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Co-evolutionary Signals Identify Burkholderia pseudomallei Survival Strategies in a Hostile Environment.
- Published in:
- Molecular Biology & Evolution, 2022, v. 39, n. 1, p. 1, doi. 10.1093/molbev/msab306
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- Article
Comparative Analyses of Selection Operating on Nontranslated Intergenic Regions of Diverse Bacterial Species.
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- Genetics, 2017, v. 206, n. 1, p. 363, doi. 10.1534/genetics.116.195784
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- Publication type:
- Article
Gene Composition as a Potential Barrier to Large Recombinations in the Bacterial Pathogen Klebsiella pneumoniae.
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- Genome Biology & Evolution, 2019, v. 11, n. 11, p. 3240, doi. 10.1093/gbe/evz236
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- Article
Ecological Overlap and Horizontal Gene Transfer in Staphylococcus aureus and Staphylococcus epidermidis.
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- Genome Biology & Evolution, 2015, v. 7, n. 5, p. 1313, doi. 10.1093/gbe/evv066
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- Publication type:
- Article
A Very Early-Branching Staphylococcus aureus Lineage Lacking the Carotenoid Pigment Staphyloxanthin.
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- Genome Biology & Evolution, 2011, v. 3, p. 881, doi. 10.1093/gbe/evr078
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- Publication type:
- Article
The Persistence of Parasitic Plasmids.
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- Genetics, 2007, v. 177, n. 1, p. 399, doi. 10.1534/genetics.107.077420
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- Publication type:
- Article
Estimating recombinational parameters in Streptococcus pneumoniae from multilocus sequence....
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- Genetics, 2000, v. 154, n. 4, p. 1439, doi. 10.1093/genetics/154.4.1439
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- Publication type:
- Article
Identifying the effect of patient sharing on between-hospital genetic differentiation of methicillin-resistant Staphylococcus aureus.
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- Genome Medicine, 2016, v. 8, p. 1, doi. 10.1186/s13073-016-0274-3
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- Article
WGS of 1058 Enterococcus faecium from Copenhagen, Denmark, reveals rapid clonal expansion of vancomycin-resistant clone ST80 combined with widespread dissemination of a vanA-containing plasmid and acquisition of a heterogeneous accessory genome.
- Published in:
- 2019
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- Publication type:
- journal article
Stereoselective Bacterial Metabolism of Antibiotics in Environmental Bacteria – A Novel Biochemical Workflow.
- Published in:
- Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.562157
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- Publication type:
- Article
A Hopeful Sea-Monster: A Very Large Homologous Recombination Event Impacting the Core Genome of the Marine Pathogen Vibrio anguillarum.
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- Frontiers in Microbiology, 2020, v. 11, p. 1, doi. 10.3389/fmicb.2020.01430
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- Publication type:
- Article
Host migration impacts on the phylogeography of Lyme Borreliosis spirochaete species in Europe.
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- Environmental Microbiology, 2011, v. 13, n. 1, p. 184, doi. 10.1111/j.1462-2920.2010.02319.x
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- Publication type:
- Article
Burkholderia pseudomallei Is Genetically Diverse in Agricultural Land in Northeast Thailand.
- Published in:
- PLoS Neglected Tropical Diseases, 2009, v. 3, n. 8, p. 1, doi. 10.1371/journal.pntd.0000496
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- Publication type:
- Article
Burkholderia pseudomallei Is Genetically Diverse in Agricultural Land in Northeast Thailand.
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- PLoS Neglected Tropical Diseases, 2009, v. 3, n. 8, p. 1, doi. 10.1371/journal.pntd.0000496
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- Publication type:
- Article
The Impact of Recombination on dN/dS within Recently Emerged Bacterial Clones.
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- PLoS Pathogens, 2011, v. 7, n. 7, p. 1, doi. 10.1371/journal.ppat.1002129
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- Publication type:
- Article
From genotype to phenotype: can systems biology be used to predict Staphylococcus aureus virulence?
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- Nature Reviews Microbiology, 2012, v. 10, n. 11, p. 791, doi. 10.1038/nrmicro2880
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- Publication type:
- Article
Staphylococcus aureus populations from the gut and the blood are not distinguished by virulence traits—a critical role of host barrier integrity.
