Works matching AU Finn, Robert D.

Results: 91

DASMI: exchanging, annotating and assessing molecular interaction data.

Published in:

Bioinformatics, 2009, v. 25, n. 10, p. 1321, doi. 10.1093/bioinformatics/btp142

By:

Hagen Blankenburg;
Robert D. Finn;
Andreas Prlic;
Andrew M. Jenkinson;
Fidel Ramírez;
Dorothea Emig;
Sven-Eric Schelhorn;
Joachim Büch;
Thomas Lengauer;
Mario Albrecht

Publication type:

Article

Phospholipid scramblases and Tubby-like proteins belong to a new superfamily of membrane tethered transcription factors.

Published in:

Bioinformatics, 2009, v. 25, n. 2, p. 159, doi. 10.1093/bioinformatics/btn595

By:

Alex Bateman;
Robert D. Finn;
Peter J. Sims;
Therese Wiedmer;
Andreas Biegert;
Johannes SÃ¶ding

Publication type:

Article

ProServer: a simple, extensible Perl DAS server.

Published in:

Bioinformatics, 2007, v. 23, n. 12, p. 1568, doi. 10.1093/bioinformatics/btl650

By:

Robert D. Finn;
James W. Stalker;
David K. Jackson;
Eugene Kulesha;
Jody Clements;
Roger Pettett

Publication type:

Article

Going Molecular: Sequence-based spatiotemporal biodiversity evidence in GBIF.

Published in:

2019

By:

Schigel, Dmitry S.;
Jeppesen, Thomas S.;
Finn, Robert D.;
Cochrane, Guy;
Kõljalg, Urmas;
Quast, Christian;
Lanfear, Jerry;
Orrell, Thomas M.;
Hobern, Donald;
Miller, Joseph T.

Publication type:

Abstract

Toxicity of Macroalgae Extracts to Larvae of the Northern House Mosquito.

Published in:

Life (2075-1729), 2024, v. 14, n. 12, p. 1527, doi. 10.3390/life14121527

By:

Rashed, Ahmed A.;
Heikal, Yasmin M.;
Finn, Robert D.;
Bayoumy, Mohamed H.;
El-Harairy, Amged;
Refaay, Dina A.

Publication type:

Article

Estimating the quality of eukaryotic genomes recovered from metagenomic analysis with EukCC.

Published in:

Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02155-4

By:

Saary, Paul;
Mitchell, Alex L.;
Finn, Robert D.

Publication type:

Article

Clustered Coding Variants in the Glutamate Receptor Complexes of Individuals with Schizophrenia and Bipolar Disorder.

Published in:

PLoS ONE, 2011, v. 6, n. 4, p. 1, doi. 10.1371/journal.pone.0019011

By:

Frank, René A. W.;
McRae, Allan F.;
Pocklington, Andrew J.;
van de Lagemaat, Louie N.;
Navarro, Pau;
Croning, Mike D. R.;
Komiyama, Noboru H.;
Bradley, Sophie J.;
Challiss, R. A. John;
Armstrong, J. Douglas;
Finn, Robert D.;
Malloy, Mary P.;
MacLean, Alan W.;
Harris, Sarah E.;
Starr, John M.;
Bhaskar, Sanjeev S.;
Howard, Eleanor K.;
Hunt, Sarah E.;
Coffey, Alison J.;
Ranganath, Venkatesh

Publication type:

Article

Representative Proteomes: A Stable, Scalable and Unbiased Proteome Set for Sequence Analysis and Functional Annotation.

Published in:

PLoS ONE, 2011, v. 6, n. 4, p. 1, doi. 10.1371/journal.pone.0018910

By:

Chuming Chen;
Natale, Darren A.;
Finn, Robert D.;
Hongzhan Huang;
Jian Zhang;
Wu, Cathy H.;
Mazumder, Raja

Publication type:

Article

Phylogenomics of expanding uncultured environmental Tenericutes provides insights into their pathogenicity and evolutionary relationship with Bacilli.

Published in:

BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-06807-4

By:

Wang, Yong;
Huang, Jiao-Mei;
Zhou, Ying-Li;
Almeida, Alexandre;
Finn, Robert D.;
Danchin, Antoine;
He, Li-Sheng

Publication type:

Article

Eleven quick tips to build a usable REST API for life sciences.

