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Exome resequencing and GWAS for growth, ecophysiology, and chemical and metabolomic composition of wood of Populus trichocarpa.
Published in:
BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-6160-9
By:
- Guerra, Fernando P.;
- Suren, Haktan;
- Holliday, Jason;
- Richards, James H.;
- Fiehn, Oliver;
- Famula, Randi;
- Stanton, Brian J.;
- Shuren, Richard;
- Sykes, Robert;
- Davis, Mark F.;
- Neale, David B.
Publication type:
Article
Genome Synteny Has Been Conserved Among the Octoploid Progenitors of Cultivated Strawberry Over Millions of Years of Evolution.
Published in:
Frontiers in Plant Science, 2020, v. 10, p. 1, doi. 10.3389/fpls.2019.01789
By:
- Hardigan, Michael A.;
- Feldmann, Mitchell J.;
- Lorant, Anne;
- Bird, Kevin A.;
- Famula, Randi;
- Acharya, Charlotte;
- Cole, Glenn;
- Edger, Patrick P.;
- Knapp, Steven J.
Publication type:
Article
Multi-dimensional machine learning approaches for fruit shape phenotyping in strawberry.
Published in:
GigaScience, 2020, v. 9, n. 5, p. N.PAG, doi. 10.1093/gigascience/giaa030
By:
- Feldmann, Mitchell J;
- Hardigan, Michael A;
- Famula, Randi A;
- López, Cindy M;
- Tabb, Amy;
- Cole, Glenn S;
- Knapp, Steven J
Publication type:
Article
The walnut ( Juglans regia) genome sequence reveals diversity in genes coding for the biosynthesis of non-structural polyphenols.
Published in:
Plant Journal, 2016, v. 87, n. 5, p. 507, doi. 10.1111/tpj.13207
By:
- Martínez‐García, Pedro J.;
- Crepeau, Marc W.;
- Puiu, Daniela;
- Gonzalez‐Ibeas, Daniel;
- Whalen, Jeanne;
- Stevens, Kristian A.;
- Paul, Robin;
- Butterfield, Timothy S.;
- Britton, Monica T.;
- Reagan, Russell L.;
- Chakraborty, Sandeep;
- Walawage, Sriema L.;
- Vasquez‐Gross, Hans A.;
- Cardeno, Charis;
- Famula, Randi A.;
- Pratt, Kevin;
- Kuruganti, Sowmya;
- Aradhya, Mallikarjuna K.;
- Leslie, Charles A.;
- Dandekar, Abhaya M.
Publication type:
Article
Accelerating genetic gains for quantitative resistance to verticillium wilt through predictive breeding in strawberry.
Published in:
Plant Genome, 2024, v. 17, n. 1, p. 1, doi. 10.1002/tpg2.20405
By:
- Feldmann, Mitchell J.;
- Pincot, Dominique D. A.;
- Vachev, Mishi V.;
- Famula, Randi A.;
- Cole, Glenn S.;
- Knapp, Steven J.
Publication type:
Article
A medium‐density genotyping platform for cultivated strawberry using DArTag technology.
Published in:
Plant Genome, 2023, v. 16, n. 4, p. 1, doi. 10.1002/tpg2.20399
By:
- Hardigan, Michael A.;
- Feldmann, Mitchell J.;
- Carling, Jason;
- Zhu, Anyu;
- Kilian, Andrzej;
- Famula, Randi A.;
- Cole, Glenn S.;
- Knapp, Steven J.
Publication type:
Article
Harnessing underutilized gene bank diversity and genomic prediction of cross usefulness to enhance resistance to Phytophthora cactorum in strawberry.
Published in:
Plant Genome, 2023, v. 16, n. 1, p. 1, doi. 10.1002/tpg2.20275
By:
- Jiménez, Nicolás P.;
- Feldmann, Mitchell J.;
- Famula, Randi A.;
- Pincot, Dominique D. A.;
- Bjornson, Marta;
- Cole, Glenn S.;
- Knapp, Steven J.
Publication type:
Article
Accuracy of genomic selection and long‐term genetic gain for resistance to Verticillium wilt in strawberry.
Published in:
Plant Genome, 2020, v. 13, n. 3, p. 1, doi. 10.1002/tpg2.20054
By:
- Pincot, Dominique D. A.;
- Hardigan, Michael A.;
- Cole, Glenn S.;
- Famula, Randi A.;
- Henry, Peter M.;
- Gordon, Thomas R.;
- Knapp, Steven J.
