Works matching AU Flint, Harry J.

Results: 66

The gut microbiota, bacterial metabolites and colorectal cancer.

Published in:

Nature Reviews Microbiology, 2014, v. 12, n. 10, p. 661, doi. 10.1038/nrmicro3344

By:

Louis, Petra;
Hold, Georgina L.;
Flint, Harry J.

Publication type:

Article

The impact of nutrition on the human microbiome.

Published in:

Nutrition Reviews, 2012, v. 70, n. S1, p. S10, doi. 10.1111/j.1753-4887.2012.00499.x

By:

Flint, Harry J

Publication type:

Article

Microbiota of De-Novo Pediatric IBD: Increased Faecalibacterium Prausnitzii and Reduced Bacterial Diversity in Crohn's But Not in Ulcerative Colitis.

Published in:

American Journal of Gastroenterology (Springer Nature), 2012, v. 107, n. 12, p. 1913, doi. 10.1038/ajg.2012.335

By:

Hansen, Richard;
Russell, Richard K;
Reiff, Caroline;
Louis, Petra;
McIntosh, Freda;
Berry, Susan H;
Mukhopadhya, Indrani;
Bisset, W Michael;
Barclay, Andy R;
Bishop, Jon;
Flynn, Diana M;
McGrogan, Paraic;
Loganathan, Sabarinathan;
Mahdi, Gamal;
Flint, Harry J;
El-Omar, Emad M;
Hold, Georgina L

Publication type:

Article

Modulation of the human gut microbiota by dietary fibres occurs at the species level.

Published in:

BMC Biology, 2016, v. 14, p. 1, doi. 10.1186/s12915-015-0224-3

By:

Chung, Wing Sun Faith;
Walker, Alan W.;
Louis, Petra;
Parkhill, Julian;
Vermeiren, Joan;
Bosscher, Douwina;
Duncan, Sylvia H.;
Flint, Harry J.

Publication type:

Article

Polysaccharide utilization by gut bacteria: potential for new insights from genomic analysis.

Published in:

Nature Reviews Microbiology, 2008, v. 6, n. 2, p. 121, doi. 10.1038/nrmicro1817

By:

Flint, Harry J.;
Bayer, Edward A.;
Rincon, Marco T.;
Lamed, Raphael;
White, Bryan A.

Publication type:

Article

From cellulosomes to cellulosomics.

Published in:

Chemical Record, 2008, v. 8, n. 6, p. 364, doi. 10.1002/tcr.20160

By:

Bayer, Edward A.;
Lamed, Raphael;
White, Bryan A.;
Flint, Harry J.

Publication type:

Article

Evidence for recent intergeneric transfer of a new tetracycline resistance gene, tet (W), isolated from Butyrivibrio fibrisolvens , and the occurrence of tet (O) in ruminal bacteria.

Published in:

Environmental Microbiology, 1999, v. 1, n. 1, p. 53, doi. 10.1046/j.1462-2920.1999.00004.x

By:

Barbosa, Teresa M.;
Scott, Karen P.;
Flint, Harry J.

Publication type:

Article

Type IV pili are widespread among non‐pathogenic Gram‐positive gut bacteria with diverse carbohydrate utilization patterns.

Published in:

Environmental Microbiology, 2021, v. 23, n. 3, p. 1527, doi. 10.1111/1462-2920.15362

By:

Rozman, Vita;
Accetto, Tomaž;
Duncan, Sylvia H.;
Flint, Harry J.;
Vodovnik, Maša

Publication type:

Article

β‐Glucan is a major growth substrate for human gut bacteria related to Coprococcus eutactus.

Published in:

Environmental Microbiology, 2020, v. 22, n. 6, p. 2150, doi. 10.1111/1462-2920.14977

By:

Alessi, Anna M.;
Gray, Victoria;
Farquharson, Freda M.;
Flores‐López, Adriana;
Shaw, Sophie;
Stead, David;
Wegmann, Udo;
Shearman, Claire;
Gasson, Mike;
Collie‐Duguid, Elaina S. R.;
Flint, Harry J.;
Louis, Petra

Publication type:

Article

Formate cross‐feeding and cooperative metabolic interactions revealed by transcriptomics in co‐cultures of acetogenic and amylolytic human colonic bacteria.

Published in:

Environmental Microbiology, 2019, v. 21, n. 1, p. 259, doi. 10.1111/1462-2920.14454

By:

Laverde Gomez, Jenny A.;
Mukhopadhya, Indrani;
Duncan, Sylvia H.;
Louis, Petra;
Shaw, Sophie;
Collie‐Duguid, Elaina;
Crost, Emmanuelle;
Juge, Nathalie;
Flint, Harry J.

