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Disruption of redox homeostasis for combinatorial drug efficacy in K-Ras tumors as revealed by metabolic connectivity profiling.
- Published in:
- Cancer & Metabolism, 2020, v. 8, n. 1, p. N.PAG, doi. 10.1186/s40170-020-00227-4
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- Article
Identification of Potential Repurposable Drugs in Alzheimer's Disease Exploiting a Bioinformatics Analysis.
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- Journal of Personalized Medicine, 2022, v. 12, n. 10, p. 1731, doi. 10.3390/jpm12101731
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- Article
A Transcriptome- and Interactome-Based Analysis Identifies Repurposable Drugs for Human Breast Cancer Subtypes.
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- Symmetry (20738994), 2022, v. 14, n. 11, p. 2230, doi. 10.3390/sym14112230
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- Article
Repurposing Histaminergic Drugs in Multiple Sclerosis.
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- International Journal of Molecular Sciences, 2022, v. 23, n. 11, p. 6347, doi. 10.3390/ijms23116347
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- Article
A Comparison of Network-Based Methods for Drug Repurposing along with an Application to Human Complex Diseases.
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- International Journal of Molecular Sciences, 2022, v. 23, n. 7, p. 3703, doi. 10.3390/ijms23073703
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- Article
The New Paradigm of Network Medicine to Analyze Breast Cancer Phenotypes.
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- International Journal of Molecular Sciences, 2020, v. 21, n. 18, p. 6690, doi. 10.3390/ijms21186690
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- Article
TCGA2BED: extracting, extending, integrating, and querying The Cancer Genome Atlas.
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- BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-016-1419-5
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- Publication type:
- Article
MISSEL: a method to identify a large number of small species-specific genomic subsequences and its application to viruses classification.
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- BioData Mining, 2016, v. 9, p. 1, doi. 10.1186/s13040-016-0116-2
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- Article
Supervised DNA barcodes species classification: analysis, comparisons and results.
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- BioData Mining, 2014, v. 7, n. 1, p. 1, doi. 10.1186/1756-0381-7-4
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- Publication type:
- Article
Circular RNA mediated gene regulation in human breast cancer: A bioinformatics analysis.
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- PLoS ONE, 2023, v. 18, n. 9, p. 1, doi. 10.1371/journal.pone.0289051
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- Publication type:
- Article
SWIMmeR: an R-based software to unveiling crucial nodes in complex biological networks.
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- Bioinformatics, 2022, v. 38, n. 2, p. 586, doi. 10.1093/bioinformatics/btab657
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- Article
SWIM: a computational tool to unveiling crucial nodes in complex biological networks.
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- Scientific Reports, 2017, p. 44797, doi. 10.1038/srep44797
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- Article
Immune-related toxicity and soluble profile in patients affected by solid tumors: a network approach.
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- Cancer Immunology, Immunotherapy, 2023, v. 72, n. 7, p. 2217, doi. 10.1007/s00262-023-03384-9
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- Publication type:
- Article
The Impact of Drug–Drug Interactions on the Toxicity Profile of Combined Treatment with BRAF and MEK Inhibitors in Patients with BRAF-Mutated Metastatic Melanoma.
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- Cancers, 2023, v. 15, n. 18, p. 4587, doi. 10.3390/cancers15184587
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- Publication type:
- Article
A Network of MicroRNAs and mRNAs Involved in Melanosome Maturation and Trafficking Defines the Lower Response of Pigmentable Melanoma Cells to Targeted Therapy.
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- Cancers, 2023, v. 15, n. 3, p. 894, doi. 10.3390/cancers15030894
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- Publication type:
- Article
Transcriptomics and Metabolomics Integration Reveals Redox-Dependent Metabolic Rewiring in Breast Cancer Cells.
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- Cancers, 2021, v. 13, n. 20, p. 5058, doi. 10.3390/cancers13205058
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- Article
Gene network analysis using SWIM reveals interplay between the transcription factor‐encoding genes HMGA1, FOXM1, and MYBL2 in triple‐negative breast cancer.
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- FEBS Letters, 2021, v. 595, n. 11, p. 1569, doi. 10.1002/1873-3468.14085
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- Article
Integrated transcriptomic correlation network analysis identifies COPD molecular determinants.
