    Published in:
    BMC Infectious Diseases, 2024, v. 24, n. 1, p. 1, doi. 10.1186/s12879-024-09658-6
    By:
    • Miguel, Isaac;
    • Feliz, Edwin P.;
    • Agramonte, Robinson;
    • Martinez, Pedro V.;
    • Vergara, Carlos;
    • Imbert, Yvonne;
    • De la Cruz, Lucia;
    • de Castro, Nurys;
    • Cedano, Odalis;
    • De la Paz, Yamilka;
    • Fonseca, Vagner;
    • Santiago, Gilberto A.;
    • Muñoz-Jordán, Jorge L.;
    • Peguero, Armando;
    • Paulino-Ramírez, Robert;
    • Grubaugh, Nathan D.;
    • de Filippis, Ana Maria Bispo;
    • Alcantara, Luiz Carlos Junior;
    • Rico, Jairo Mendez;
    • Lourenço, José
    Publication type:
    Article
    24

    A new lineage nomenclature to aid genomic surveillance of dengue virus.

    Published in:
    PLoS Biology, 2024, v. 22, n. 9, p. 1, doi. 10.1371/journal.pbio.3002834
    By:
    • Hill, Verity;
    • Cleemput, Sara;
    • Pereira, James Siqueira;
    • Gifford, Robert J.;
    • Fonseca, Vagner;
    • Tegally, Houriiyah;
    • Brito, Anderson F.;
    • Ribeiro, Gabriela;
    • de Souza, Vinicius Carius;
    • Brcko, Isabela Carvalho;
    • Ribeiro, Igor Santana;
    • De Lima, Iago Trezena Tavares;
    • Slavov, Svetoslav Nanev;
    • Sampaio, Sandra Coccuzzo;
    • Elias, Maria Carolina;
    • Tran, Vi Thuy;
    • Kien, Duong Thi Hue;
    • Huynh, Tuyen;
    • Yacoub, Sophie;
    • Dieng, Idrissa
    Publication type:
    Article
    25

    Whole Genome Sequencing of SARS-CoV-2: Adapting Illumina Protocols for Quick and Accurate Outbreak Investigation during a Pandemic.

    Published in:
    Genes, 2020, v. 11, n. 8, p. 949, doi. 10.3390/genes11080949
    By:
    • Pillay, Sureshnee;
    • Giandhari, Jennifer;
    • Tegally, Houriiyah;
    • Wilkinson, Eduan;
    • Chimukangara, Benjamin;
    • Lessells, Richard;
    • Moosa, Yunus;
    • Mattison, Stacey;
    • Gazy, Inbal;
    • Fish, Maryam;
    • Singh, Lavanya;
    • Khanyile, Khulekani Sedwell;
    • San, James Emmanuel;
    • Fonseca, Vagner;
    • Giovanetti, Marta;
    • Alcantara, Luiz Carlos;
    • de Oliveira, Tulio
    Publication type:
    Article
    26
    27

    Short Report: Early genomic detection of SARS-CoV-2 P.1 variant in Northeast Brazil.

    Published in:
    PLoS Neglected Tropical Diseases, 2021, v. 15, n. 7, p. 1, doi. 10.1371/journal.pntd.0009591
    By:
    • Tosta, Stephane;
    • Giovanetti, Marta;
    • Brandão Nardy, Vanessa;
    • Reboredo de Oliveira da Silva, Luciana;
    • Kelly Astete Gómez, Marcela;
    • Gomes Lima, Jaqueline;
    • Wanderley Cardoso, Cristiane;
    • Oliveira Silva, Tarcisio;
    • São Pedro Leal de Souza, Marcia;
    • Presta Dia, Pedro Henrique;
    • Fonseca, Vagner;
    • de Oliveira, Tulio;
    • Lourenço, José;
    • Carlos Junior Alcantara, Luiz;
    • Pereira, Felicidade;
    • Leal, Arabela
    Publication type:
    Article
    28

    Short report: Introduction of chikungunya virus ECSA genotype into the Brazilian Midwest and its dispersion through the Americas.