Published in:

PLoS Computational Biology, 2018, v. 14, n. 12, p. 1, doi. 10.1371/journal.pcbi.1006542

By:

Tarkowska, Aleksandra;
Cook, Charles E.;
Turner, Edd;
Finn, Robert D.;
Yates, Andrew D.;
Carvalho-Silva, Denise

Publication type:

Article

COVID-19 pandemic reveals the peril of ignoring metadata standards.

Published in:

Scientific Data, 2020, v. 7, n. 1, p. 1, doi. 10.1038/s41597-020-0524-5

By:

Schriml, Lynn M.;
Chuvochina, Maria;
Davies, Neil;
Eloe-Fadrosh, Emiley A.;
Finn, Robert D.;
Hugenholtz, Philip;
Hunter, Christopher I.;
Hurwitz, Bonnie L.;
Kyrpides, Nikos C.;
Meyer, Folker;
Mizrachi, Ilene Karsch;
Sansone, Susanna-Assunta;
Sutton, Granger;
Tighe, Scott;
Walls, Ramona

Publication type:

Article

VIRify: An integrated detection, annotation and taxonomic classification pipeline using virus-specific protein profile hidden Markov models.

Published in:

PLoS Computational Biology, 2023, v. 19, n. 8, p. 1, doi. 10.1371/journal.pcbi.1011422

By:

Rangel-Pineros, Guillermo;
Almeida, Alexandre;
Beracochea, Martin;
Sakharova, Ekaterina;
Marz, Manja;
Reyes Muñoz, Alejandro;
Hölzer, Martin;
Finn, Robert D.

Publication type:

Article

Identifying accurate metagenome and amplicon software via a meta-analysis of sequence to taxonomy benchmarking studies.

Published in:

PeerJ, 2019, p. 1, doi. 10.7717/peerj.6160

By:

Gardner, Paul P.;
Watson, Renee J.;
Morgan, Xochitl C.;
Draper, Jenny L.;
Finn, Robert D.;
Morales, Sergio E.;
Stott, Matthew B.

Publication type:

Article

Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 2, p. 642, doi. 10.1093/bib/bbaa232

By:

Hufsky, Franziska;
Lamkiewicz, Kevin;
Almeida, Alexandre;
Aouacheria, Abdel;
Arighi, Cecilia;
Bateman, Alex;
Baumbach, Jan;
Beerenwinkel, Niko;
Brandt, Christian;
Cacciabue, Marco;
Chuguransky, Sara;
Drechsel, Oliver;
Finn, Robert D;
Fritz, Adrian;
Fuchs, Stephan;
Hattab, Georges;
Hauschild, Anne-Christin;
Heider, Dominik;
Hoffmann, Marie;
Hölzer, Martin

Publication type:

Article

The complexity, challenges and benefits of comparing two transporter classification systems in TCDB and Pfam.

Published in:

Briefings in Bioinformatics, 2015, v. 16, n. 5, p. 865, doi. 10.1093/bib/bbu053

By:

Chiang, Zachary;
Vastermark, Ake;
Punta, Marco;
Coggill, Penelope C.;
Mistry, Jaina;
Finn, Robert D.;
Saier Jr., Milton H.

Publication type:

Article

Experience using web services for biological sequence analysis.

Published in:

Briefings in Bioinformatics, 2008, v. 9, n. 6, p. 493, doi. 10.1093/bib/bbn029

By:

Stockinger, Heinz;
Attwood, Teresa;
Nadeem Chohan, Shahid;
Côté, Richard;
Cudré-Mauroux, Philippe;
Falquet, Laurent;
Fernandes, Pedro;
Finn, Robert D.;
Hupponen, Taavi;
Korpelainen, Eija;
Labarga, Alberto;
Laugraud, Aurelie;
Lima, Tania;
Pafilis, Evangelos;
Pagni, Marco;
Pettifer, Steve;
Phan, Isabelle;
Rahman, Nazim

Publication type:

Article

Pfam 10 years on: 10000 families and still growing.