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- Microbiome, 2022, v. 10, n. 1, p. 1, doi. 10.1186/s40168-022-01419-4
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- Publication type:
- Article
The Promise of Whole Genome Pathogen Sequencing for the Molecular Epidemiology of Emerging Aquaculture Pathogens.
- Published in:
- Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00121
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- Publication type:
- Article
Multilocus variable-number tandem-repeat genotyping of Renibacterium salmoninarum, a bacterium causing bacterial kidney disease in salmonid fish.
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- BMC Microbiology, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1471-2180-13-285
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- Publication type:
- Article
Diversity and recombination in Wolbachia and Cardinium from Bryobia spider mites.
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- BMC Microbiology, 2012, v. 12, n. Suppl 1, p. 1, doi. 10.1186/1471-2180-12-S1-S13
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- Publication type:
- Article
Staphylococcus aureus lineages associated with a free-ranging population of the fruit bat Pteropus livingstonii retained over 25 years in captivity.
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- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-17835-3
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- Publication type:
- Article
Nematode Symbiont for Photorhabdus asymbiotica.
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- Emerging Infectious Diseases, 2006, v. 12, n. 10, p. 1562, doi. 10.3201/eid1210.060464
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- Article
Author Correction: Genome evolution and the emergence of pathogenicity in avian Escherichia coli.
- Published in:
- 2021
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- Publication type:
- Correction Notice
Genome evolution and the emergence of pathogenicity in avian Escherichia coli.
- Published in:
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-20988-w
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- Publication type:
- Article
Phylogeographic variation in recombination rates within a global clone of methicillin-resistant Staphylococcus aureus.
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- Genome Biology, 2012, v. 13, n. 12, p. 1
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- Publication type:
- Article
Correction: The Diversity and Geographical Structure of Orientia tsutsugamushi Strains from Scrub Typhus Patients in Laos.
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- 2016
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- Publication type:
- Correction Notice
The Diversity and Geographical Structure of Orientia tsutsugamushi Strains from Scrub Typhus Patients in Laos.
- Published in:
- PLoS Neglected Tropical Diseases, 2015, v. 9, n. 8, p. 1, doi. 10.1371/journal.pntd.0004024
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- Publication type:
- Article
Rapid Genomic Characterization and Global Surveillance of Klebsiella Using Pathogenwatch.
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- Clinical Infectious Diseases, 2021, v. 73, p. S325, doi. 10.1093/cid/ciab784
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- Publication type:
- Article
Opinion: Re-evaluating prokaryotic species.
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- Nature Reviews Microbiology, 2005, v. 3, n. 9, p. 733, doi. 10.1038/nrmicro1236
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- Publication type:
- Article
Small change: keeping pace with microevolution.
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- Nature Reviews Microbiology, 2004, v. 2, n. 6, p. 483, doi. 10.1038/nrmicro904
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- Publication type:
- Article
Stem Region of tRNA Genes Favors Transition Substitution Towards Keto Bases in Bacteria.
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- Journal of Molecular Evolution, 2022, v. 90, n. 1, p. 114, doi. 10.1007/s00239-021-10045-x
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- Publication type:
- Article
PIRATE: A fast and scalable pangenomics toolbox for clustering diverged orthologues in bacteria.
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- GigaScience, 2019, v. 8, n. 10, p. N.PAG, doi. 10.1093/gigascience/giz119
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- Publication type:
- Article
Piggy: a rapid, large-scale pan-genome analysis tool for intergenic regions in bacteria.
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- GigaScience, 2018, v. 7, n. 4, p. 1, doi. 10.1093/gigascience/giy015
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- Publication type:
- Article
The use of Oxford Nanopore native barcoding for complete genome assembly.
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- GigaScience, 2017, v. 6, n. 3, p. 1, doi. 10.1093/gigascience/gix001
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- Publication type:
- Article
Phylogeny of Vibrio vulnificus from the Analysis of the Core-Genome: Implications for Intra-Species Taxonomy.