    Published in:
    PLoS Neglected Tropical Diseases, 2021, v. 15, n. 4, p. 1, doi. 10.1371/journal.pntd.0009290
    By:
    • de Oliveira, Elaine Cristina;
    • Fonseca, Vagner;
    • Xavier, Joilson;
    • Adelino, Talita;
    • Morales Claro, Ingra;
    • Fabri, Allison;
    • Marques Macario, Eduardo;
    • Viniski, Ana Elisa;
    • Campos Souza, Claudio Luis;
    • Gomes da Costa, Evanil Sebastiana;
    • Soares de Sousa, Claudia;
    • Guimarães Dias Duarte, Flávia;
    • Correia de Medeiros, Arnaldo;
    • Campelo de Albuquerque, Carlos F.;
    • Venancio Cunha, Rivaldo;
    • Oliveira De Moura, Noely Fabiana;
    • Bispo de Filippis, Ana Maria;
    • Oliveira, Tulio de;
    • Lourenço, José;
    • de Abreu, André Luiz
    Publication type:
    Article
    29
    30
    31
    32

    Increased interregional virus exchange and nucleotide diversity outline the expansion of chikungunya virus in Brazil.

    Published in:
    Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40099-y
    By:
    • Xavier, Joilson;
    • Alcantara, Luiz Carlos Junior;
    • Fonseca, Vagner;
    • Lima, Mauricio;
    • Castro, Emerson;
    • Fritsch, Hegger;
    • Oliveira, Carla;
    • Guimarães, Natalia;
    • Adelino, Talita;
    • Evaristo, Mariane;
    • Rodrigues, Evandra S.;
    • Santos, Elaine Vieira;
    • de La-Roque, Debora;
    • de Moraes, Laise;
    • Tosta, Stephane;
    • Neto, Adelino;
    • Rosewell, Alexander;
    • Mendonça, Ana Flavia;
    • Leite, Anderson;
    • Vasconcelos, Andreza
    Publication type:
    Article
    33

    Correction: Short Report: Early genomic detection of SARS-CoV-2 P.1 variant in Northeast Brazil.

    Published in:
    2022
    By:
    • Tosta, Stephane;
    • Giovanetti, Marta;
    • Brandão Nardy, Vanessa;
    • Reboredo de Oliveira da Silva, Luciana;
    • Kelly Astete Gómez, Marcela;
    • Gomes Lima, Jaqueline;
    • Wanderley Cardoso, Cristiane;
    • Oliveira Silva, Tarcisio;
    • São Pedro Leal de Souza, Marcia;
    • Presta Dias, Pedro Henrique;
    • Fonseca, Vagner;
    • de Oliveira, Tulio;
    • Lourenço, José;
    • Carlos Junior Alcantara, Luiz;
    • Pereira, Felicidade;
    • Leal, Arabela
    Publication type:
    Correction Notice
    34

    The Importance of Entomo-Virological Investigation of Yellow Fever Virus to Strengthen Surveillance in Brazil.

    Published in:
    Tropical Medicine & Infectious Disease, 2023, v. 8, n. 6, p. 329, doi. 10.3390/tropicalmed8060329
    By:
    • Cruz, Ana Cecília Ribeiro;
    • Hernández, Leonardo Henrique Almeida;
    • Aragão, Carine Fortes;
    • da Paz, Thito Yan Bezerra;
    • da Silva, Sandro Patroca;
    • da Silva, Fábio Silva;
    • de Aquino, Ana Alice;
    • Cereja, Glennda Juscely Galvão Pereira;
    • Nascimento, Bruna Lais Sena do;
    • Rosa Junior, José Wilson;
    • Elias, Carmeci Natalina;
    • Nogueira, Cristiano Gomes;
    • Ramos, Daniel Garkauskas;
    • Fonseca, Vagner;
    • Giovanetti, Marta;
    • Alcantara, Luiz Carlos Junior;
    • Nunes, Bruno Tardelli Diniz;
    • Vasconcelos, Pedro F. da Costa;
    • Martins, Livia Carício;
    • Nunes-Neto, Joaquim Pinto
    Publication type:
    Article
    35

    Circulation of chikungunya virus East/Central/South African lineage in Rio de Janeiro, Brazil.