Published in:

Briefings in Bioinformatics, 2008, v. 9, n. 3, p. 210, doi. 10.1093/bib/bbn010

By:

Sammut, Stephen John;
Finn, Robert D.;
Bateman, Alex

Publication type:

Article

An inter-laboratory study to investigate the impact of the bioinformatics component on microbiome analysis using mock communities.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-89881-2

By:

O'Sullivan, Denise M.;
Doyle, Ronan M.;
Temisak, Sasithon;
Redshaw, Nicholas;
Whale, Alexandra S.;
Logan, Grace;
Huang, Jiabin;
Fischer, Nicole;
Amos, Gregory C. A.;
Preston, Mark D.;
Marchesi, Julian R.;
Wagner, Josef;
Parkhill, Julian;
Motro, Yair;
Denise, Hubert;
Finn, Robert D.;
Harris, Kathryn A.;
Kay, Gemma L.;
O'Grady, Justin;
Ransom-Jones, Emma

Publication type:

Article

R2DT is a framework for predicting and visualising RNA secondary structure using templates.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-23555-5

By:

Sweeney, Blake A.;
Hoksza, David;
Nawrocki, Eric P.;
Ribas, Carlos Eduardo;
Madeira, Fábio;
Cannone, Jamie J.;
Gutell, Robin;
Maddala, Aparna;
Meade, Caeden D.;
Williams, Loren Dean;
Petrov, Anton S.;
Chan, Patricia P.;
Lowe, Todd M.;
Finn, Robert D.;
Petrov, Anton I.

Publication type:

Article

Metaproteomics characterization of the alphaproteobacteria microbiome in different developmental and feeding stages of the poultry red mite Dermanyssus gallinae (De Geer, 1778).

Published in:

Avian Pathology, 2019, v. 48, p. S52, doi. 10.1080/03079457.2019.1635679

By:

Lima-Barbero, José Francisco;
Díaz-Sanchez, Sandra;
Sparagano, Olivier;
Finn, Robert D.;
de la Fuente, José;
Villar, Margarita

Publication type:

Article

GO annotation in InterPro: why stability does not indicate accuracy in a sea of changing annotations.

Published in:

Database: The Journal of Biological Databases & Curation, 2016, v. 2016, p. 1, doi. 10.1093/database/baw027

By:

Sangrador-Vegas, Amaia;
Mitchell, Alex L.;
Hsin-Yu Chang;
Siew-Yit Yong;
Finn, Robert D.

Publication type:

Article

Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat.

Published in:

2015

By:

Babbitt, Patricia C.;
Bagos, Pantelis G.;
Bairoch, Amos;
Bateman, Alex;
Chatonnet, Arnaud;
Jinan Chen, Mark;
Craik, David J.;
Finn, Robert D.;
Gloriam, David;
Haft, Daniel H.;
Henrissat, Bernard;
Holliday, Gemma L.;
Isberg, Vignir;
Kaas, Quentin;
Landsman, David;
Lenfant, Nicolas;
Manning, Gerard;
Nozomi Nagano;
Srinivasan, Narayanaswamy;
O'Donovan, Claire

Publication type:

Proceeding

The challenge of increasing Pfam coverage of the human proteome.

Published in:

2013

By:

Mistry, Jaina;
Coggill, Penny;
Eberhardt, Ruth Y.;
Deiana, Antonio;
Giansanti, Andrea;
Finn, Robert D.;
Bateman, Alex;
Punta, Marco

Publication type:

Correction Notice

The challenge of increasing Pfam coverage of the human proteome.

Published in:

Database: The Journal of Biological Databases & Curation, 2013, v. 2013, p. 1, doi. 10.1093/database/bat023

By:

Mistry, Jaina;
Coggill, Penny;
Eberhardt, Ruth Y.;
Deiana, Antonio;
Giansanti, Andrea;
Finn, Robert D.;
Bateman, Alex;
Punta, Marco

Publication type:

Article

Escherichia coli RNA polymerase core and holoenzyme structures.

Published in:

EMBO Journal, 2000, v. 19, n. 24, p. 6833, doi. 10.1093/emboj/19.24.6833

By:

Finn, Robert D.;
Orlova, Elen V.;
Gowen, Brent;
Buck, Martin;
van Heel, Marina

Publication type:

Article

Cache Domains That are Homologous to, but Different from PAS Domains Comprise the Largest Superfamily of Extracellular Sensors in Prokaryotes.

Published in:

PLoS Computational Biology, 2016, v. 12, n. 4, p. 1, doi. 10.1371/journal.pcbi.1004862

By:

Upadhyay, Amit A.;
Fleetwood, Aaron D.;
Adebali, Ogun;
Finn, Robert D.;
Zhulin, Igor B.