Publication type:

Article

Sporulation capability and amylosome conservation among diverse human colonic and rumen isolates of the keystone starch‐degrader <italic>Ruminococcus bromii</italic>.

Published in:

Environmental Microbiology, 2018, v. 20, n. 1, p. 324, doi. 10.1111/1462-2920.14000

By:

Mukhopadhya, Indrani;
Moraïs, Sarah;
Laverde‐gomez, Jenny;
Sheridan, Paul O.;
Walker, Alan W.;
Kelly, William;
Klieve, Athol V.;
Ouwerkerk, Diane;
Duncan, Sylvia H.;
Louis, Petra;
Koropatkin, Nicole;
Cockburn, Darrell;
Kibler, Ryan;
Cooper, Philip J.;
Sandoval, Carlos;
Crost, Emmanuelle;
Juge, Nathalie;
Bayer, Edward A.;
Flint, Harry J.

Publication type:

Article

Formation of propionate and butyrate by the human colonic microbiota.

Published in:

Environmental Microbiology, 2017, v. 19, n. 1, p. 29, doi. 10.1111/1462-2920.13589

By:

Louis, Petra;
Flint, Harry J.

Publication type:

Article

Lysozyme activity of the R uminococcus champanellensis cellulosome.

Published in:

Environmental Microbiology, 2016, v. 18, n. 12, p. 5112, doi. 10.1111/1462-2920.13501

By:

Moraïs, Sarah;
Cockburn, Darrell W.;
Ben ‐ David, Yonit;
Koropatkin, Nicole M.;
Martens, Eric C.;
Duncan, Sylvia H.;
Flint, Harry J.;
Mizrahi, Itzhak;
Bayer, Edward A.

Publication type:

Article

Wheat bran promotes enrichment within the human colonic microbiota of butyrate-producing bacteria that release ferulic acid.

Published in:

Environmental Microbiology, 2016, v. 18, n. 7, p. 2214, doi. 10.1111/1462-2920.13158

By:

Duncan, Sylvia H.;
Russell, Wendy R.;
Quartieri, Andrea;
Rossi, Maddalena;
Parkhill, Julian;
Walker, Alan W.;
Flint, Harry J.

Publication type:

Article

Enzymatic profiling of cellulosomal enzymes from the human gut bacterium, R uminococcus champanellensis, reveals a fine-tuned system for cohesin-dockerin recognition.

Published in:

Environmental Microbiology, 2016, v. 18, n. 2, p. 542, doi. 10.1111/1462-2920.13047

By:

Moraïs, Sarah;
David, Yonit Ben;
Bensoussan, Lizi;
Duncan, Sylvia H.;
Koropatkin, Nicole M.;
Martens, Eric C.;
Flint, Harry J.;
Bayer, Edward A.

Publication type:

Article

Ruminococcal cellulosome systems from rumen to human.

Published in:

Environmental Microbiology, 2015, v. 17, n. 9, p. 3407, doi. 10.1111/1462-2920.12868

By:

Ben David, Yonit;
Dassa, Bareket;
Borovok, Ilya;
Lamed, Raphael;
Koropatkin, Nicole M.;
Martens, Eric C.;
White, Bryan A.;
Bernalier ‐ Donadille, Annick;
Duncan, Sylvia H.;
Flint, Harry J.;
Bayer, Edward A.;
Moraïs, Sarah

Publication type:

Article

Modelling the emergent dynamics and major metabolites of the human colonic microbiota.

Published in:

Environmental Microbiology, 2015, v. 17, n. 5, p. 1615, doi. 10.1111/1462-2920.12599

By:

Kettle, Helen;
Louis, Petra;
Holtrop, Grietje;
Duncan, Sylvia H.;
Flint, Harry J.

Publication type:

Article

Complete genome of a new Firmicutes species belonging to the dominant human colonic microbiota (' Ruminococcus bicirculans') reveals two chromosomes and a selective capacity to utilize plant glucans.

Published in:

Environmental Microbiology, 2014, v. 16, n. 9, p. 2879, doi. 10.1111/1462-2920.12217

By:

Wegmann, Udo;
Louis, Petra;
Goesmann, Alexander;
Henrissat, Bernard;
Duncan, Sylvia H.;
Flint, Harry J.

Publication type:

Article

Phylogenetic distribution of genes encoding β-glucuronidase activity in human colonic bacteria and the impact of diet on faecal glycosidase activities.