    Published in:
    PLoS ONE, 2019, v. 14, n. 6, p. 1, doi. 10.1371/journal.pone.0217871
    By:
    • Xavier, Joilson;
    • Giovanetti, Marta;
    • Fonseca, Vagner;
    • Thézé, Julien;
    • Gräf, Tiago;
    • Fabri, Allison;
    • Goes de Jesus, Jaqueline;
    • Lima de Mendonça, Marcos Cesar;
    • Damasceno dos Santos Rodrigues, Cintia;
    • Mares-Guia, Maria Angélica;
    • Cardoso dos Santos, Carolina;
    • Fraga de Oliveira Tosta, Stephane;
    • Candido, Darlan;
    • Ribeiro Nogueira, Rita Maria;
    • Luiz de Abreu, André;
    • Kleber Oliveira, Wanderson;
    • Campelo de Albuquerque, Carlos F.;
    • Chieppe, Alexandre;
    • de Oliveira, Tulio;
    • Brasil, Patrícia
    Publication type:
    Article
    36

    DENV‐1 genotype V circulation during the nonepidemic period in the Northeast of São Paulo State endemic area.

    Published in:
    Journal of Medical Virology, 2024, v. 96, n. 3, p. 1, doi. 10.1002/jmv.29526
    By:
    • de La‐Roque, Debora Glenda Lima;
    • Santos, Elaine Vieira;
    • Oliveira, Renata Aparecida Machado;
    • Slavov, Svetoslav Nanev;
    • Rodrigues, Evandra S.;
    • Fonseca, Vagner;
    • Martins, Antonio Jorge;
    • Giomo, Denise Bergamaschi;
    • Torres, Paula Marilia Afonso;
    • Gentil, Danielle Cristina Dacanal;
    • Catoia, Erika Aparecida;
    • Chiquito, Natalia do Carmo;
    • Medeiros, Alessandra Paula Silva Soares;
    • Yamamoto, Aparecida Y.;
    • Passos, Luzia Márcia Romanholi;
    • Calado, Rodrigo Tocantins;
    • Barros, Claudia Renata Dos Santos;
    • Elias, Maria Carolina;
    • Sampaio, Sandra Coccuzzo;
    • Giovanetti, Marta
    Publication type:
    Article
    37

    Genomic monitoring unveil the early detection of the SARS‐CoV‐2 B.1.351 (beta) variant (20H/501Y.V2) in Brazil.

    Published in:
    Journal of Medical Virology, 2021, v. 93, n. 12, p. 6782, doi. 10.1002/jmv.27190
    By:
    • Slavov, Svetoslav N.;
    • Patané, José S. L.;
    • Bezerra, Rafael dos Santos;
    • Giovanetti, Marta;
    • Fonseca, Vagner;
    • Martins, Antonio J.;
    • Viala, Vincent L.;
    • Rodrigues, Evandra S.;
    • Santos, Elaine V.;
    • Barros, Claudia R. S.;
    • Marqueze, Elaine C.;
    • Santos, Bibiana;
    • Aburjaile, Flavia;
    • Neto, Raul M.;
    • Moretti, Debora B.;
    • Haddad, Ricardo;
    • Calado, Rodrigo T.;
    • Kitajima, João P.;
    • Freitas, Erika;
    • Schlesinger, David
    Publication type:
    Article
    38
    39

    Betacoronaviruses genome analysis reveals evolution toward specific codons usage: Implications for SARS‐CoV‐2 mitigation strategies.