Publication type:

Article

Diversity and specificity of molecular functions in cyanobacterial symbionts.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-69215-8

By:

Cameron, Ellen S.;
Sanchez, Santiago;
Goldman, Nick;
Blaxter, Mark L.;
Finn, Robert D.

Publication type:

Article

Screening of global microbiomes implies ecological boundaries impacting the distribution and dissemination of clinically relevant antimicrobial resistance genes.

Published in:

Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-022-04187-x

By:

Lin, Qiang;
Xavier, Basil Britto;
Alako, Blaise T. F.;
Mitchell, Alex L.;
Rajakani, Sahaya Glingston;
Glupczynski, Youri;
Finn, Robert D.;
Cochrane, Guy;
Malhotra-Kumar, Surbhi

Publication type:

Article

EMBL's European Bioinformatics Institute (EMBL-EBI) in 2024.

Published in:

Nucleic Acids Research, 2025, v. 53, n. D1, p. D10, doi. 10.1093/nar/gkae1089

By:

Thakur, Matthew;
Brooksbank, Catherine;
Finn, Robert D;
Firth, Helen V;
Foreman, Julia;
Freeberg, Mallory;
Gurwitz, Kim T;
Harrison, Melissa;
Hulcoop, David;
Hunt, Sarah E;
R. Leach, Andrew;
Levchenko, Mariia;
Marques, Diana;
McDonagh, Ellen M;
Mithani, Aziz;
Parkinson, Helen;
Perez-Riverol, Yasset;
Perova, Zinaida;
Sarkans, Ugis;
Tirunagari, Santosh

Publication type:

Article

SPIRE: a Searchable, Planetary-scale mIcrobiome REsource.

Published in:

Nucleic Acids Research, 2024, v. 52, n. D1, p. D777, doi. 10.1093/nar/gkad943

By:

Schmidt, Thomas S B;
Fullam, Anthony;
Ferretti, Pamela;
Orakov, Askarbek;
Maistrenko, Oleksandr M;
Ruscheweyh, Hans-Joachim;
Letunic, Ivica;
Duan, Yiqian;
Van Rossum, Thea;
Sunagawa, Shinichi;
Mende, Daniel R;
Finn, Robert D;
Kuhn, Michael;
Pedro Coelho, Luis;
Bork, Peer

Publication type:

Article

Pfam: The protein families database in 2021.

Published in:

Nucleic Acids Research, 2021, v. 49, n. D1, p. D412, doi. 10.1093/nar/gkaa913

By:

Mistry, Jaina;
Chuguransky, Sara;
Williams, Lowri;
Qureshi, Matloob;
Salazar, Gustavo A;
Sonnhammer, Erik L L;
Tosatto, Silvio C E;
Paladin, Lisanna;
Raj, Shriya;
Richardson, Lorna J;
Finn, Robert D;
Bateman, Alex

Publication type:

Article

Rfam 14: expanded coverage of metagenomic, viral and microRNA families.

Published in:

Nucleic Acids Research, 2021, v. 49, n. D1, p. D192, doi. 10.1093/nar/gkaa1047

By:

Kalvari, Ioanna;
Nawrocki, Eric P;
Ontiveros-Palacios, Nancy;
Argasinska, Joanna;
Lamkiewicz, Kevin;
Marz, Manja;
Griffiths-Jones, Sam;
Toffano-Nioche, Claire;
Gautheret, Daniel;
Weinberg, Zasha;
Rivas, Elena;
Eddy, Sean R;
Finn, Robert D;
Bateman, Alex;
Petrov, Anton I

Publication type:

Article

Genome3D: integrating a collaborative data pipeline to expand the depth and breadth of consensus protein structure annotation.

Published in:

Nucleic Acids Research, 2020, v. 48, n. D1, p. D314, doi. 10.1093/nar/gkz967

By:

Sillitoe, Ian;
Andreeva, Antonina;
Blundell, Tom L;
Buchan, Daniel W A;
Finn, Robert D;
Gough, Julian;
Jones, David;
Kelley, Lawrence A;
Paysan-Lafosse, Typhaine;
Lam, Su Datt;
Murzin, Alexey G;
Pandurangan, Arun Prasad;
Salazar, Gustavo A;
Skwark, Marcin J;
Sternberg, Michael J E;
Velankar, Sameer;
Orengo, Christine

Publication type:

Article

MGnify: the microbiome analysis resource in 2020.