- Published in:
- Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2017.02613
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- Publication type:
- Article
A Single Multilocus Sequence Typing (MLST) Scheme for Seven Pathogenic Leptospira Species.
- Published in:
- PLoS Neglected Tropical Diseases, 2013, v. 7, n. 1, p. 1, doi. 10.1371/journal.pntd.0001954
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- Publication type:
- Article
A Single Multilocus Sequence Typing (MLST) Scheme for Seven Pathogenic Leptospira Species.
- Published in:
- PLoS Neglected Tropical Diseases, 2013, v. 7, n. 1, p. 1, doi. 10.1371/journal.pntd.0001954
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- Publication type:
- Article
Comparison of Two Multilocus Sequence Based Genotyping Schemes for Leptospira Species.
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- PLoS Neglected Tropical Diseases, 2011, v. 5, n. 11, p. 1, doi. 10.1371/journal.pntd.0001374
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- Publication type:
- Article
Comparison of Two Multilocus Sequence Based Genotyping Schemes for Leptospira Species.
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- PLoS Neglected Tropical Diseases, 2011, v. 5, n. 11, p. 1, doi. 10.1371/journal.pntd.0001374
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- Publication type:
- Article
High Rates of Homologous Recombination in the Mite Endosymbiont and Opportunistic Human Pathogen Orientia tsutsugamushi.
- Published in:
- PLoS Neglected Tropical Diseases, 2010, v. 4, n. 7, p. 1, doi. 10.1371/journal.pntd.0000752
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- Publication type:
- Article
High Rates of Homologous Recombination in the Mite Endosymbiont and Opportunistic Human Pathogen Orientia tsutsugamushi.
- Published in:
- PLoS Neglected Tropical Diseases, 2010, v. 4, n. 7, p. 1, doi. 10.1371/journal.pntd.0000752
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- Publication type:
- Article
Historical Zoonoses and Other Changes in Host Tropism of <i>Staphylococcus aureus</i>, Identified by Phylogenetic Analysis of a Population Dataset
- Published in:
- PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0062369
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- Publication type:
- Article
Multi-Locus Sequence Typing of a Geographically and Temporally Diverse Sample of the Highly Clonal Human Pathogen Bartonella quintana.
- Published in:
- PLoS ONE, 2010, v. 5, n. 3, p. 1, doi. 10.1371/journal.pone.0009765
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- Publication type:
- Article
EpiCollect: Linking Smartphones to Web Applications for Epidemiology, Ecology and Community Data Collection.
- Published in:
- PLoS ONE, 2009, v. 4, n. 9, p. 1, doi. 10.1371/journal.pone.0006968
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- Publication type:
- Article
Biogeography and Virulence of Staphylococcus aureus.
- Published in:
- PLoS ONE, 2009, v. 4, n. 7, p. 1, doi. 10.1371/journal.pone.0006216
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- Publication type:
- Article
Fine-Scale Phylogeographic Structure of Borrelia lusitaniae Revealed by Multilocus Sequence Typing.
- Published in:
- PLoS ONE, 2008, v. 3, n. 12, p. 1, doi. 10.1371/journal.pone.0004002
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- Publication type:
- Article
Incorporation of transition to transversion ratio and nonsense mutations, improves the estimation of the number of synonymous and non-synonymous sites in codons.
- Published in:
- DNA Research, 2022, v. 29, n. 4, p. 1, doi. 10.1093/dnares/dsac023
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- Publication type:
- Article
Atypical AT Skew in Firmicute Genomes Results from Selection and Not from Mutation.
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- PLoS Genetics, 2011, v. 7, n. 9, p. 1, doi. 10.1371/journal.pgen.1002283
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- Publication type:
- Article
Real time monitoring of Aeromonas salmonicida evolution in response to successive antibiotic therapies in a commercial fish farm.
- Published in:
- Environmental Microbiology, 2019, v. 21, n. 3, p. 1113, doi. 10.1111/1462-2920.14531
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- Publication type:
- Article
Molecular epidemiology and population structure of the honey bee brood pathogen Melissococcus plutonius.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 8, p. 1588, doi. 10.1038/ismej.2014.20
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- Article