    Published in:
    Journal of Medical Virology, 2021, v. 93, n. 9, p. 5630, doi. 10.1002/jmv.27056
    By:
    • Lopes, Elisson N.;
    • Fonseca, Vagner;
    • Frias, Diego;
    • Tosta, Stephane;
    • Salgado, Álvaro;
    • Assunção Vialle, Ricardo;
    • Paulo Eduardo, Toscano S.;
    • Barreto, Fernanda K.;
    • Ariston de Azevedo, Vasco;
    • Guarino, Michele;
    • Angeletti, Silvia;
    • Ciccozzi, Massimo;
    • Junior Alcantara, Luiz C.;
    • Giovanetti, Marta
    Publication type:
    Article
    40

    Yellow fever transmission in non-human primates, Bahia, Northeastern Brazil.

    Published in:
    PLoS Neglected Tropical Diseases, 2020, v. 14, n. 8, p. 1, doi. 10.1371/journal.pntd.0008405
    By:
    • Goes de Jesus, Jaqueline;
    • Gräf, Tiago;
    • Giovanetti, Marta;
    • Mares-Guia, Maria Angélica;
    • Xavier, Joilson;
    • Lima Maia, Maricelia;
    • Fonseca, Vagner;
    • Fabri, Allison;
    • dos Santos, Roberto Fonseca;
    • Mota Pereira, Felicidade;
    • Ferraz Oliveira Santos, Leandro;
    • Reboredo de Oliveira da Silva, Luciana;
    • Pereira Gusmão Maia, Zuinara;
    • Gomes Cerqueira, Jananci Xavier;
    • Thèze, Julien;
    • Abade, Leandro;
    • Cordeiro, Mirza de Carvalho Santana;
    • Torquato, Sintia Sacramento Cerqueira;
    • Santana, Eloisa Bahia;
    • de Jesus Silva, Neuza Santos
    Publication type:
    Article
    41

    Replacement of the Gamma by the Delta variant in Brazil: Impact of lineage displacement on the ongoing pandemic.

    Published in:
    Virus Evolution, 2022, v. 8, n. 1, p. 1, doi. 10.1093/ve/veac024
    By:
    • Giovanetti, Marta;
    • Fonseca, Vagner;
    • Wilkinson, Eduan;
    • Tegally, Houriiyah;
    • San, Emmanuel James;
    • Althaus, Christian L;
    • Xavier, Joilson;
    • Slavov, Svetoslav Nanev;
    • Viala, Vincent Louis;
    • Lima, Alex Ranieri Jerônimo;
    • Ribeiro, Gabriela;
    • Souza-Neto, Jayme A;
    • Fukumasu, Heidge;
    • Coutinho, Luiz Lehmann;
    • Cunha, Rivaldo Venancio da;
    • Freitas, Carla;
    • Melo, Carlos F Campelo de A e;
    • Araújo, Wildo Navegantes de;
    • Said, Rodrigo Fabiano Do Carmo;
    • Almiron, Maria
    Publication type:
    Article
    42

    Transmission dynamics of SARS-CoV-2 within-host diversity in two major hospital outbreaks in South Africa.

    Published in:
    Virus Evolution, 2021, v. 7, n. 1, p. 1, doi. 10.1093/ve/veab041
    By:
    • San, James E;
    • Ngcapu, Sinaye;
    • Kanzi, Aquillah M;
    • Tegally, Houriiyah;
    • Fonseca, Vagner;
    • Giandhari, Jennifer;
    • Wilkinson, Eduan;
    • Nelson, Chase W;
    • Smidt, Werner;
    • Kiran, Anmol M;
    • Chimukangara, Benjamin;
    • Pillay, Sureshnee;
    • Singh, Lavanya;
    • Fish, Maryam;
    • Gazy, Inbal;
    • Martin, Darren P;
    • Khanyile, Khulekani;
    • Lessells, Richard;
    • Oliveira, Tulio de
    Publication type:
    Article
    43

    Field and classroom initiatives for portable sequence-based monitoring of dengue virus in Brazil.