Published in:

Environmental Microbiology, 2012, v. 14, n. 8, p. 1876, doi. 10.1111/j.1462-2920.2012.02711.x

By:

McIntosh, Freda M.;
Maison, Nathalie;
Holtrop, Grietje;
Young, Pauline;
Stevens, Valerie J.;
Ince, Jennifer;
Johnstone, Alexandra M.;
Lobley, Gerald E.;
Flint, Harry J.;
Louis, Petra

Publication type:

Article

Phage-bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome.

Published in:

Environmental Microbiology, 2012, v. 14, n. 1, p. 207, doi. 10.1111/j.1462-2920.2011.02593.x

By:

Berg Miller, Margret E.;
Yeoman, Carl J.;
Chia, Nicholas;
Tringe, Susannah G.;
Angly, Florent E.;
Edwards, Robert A.;
Flint, Harry J.;
Lamed, Raphael;
Bayer, Edward A.;
White, Bryan A.

Publication type:

Article

Diversity of human colonic butyrate-producing bacteria revealed by analysis of the butyryl-CoA:acetate CoA-transferase gene.

Published in:

Environmental Microbiology, 2010, v. 12, n. 2, p. 304, doi. 10.1111/j.1462-2920.2009.02066.x

By:

Louis, Petra;
Young, Pauline;
Holtrop, Grietje;
Flint, Harry J.

Publication type:

Article

The role of pH in determining the species composition of the human colonic microbiota.

Published in:

Environmental Microbiology, 2009, v. 11, n. 8, p. 2112, doi. 10.1111/j.1462-2920.2009.01931.x

By:

Duncan, Sylvia H.;
Louis, Petra;
Thomson, John M.;
Flint, Harry J.

Publication type:

Article

The species composition of the human intestinal microbiota differs between particle-associated and liquid phase communities.

Published in:

Environmental Microbiology, 2008, v. 10, n. 12, p. 3275, doi. 10.1111/j.1462-2920.2008.01717.x

By:

Walker, Alan W.;
Duncan, Sylvia H.;
Harmsen, Hermie J. M.;
Holtrop, Grietje;
Welling, Gjalt W.;
Flint, Harry J.

Publication type:

Article

Interactions and competition within the microbial community of the human colon: links between diet and health.

Published in:

Environmental Microbiology, 2007, v. 9, n. 5, p. 1101, doi. 10.1111/j.1462-2920.2007.01281.x

By:

Flint, Harry J.;
Duncan, Sylvia H.;
Scott, Karen P.;
Louis, Petra

Publication type:

Article

Selective colonization of insoluble substrates by human faecal bacteria.

Published in:

Environmental Microbiology, 2007, v. 9, n. 3, p. 667, doi. 10.1111/j.1462-2920.2006.01186.x

By:

Leitch, E. Carol McWilliam;
Walker, Alan W.;
Duncan, Sylvia H.;
Holtrop, Grietje;
Flint, Harry J.

Publication type:

Article

How our gut microbes influence our behaviour.

Published in:

Journal of Neuroendocrinology, 2013, v. 25, n. 5, p. 517, doi. 10.1111/jne.12027

By:

Louis, Petra;
Flint, Harry J

Publication type:

Article

Gut microbial metabolites in health and disease.

Published in:

2016

By:

Flint, Harry J.

Publication type:

Editorial

Some are more equal than others.

Published in:

Gut Microbes, 2013, v. 4, n. 3, p. 236, doi. 10.4161/gmic.23998

By:

Xiaolei Ze;
Le Mougen, Fanny;
Duncan, Sylvia H.;
Louis, Petra;
Flint, Harry J.

Publication type:

Article

Microbial degradation of complex carbohydrates in the gut.

Published in:

Gut Microbes, 2012, v. 3, n. 4, p. 1, doi. 10.4161/gmic.19897

By:

Flint, Harry J.;
Scott, Karen P.;
Duncan, Sylvia H.;
Louis, Petra;
Forano, Evelyne

Publication type:

Article

microPop: Modelling microbial populations and communities in R.