Published in:

Nucleic Acids Research, 2020, v. 48, n. D1, p. D570, doi. 10.1093/nar/gkz1035

By:

Mitchell, Alex L;
Almeida, Alexandre;
Beracochea, Martin;
Boland, Miguel;
Burgin, Josephine;
Cochrane, Guy;
Crusoe, Michael R;
Kale, Varsha;
Potter, Simon C;
Richardson, Lorna J;
Sakharova, Ekaterina;
Scheremetjew, Maxim;
Korobeynikov, Anton;
Shlemov, Alex;
Kunyavskaya, Olga;
Lapidus, Alla;
Finn, Robert D

Publication type:

Article

EMBL-EBI search and sequence analysis tools APIs in 2019.

Published in:

Nucleic Acids Research, 2019, v. 47, n. W1, p. W636, doi. 10.1093/nar/gkz268

By:

Madeira, Fábio;
Park, Young mi;
Lee, Joon;
Buso, Nicola;
Gur, Tamer;
Madhusoodanan, Nandana;
Basutkar, Prasad;
Tivey, Adrian R N;
Potter, Simon C;
Finn, Robert D;
Lopez, Rodrigo

Publication type:

Article

The Pfam protein families database in 2019.

Published in:

Nucleic Acids Research, 2019, v. 47, n. D1, p. D427, doi. 10.1093/nar/gky995

By:

El-Gebali, Sara;
Mistry, Jaina;
Bateman, Alex;
Eddy, Sean R;
Luciani, Aurélien;
Potter, Simon C;
Qureshi, Matloob;
Richardson, Lorna J;
Salazar, Gustavo A;
Smart, Alfredo;
Sonnhammer, Erik L L;
Hirsh, Layla;
Paladin, Lisanna;
Piovesan, Damiano;
Tosatto, Silvio C E;
Finn, Robert D

Publication type:

Article

Genome properties in 2019: a new companion database to InterPro for the inference of complete functional attributes.

Published in:

Nucleic Acids Research, 2019, v. 47, n. D1, p. D564, doi. 10.1093/nar/gky1013

By:

Richardson, Lorna J;
Rawlings, Neil D;
Salazar, Gustavo A;
Almeida, Alexandre;
Haft, David R;
Ducq, Gregory;
Sutton, Granger G;
Finn, Robert D

Publication type:

Article

HMMER web server: 2018 update.

Published in:

Nucleic Acids Research, 2018, v. 46, n. W1, p. W200, doi. 10.1093/nar/gky448

By:

Potter, Simon C.;
Luciani, Aurélien;
Eddy, Sean R.;
Park, Youngmi;
Lopez, Rodrigo;
Finn, Robert D.

Publication type:

Article

The MEROPSdatabase of proteolytic enzymes, their substrates and inhibitors in 2017 and a comparison with peptidases in the PANTHER database.

Published in:

Nucleic Acids Research, 2018, v. 46, n. D1, p. D624, doi. 10.1093/nar/gkx1134

By:

Rawlings, Neil D;
Barrett, Alan J;
Thomas, Paul D;
Huang, Xiaosong;
Bateman, Alex;
Finn, Robert D

Publication type:

Article

Rfam 13.0: shifting to a genome-centric resource for non-coding RNA families.

Published in:

Nucleic Acids Research, 2018, v. 46, n. D1, p. D335, doi. 10.1093/nar/gkx1038

By:

Kalvari, Ioanna;
Argasinska, Joanna;
Quinones-Olvera, Natalia;
Nawrocki, Eric P;
Rivas, Elena;
Eddy, Sean R;
Bateman, Alex;
Finn, Robert D;
Petrov, Anton I

Publication type:

Article

Erratum to: Predicted Input of Uncultured Fungal Symbionts to a Lichen Symbiosis from Metagenome-Assembled Genomes.

Published in:

Genome Biology & Evolution, 2021, v. 13, n. 6, p. 1, doi. 10.1093/gbe/evab129

By:

Tagirdzhanova, Gulnara;
Saary, Paul;
Tingley, Jeffrey P;
Díaz-Escandón, David;
Abbott, D Wade;
Finn, Robert D;
Spribille, Toby

Publication type:

Article

Predicted Input of Uncultured Fungal Symbionts to a Lichen Symbiosis from Metagenome-Assembled Genomes.