    Published in:
    Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22607-0
    By:
    • Adelino, Talita Émile Ribeiro;
    • Giovanetti, Marta;
    • Fonseca, Vagner;
    • Xavier, Joilson;
    • de Abreu, Álvaro Salgado;
    • do Nascimento, Valdinete Alves;
    • Demarchi, Luiz Henrique Ferraz;
    • Oliveira, Marluce Aparecida Assunção;
    • da Silva, Vinícius Lemes;
    • de Mello, Arabela Leal e. Silva;
    • Cunha, Gabriel Muricy;
    • Santos, Roselene Hans;
    • de Oliveira, Elaine Cristina;
    • Júnior, Jorge Antônio Chamon;
    • de Melo Iani, Felipe Campos;
    • de Filippis, Ana Maria Bispo;
    • de Abreu, André Luiz;
    • de Jesus, Ronaldo;
    • de Albuquerque, Carlos Frederico Campelo;
    • Rico, Jairo Mendez
    Publication type:
    Article
    44

    A computational method for the identification of Dengue, Zika and Chikungunya virus species and genotypes.

    Published in:
    PLoS Neglected Tropical Diseases, 2019, v. 13, n. 5, p. 1, doi. 10.1371/journal.pntd.0007231
    By:
    • Fonseca, Vagner;
    • Libin, Pieter J. K.;
    • Theys, Kristof;
    • Faria, Nuno R.;
    • Nunes, Marcio R. T.;
    • Restovic, Maria I.;
    • Freire, Murilo;
    • Giovanetti, Marta;
    • Cuypers, Lize;
    • Nowé, Ann;
    • Abecasis, Ana;
    • Deforche, Koen;
    • Santiago, Gilberto A.;
    • Siqueira, Isadora C. de;
    • San, Emmanuel J.;
    • Machado, Kaliane C. B.;
    • Azevedo, Vasco;
    • Filippis, Ana Maria Bispo-de;
    • Cunha, Rivaldo Venâncio da;
    • Pybus, Oliver G.
    Publication type:
    Article
    45

    Detection of Multiple Human Viruses, including Mpox, Using a Wastewater Surveillance Approach in Brazil.

    Published in:
    Pathogens, 2024, v. 13, n. 7, p. 589, doi. 10.3390/pathogens13070589
    By:
    • Calabria de Araujo, Juliana;
    • Carvalho, Ana Paula Assad;
    • Leal, Cintia D.;
    • Natividade, Manuelle;
    • Borin, Marcus;
    • Guerra, Augusto;
    • Carobin, Natália;
    • Sabino, Adriano;
    • Almada, Mariana;
    • Costa, Maria Cristina M.;
    • Saia, Flavia;
    • Frutuoso, Livia V.;
    • Iani, Felipe C. M.;
    • Adelino, Talita;
    • Fonseca, Vagner;
    • Giovanetti, Marta;
    • Alcantara, Luiz Carlos Junior
    Publication type:
    Article
    46

    Resurgence of Dengue Virus Serotype 3 in Minas Gerais, Brazil: A Case Report.

    Published in:
    Pathogens, 2024, v. 13, n. 3, p. 202, doi. 10.3390/pathogens13030202
    By:
    • Adelino, Talita;
    • Lima, Maurício;
    • Guimarães, Natália R.;
    • Xavier, Joilson;
    • Fonseca, Vagner;
    • Tomé, Luiz Marcelo R.;
    • Pereira, Maira Alves;
    • Machado, Vanessa Ferreira;
    • Alcantara, Luiz Carlos Junior;
    • Iani, Felipe C. de Melo;
    • Giovanetti, Marta
    Publication type:
    Article
    47

    West Nile Virus in Brazil.