Published in:

Methods in Ecology & Evolution, 2018, v. 9, n. 2, p. 399, doi. 10.1111/2041-210X.12873

By:

Kettle, Helen;
Holtrop, Grietje;
Louis, Petra;
Flint, Harry J.;
Golding, Nick

Publication type:

Article

Specific substrate-driven changes in human faecal microbiota composition contrast with functional redundancy in short-chain fatty acid production.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2018, v. 12, n. 2, p. 610, doi. 10.1038/ismej.2017.196

By:

Reichardt, Nicole;
Vollmer, Maren;
Holtrop, Grietje;
Farquharson, Freda M;
Wefers, Daniel;
Bunzel, Mirko;
Duncan, Sylvia H;
Drew, Janice E;
Williams, Lynda M;
Milligan, Graeme;
Preston, Thomas;
Morrison, Douglas;
Flint, Harry J;
Louis, Petra

Publication type:

Article

Challenges in microbial ecology: building predictive understanding of community function and dynamics.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2016, v. 10, n. 11, p. 2557, doi. 10.1038/ismej.2016.45

By:

Widder, Stefanie;
Allen, Rosalind J;
Pfeiffer, Thomas;
Curtis, Thomas P;
Wiuf, Carsten;
Sloan, William T;
Cordero, Otto X;
Brown, Sam P;
Momeni, Babak;
Shou, Wenying;
Kettle, Helen;
Flint, Harry J;
Haas, Andreas F;
Laroche, Béatrice;
Kreft, Jan-Ulrich;
Rainey, Paul B;
Freilich, Shiri;
Schuster, Stefan;
Milferstedt, Kim;
van der Meer, Jan R

Publication type:

Article

Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 11, p. 2218, doi. 10.1038/ismej.2014.63

By:

Salonen, Anne;
Lahti, Leo;
Salojärvi, Jarkko;
Holtrop, Grietje;
Korpela, Katri;
Duncan, Sylvia H;
Date, Priya;
Farquharson, Freda;
Johnstone, Alexandra M;
Lobley, Gerald E;
Louis, Petra;
Flint, Harry J;
de Vos, Willem M

Publication type:

Article

Phylogenetic distribution of three pathways for propionate production within the human gut microbiota.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 6, p. 1323, doi. 10.1038/ismej.2014.14

By:

Reichardt, Nicole;
Duncan, Sylvia H;
Young, Pauline;
Belenguer, Alvaro;
McWilliam Leitch, Carol;
Scott, Karen P;
Flint, Harry J;
Louis, Petra

Publication type:

Article

Phylogenetic distribution of three pathways for propionate production within the human gut microbiota.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 6, p. 1352, doi. 10.1038/ismej.2014.48

By:

Reichardt, Nicole;
Duncan, Sylvia H;
Young, Pauline;
Belenguer, Alvaro;
McWilliam Leitch, Carol;
Scott, Karen P;
Flint, Harry J;
Louis, Petra

Publication type:

Article

Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colon.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 8, p. 1535, doi. 10.1038/ismej.2012.4

By:

Ze, Xiaolei;
Duncan, Sylvia H;
Louis, Petra;
Flint, Harry J

Publication type:

Article

The gut anaerobe Faecalibacterium prausnitzii uses an extracellular electron shuttle to grow at oxic-anoxic interphases.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 8, p. 1578, doi. 10.1038/ismej.2012.5

By:

Khan, M Tanweer;
Duncan, Sylvia H;
Stams, Alfons J M;
van Dijl, Jan Maarten;
Flint, Harry J;
Harmsen, Hermie J M

Publication type:

Article

Dominant and diet-responsive groups of bacteria within the human colonic microbiota.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 2, p. 220, doi. 10.1038/ismej.2010.118

By:

Walker, Alan W;
Ince, Jennifer;
Duncan, Sylvia H;
Webster, Lucy M;
Holtrop, Grietje;
Ze, Xiaolei;
Brown, David;
Stares, Mark D;
Scott, Paul;
Bergerat, Aurore;
Louis, Petra;
McIntosh, Freda;
Johnstone, Alexandra M;
Lobley, Gerald E;
Parkhill, Julian;
Flint, Harry J

Publication type:

Article

Major phenylpropanoid-derived metabolites in the human gut can arise from microbial fermentation of protein.

Published in:

Molecular Nutrition & Food Research, 2013, v. 57, n. 3, p. 523, doi. 10.1002/mnfr.201200594

By:

Russell, Wendy R.;
Duncan, Sylvia H.;
Scobbie, Lorraine;
Duncan, Gary;
Cantlay, Louise;
Calder, A. Graham;
Anderson, Susan E.;
Flint, Harry J.

Publication type:

Article

Cohesin diversity revealed by the crystal structure of the anchoring cohesin from Ruminococcus flavefaciens.

Published in:

Proteins, 2009, v. 77, n. 3, p. 699, doi. 10.1002/prot.22483

By:

Alber, Orly;
Noach, Ilit;
Rincon, Marco T.;
Flint, Harry J.;
Shimon, Linda J. W.;
Lamed, Raphael;
Frolow, Felix;
Bayer, Edward A.