Published in:

Genome Biology & Evolution, 2021, v. 13, n. 4, p. 1, doi. 10.1093/gbe/evab047

By:

Tagirdzhanova, Gulnara;
Saary, Paul;
Tingley, Jeffrey P;
Díaz-Escandón, David;
Abbott, D Wade;
Finn, Robert D;
Spribille, Toby

Publication type:

Article

Should the poultry red mite Dermanyssus gallinae be of wider concern for veterinary and medical science?

Published in:

Parasites & Vectors, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s13071-015-0768-7

By:

George, David R.;
Finn, Robert D.;
Graham, Kirsty M.;
Mul, Monique F.;
Maurer, Veronika;
Moro, Claire Valiente;
Sparagano, Olivier A. E.

Publication type:

Article

Present and future potential of plant-derived products to control arthropods of veterinary and medical significance.

Published in:

Parasites & Vectors, 2014, v. 7, n. 1, p. 1, doi. 10.1186/1756-3305-7-28

By:

George, David R.;
Finn, Robert D.;
Graham, Kirsty M.;
Sparagano, Olivier A. E.

Publication type:

Article

Cytochrome b null mouse: a new model for studying inherited skin disorders and the role of unsaturated fatty acids in normal homeostasis.

Published in:

Transgenic Research, 2011, v. 20, n. 3, p. 491, doi. 10.1007/s11248-010-9426-1

By:

Finn, Robert D.;
McLaughlin, Lesley A.;
Hughes, Catherine;
Chengli Song;
Henderson, Colin J.;
Wolf, C. Roland

Publication type:

Article

A Vaccinology Approach to the Identification and Characterization of Dermanyssus gallinae Candidate Protective Antigens for the Control of Poultry Red Mite Infestations.

Published in:

Vaccines, 2019, v. 7, n. 4, p. 190, doi. 10.3390/vaccines7040190

By:

Lima-Barbero, José Francisco;
Contreras, Marinela;
Mateos-Hernández, Lourdes;
Mata-Lorenzo, Francisco Manuel;
Triguero-Ocaña, Roxana;
Sparagano, Olivier;
Finn, Robert D.;
Strube, Christina;
Price, Daniel R.G.;
Nunn, Francesca;
Bartley, Kathryn;
Höfle, Ursula;
Boadella, Mariana;
Nisbet, Alasdair J.;
de la Fuente, José;
Villar, Margarita

Publication type:

Article

The Pfam protein families database.

Published in:

Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d138

By:

Bateman, Alex;
Coin, Lachlan;
Durbin, Richard;
Finn, Robert D.;
Hollich, Volker;
Griffiths‐Jones, Sam;
Khanna, Ajay;
Marshall, Mhairi;
Moxon, Simon;
Sonnhammer, Erik L. L.;
Studholme, David J.;
Yeats, Corin;
Eddy, Sean R.

Publication type:

Article

Pfam 3.1: 1313 multiple alignments and profile HMMs match the majority of proteins.

Published in:

Nucleic Acids Research, 1999, v. 27, n. 1, p. 260, doi. 10.1093/nar/27.1.260

By:

Bateman, Alex;
Birney, Ewan;
Durbin, Richard;
Eddy, Sean R.;
Finn, Robert D.;
Sonnhammer, Erik L. L.

Publication type:

Article

Microbial abundance, activity and population genomic profiling with mOTUs2.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-08844-4

By:

Milanese, Alessio;
Mende, Daniel R;
Paoli, Lucas;
Salazar, Guillem;
Ruscheweyh, Hans-Joachim;
Cuenca, Miguelangel;
Hingamp, Pascal;
Alves, Renato;
Costea, Paul I;
Coelho, Luis Pedro;
Schmidt, Thomas S. B.;
Almeida, Alexandre;
Mitchell, Alex L;
Finn, Robert D.;
Huerta-Cepas, Jaime;
Bork, Peer;
Zeller, Georg;
Sunagawa, Shinichi

Publication type:

Article

Structure and computational analysis of a novel protein with metallopeptidase-like and circularly permuted winged-helix-turn-helix domains reveals a possible role in modified polysaccharide biosynthesis.

Published in:

BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-75

By:

Das, Debanu;
Murzin, Alexey G.;
Rawlings, Neil D.;
Finn, Robert D.;
Coggill, Penelope;
Bateman, Alex;
Godzik, Adam;
Aravind, L.

Publication type:

Article