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- Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-60228-7
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- Publication type:
- Article
A network approach to define the predictive role of immune profile on tumor response and toxicity of anti PD-1 single agent immunotherapy in patients with solid tumors.
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- Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1199089
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- Article
Next generation sequencing reads comparison with an alignment-free distance.
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- BMC Research Notes, 2014, v. 7, n. 1, p. 1, doi. 10.1186/1756-0500-7-869
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- Publication type:
- Article
MIENTURNET: an interactive web tool for microRNA-target enrichment and network-based analysis.
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- BMC Bioinformatics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12859-019-3105-x
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- Publication type:
- Article
An ontology-based approach for modelling and querying Alzheimer's disease data.
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- BMC Medical Informatics & Decision Making, 2023, v. 23, n. 1, p. 1, doi. 10.1186/s12911-023-02211-6
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- Publication type:
- Article
SAveRUNNER: A network-based algorithm for drug repurposing and its application to COVID-19.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008686
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- Article
The role of FOSL1 in stem-like cell reprogramming processes.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-94072-0
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- Publication type:
- Article
Role of the long non-coding RNA PVT1 in the dysregulation of the ceRNA-ceRNA network in human breast cancer.
- Published in:
- PLoS ONE, 2017, v. 12, n. 2, p. 1, doi. 10.1371/journal.pone.0171661
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- Publication type:
- Article
BRAF<sup>V600E</sup>-mutant cancers display a variety of networks by SWIM analysis: prediction of vemurafenib clinical response.
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- Endocrine (1355008X), 2019, v. 64, n. 2, p. 406, doi. 10.1007/s12020-019-01890-4
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- Article
Genomic and Immune Approach in Platinum Refractory HPV-Negative Head and Neck Squamous Cell Carcinoma Patients Treated with Immunotherapy: A Novel Combined Profile.
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- Biomedicines, 2022, v. 10, n. 11, p. 2732, doi. 10.3390/biomedicines10112732
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- Publication type:
- Article
SWIM tool application to expression data of glioblastoma stem-like cell lines, corresponding primary tumors and conventional glioma cell lines.
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- BMC Bioinformatics, 2018, v. 19, n. 15, p. 103, doi. 10.1186/s12859-018-2421-x
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- Publication type:
- Article
Network-Based Approaches to Explore Complex Biological Systems towards Network Medicine.
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- Genes, 2018, v. 9, n. 9, p. 437, doi. 10.3390/genes9090437
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- Article
Hepatitis B Virus and microRNAs: A Bioinformatics Approach.
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- International Journal of Molecular Sciences, 2023, v. 24, n. 24, p. 17224, doi. 10.3390/ijms242417224
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- Article
Combining EEG signal processing with supervised methods for Alzheimer's patients classification.
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- 2018
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- Publication type:
- journal article
SPINNAKER: an R-based tool to highlight key RNA interactions in complex biological networks.
- Published in:
- BMC Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12859-022-04695-x
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- Publication type:
- Article
CAMUR: Knowledge extraction from RNA-seq cancer data through equivalent classification rules.
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- Bioinformatics, 2016, v. 32, n. 5, p. 697, doi. 10.1093/bioinformatics/btv635
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- Article
Comprehensive network medicine-based drug repositioning via integration of therapeutic efficacy and side effects.
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- NPJ Systems Biology & Applications, 2022, v. 8, n. 1, p. 1, doi. 10.1038/s41540-022-00221-0
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- Article
Prostate cancer screening research can benefit from network medicine: an emerging awareness.
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- NPJ Systems Biology & Applications, 2020, v. 6, n. 1, p. 1, doi. 10.1038/s41540-020-0133-0
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- Article
Gene co-expression in the interactome: moving from correlation toward causation via an integrated approach to disease module discovery.
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- NPJ Systems Biology & Applications, 2021, v. 7, n. 1, p. 1, doi. 10.1038/s41540-020-00168-0
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- Publication type:
- Article
SAveRUNNER: an R-based tool for drug repurposing.
- Published in:
- BMC Bioinformatics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12859-021-04076-w
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- Publication type:
- Article