    Published in:
    Pathogens, 2021, v. 10, n. 7, p. 896, doi. 10.3390/pathogens10070896
    By:
    • Costa, Érica Azevedo;
    • Giovanetti, Marta;
    • Silva Catenacci, Lilian;
    • Fonseca, Vagner;
    • Aburjaile, Flávia Figueira;
    • Chalhoub, Flávia L. L.;
    • Xavier, Joilson;
    • Campos de Melo Iani, Felipe;
    • da Cunha e Silva Vieira, Marcelo Adriano;
    • Freitas Henriques, Danielle;
    • Medeiros, Daniele Barbosa de Almeida;
    • Guedes, Maria Isabel Maldonado Coelho;
    • Senra Álvares da Silva Santos, Beatriz;
    • Gonçalves Silva, Aila Solimar;
    • de Pino Albuquerque Maranhão, Renata;
    • da Costa Faria, Nieli Rodrigues;
    • Farinelli de Siqueira, Renata;
    • de Oliveira, Tulio;
    • Ribeiro Leite Jardim Cavalcante, Karina;
    • Oliveira de Moura, Noely Fabiana
    Publication type:
    Article
    48

    Co-Circulation of Two Independent Clades and Persistence of CHIKV-ECSA Genotype during Epidemic Waves in Rio de Janeiro, Southeast Brazil.

    Published in:
    Pathogens, 2020, v. 9, n. 12, p. 984, doi. 10.3390/pathogens9120984
    By:
    • Fabri, Allison Araújo;
    • Rodrigues, Cintia Damasceno dos Santos;
    • Santos, Carolina Cardoso dos;
    • Chalhoub, Flávia Löwen Levy;
    • Sampaio, Simone Alves;
    • Faria, Nieli Rodrigues da Costa;
    • Torres, Maria Celeste;
    • Fonseca, Vagner;
    • Brasil, Patricia;
    • Calvet, Guilherme;
    • Alcantara, Luiz Carlos Junior;
    • Filippis, Ana Maria Bispo de;
    • Giovanetti, Marta;
    • de Bruycker-Nogueira, Fernanda
    Publication type:
    Article
    49

    Fatal Oropouche Virus Infections in Nonendemic Region, Brazil, 2024.

    Published in:
    Emerging Infectious Diseases, 2024, v. 30, n. 11, p. 2370, doi. 10.3201/eid3011.241132
    By:
    • Carlos Bandeira, Antonio;
    • Mota Pereira, Felicidade;
    • Leal, Arabela;
    • P. O. Santos, Sara;
    • Claudia Barbosa, Ana;
    • Leal Souza, Marcia Sao Pedro;
    • Ribeiro de Souza, Daniele;
    • Guimaraes, Natalia;
    • Fonseca, Vagner;
    • Giovanetti, Marta;
    • Junior Alcantara, Luiz Carlos;
    • A. Lessa, André Alvarez;
    • Costa Saavedra, Ramon;
    • R. Tomé, Luiz Marcelo;
    • M. Iani, Felipe Campos;
    • Mary Barros, Rivia;
    • O. Purificação, Sandra Maria;
    • Prado de Jesus, Jaciara;
    • Rosário Fonseca, Ricardo;
    • Valença Araújo, Marcio Luis
    Publication type:
    Article
    50

    Evidence of Zika Virus Reinfection by Genome Diversity and Antibody Response Analysis, Brazil.

    Published in:
    Emerging Infectious Diseases, 2024, v. 30, n. 2, p. 310, doi. 10.3201/eid3002.230122
    By:
    • da Costa Castilho, Marcia;
    • Bispo de Filippis, Ana Maria;
    • Ceschini Machado, Lais;
    • Vasconcelos de Lima Calvanti, Thaise Yasmine;
    • Costa Lima, Morganna;
    • Fonseca, Vagner;
    • Giovanetti, Marta;
    • Docena, Cassia;
    • Menezes Neto, Armando;
    • Aguiar Bôtto-Menezes, Camila Helena;
    • Oliveira Kara, Edna;
    • de La Barrera, Rafael;
    • Modjarrad, Kayvon;
    • Pereira Giozza, Silvana;
    • Fernando Pereira, Gerson;
    • Junior Alcantara, Luiz Carlos;
    • Nicole Broutet, Nathalie Jeanne;
    • Amaral Calvet, Guilherme;
    • Luz Wallau, Gabriel;
    • Oliveira Franca, Rafael Freitas
    Publication type:
    Article