Publication type:

Article

Links between diet, gut microbiota composition and gut metabolism.

Published in:

Proceedings of the Nutrition Society, 2015, v. 74, n. 1, p. 13, doi. 10.1017/S0029665114001463

By:

Flint, Harry J.;
Duncan, Sylvia H.;
Scott, Karen P.;
Louis, Petra

Publication type:

Article

The gut microbial metabolome: modulation of cancer risk in obese individuals.

Published in:

Proceedings of the Nutrition Society, 2013, v. 72, n. 1, p. 178, doi. 10.1017/S0029665112002881

By:

Russell, Wendy R.;
Duncan, Sylvia H.;
Flint, Harry J.

Publication type:

Article

Functional genomics reveals that Clostridium difficile Spo0A coordinates sporulation, virulence and metabolism.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-160

By:

Pettit, Laura J.;
Browne, Hilary P.;
Lu Yu;
Smits, Wiep Klaas;
Fagan, Robert P.;
Barquist, Lars;
Martin, Melissa J.;
Goulding, David;
Duncan, Sylvia H.;
Flint, Harry J.;
Dougan, Gordon;
Choudhary, Jyoti S.;
Lawley, Trevor D.

Publication type:

Article

Targeted Restoration of the Intestinal Microbiota with a Simple, Defined Bacteriotherapy Resolves Relapsing Clostridium difficile Disease in Mice.

Published in:

PLoS Pathogens, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.ppat.1002995

By:

Lawley, Trevor D.;
Clare, Simon;
Walker, Alan W.;
Stares, Mark D.;
Connor, Thomas R.;
Raisen, Claire;
Goulding, David;
Rad, Roland;
Schreiber, Fernanda;
Brandt, Cordelia;
Deakin, Laura J.;
Pickard, Derek J.;
Duncan, Sylvia H.;
Flint, Harry J.;
Clark, Taane G.;
Parkhill, Julian;
Dougan, Gordon

Publication type:

Article

Why does increased microbial fermentation in the human colon shift toward butyrate?

Published in:

AIMS Microbiology, 2024, v. 10, n. 2, p. 1, doi. 10.3934/microbiol.2024016

By:

Flint, Harry J.;
Louis, Petra;
Duncan, Sylvia H.

Publication type:

Article

Higher total faecal short-chain fatty acid concentrations correlate with increasing proportions of butyrate and decreasing proportions of branched-chain fatty acids across multiple human studies.

Published in:

Gut Microbiome, 2022, v. 3, p. 1, doi. 10.1017/gmb.2022.1

By:

LaBouyer, Maria;
Holtrop, Grietje;
Horgan, Graham;
Gratz, Silvia W.;
Belenguer, Alvaro;
Smith, Nicola;
Walker, Alan W.;
Duncan, Sylvia H.;
Johnstone, Alexandra M.;
Louis, Petra;
Flint, Harry J.;
Scott, Karen P.

Publication type:

Article

Dietary fibers inhibit obesity in mice, but host responses in the cecum and liver appear unrelated to fiber-specific changes in cecal bacterial taxonomic composition.

Published in:

Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-34081-8

By:

Drew, Janice E.;
Reichardt, Nicole;
Williams, Lynda M.;
Mayer, Claus-Dieter;
Walker, Alan W.;
Farquharson, Andrew J.;
Kastora, Stavroula;
Farquharson, Freda;
Milligan, Graeme;
Morrison, Douglas J.;
Preston, Tom;
Flint, Harry J.;
Louis, Petra

Publication type:

Article

Plant Cell Wall Breakdown by Anaerobic Microorganisms from the Mammalian Digestive Tract.

Published in:

Annals of the New York Academy of Sciences, 2008, v. 1125, p. 280, doi. 10.1196/annals.1419.022

By:

Flint, Harry J.;
Bayer, Edward A.

Publication type:

Article

Expression of a cellulase gene, celA, from the rumen fungus Neocallimastix patriciarum in Streptococcus bovis by means of promoter fusions.

Published in:

Biotechnology Letters, 2002, v. 24, n. 9, p. 735, doi. 10.1023/A:1015250504093

By:

Ekinci, Mehmet Sait;
Martin, Jennifer C.;
Flint, Harry J.

Publication type:

Article

Streptococcus bovis as a host for the expression of cloned polysaccharidase genes.

Published in:

Biotechnology Letters, 2001, v. 23, n. 7, p. 501, doi. 10.1023/A:1010384828899

By:

Ekinci, M. Sait;
Martin, Jennifer C.;
Flint, Harry J.

Publication type:

Article