Publication type:
Article
Unraveling the Complex Hybrid Ancestry and Domestication History of Cultivated Strawberry.
Published in:
Molecular Biology & Evolution, 2021, v. 38, n. 6, p. 2285, doi. 10.1093/molbev/msab024
By:
- Hardigan, Michael A;
- Lorant, Anne;
- Pincot, Dominique D A;
- Feldmann, Mitchell J;
- Famula, Randi A;
- Acharya, Charlotte B;
- Lee, Seonghee;
- Verma, Sujeet;
- Whitaker, Vance M;
- Bassil, Nahla;
- Zurn, Jason;
- Cole, Glenn S;
- Bird, Kevin;
- Edger, Patrick P;
- Knapp, Steven J
Publication type:
Article
Genomic prediction of strawberry resistance to postharvest fruit decay caused by the fungal pathogen Botrytis cinerea.
Published in:
G3: Genes | Genomes | Genetics, 2022, v. 12, n. 1, p. 1, doi. 10.1093/g3journal/jkab378
By:
- Petrasch, Stefan;
- Mesquida-Pesci, Saskia D.;
- Pincot, Dominique D. A.;
- Feldmann, Mitchell J.;
- López, Cindy M.;
- Famula, Randi;
- Hardigan, Michael A.;
- Cole, Glenn S.;
- Knapp, Steven J.;
- Blanco-Ulate, Barbara
Publication type:
Article
Comparative Transcriptomics Among Four White Pine Species.
Published in:
G3: Genes | Genomes | Genetics, 2018, v. 8, n. 5, p. 1461, doi. 10.1534/g3.118.200257
By:
- Baker, Ethan A. G.;
- Wegrzyn, Jill L.;
- Sezen, Uzay U.;
- Falk, Taylor;
- Maloney, Patricia E.;
- Vogler, Detlev R.;
- Delfino-Mix, Annette;
- Jensen, Camille;
- Mitton, Jeffry;
- Wright, Jessica;
- Knaus, Brian;
- Rai, Hardeep;
- Cronn, Richard;
- Gonzalez-Ibeas, Daniel;
- Vasquez-Gross, Hans A.;
- Famula, Randi A.;
- Jun-Jun Liu;
- Kueppers, Lara M.;
- Neale, David B.
Publication type:
Article
Assessing the Gene Content of the Megagenome: Sugar Pine (Pinus lambertiana).
Published in:
G3: Genes | Genomes | Genetics, 2016, v. 6, n. 12, p. 3787, doi. 10.1534/g3.116.032805
By:
- Gonzalez-Ibeas, Daniel;
- Martinez-Garcia, Pedro J.;
- Famula, Randi A.;
- Delfino-Mix, Annette;
- Stevens, Kristian A.;
- Loopstra, Carol A.;
- Langley, Charles H.;
- Neale, David B.;
- Wegrzyn, Jill L.
Publication type:
Article
Novel Fusarium wilt resistance genes uncovered in natural and cultivated strawberry populations are found on three non-homoeologous chromosomes.
Published in:
Theoretical & Applied Genetics, 2022, v. 135, n. 6, p. 2121, doi. 10.1007/s00122-022-04102-2
By:
- Pincot, Dominique D. A.;
- Feldmann, Mitchell J.;
- Hardigan, Michael A.;
- Vachev, Mishi V.;
- Henry, Peter M.;
- Gordon, Thomas R.;
- Bjornson, Marta;
- Rodriguez, Alan;
- Cobo, Nicolas;
- Famula, Randi A.;
- Cole, Glenn S.;
- Coaker, Gitta L.;
- Knapp, Steven J.
Publication type:
Article
A multi‐omics framework reveals strawberry flavor genes and their regulatory elements.
Published in:
New Phytologist, 2022, v. 236, n. 3, p. 1089, doi. 10.1111/nph.18416
By:
- Fan, Zhen;
- Tieman, Denise M.;
- Knapp, Steven J.;
- Zerbe, Philipp;
- Famula, Randi;
- Barbey, Christopher R.;
- Folta, Kevin M.;
- Amadeu, Rodrigo R.;
- Lee, Manbo;
- Oh, Youngjae;
- Lee, Seonghee;
- Whitaker, Vance M.
Publication type:
Article
High-throughput marker assays for FaRPc2-mediated resistance to Phytophthora crown rot in octoploid strawberry.
Published in:
Molecular Breeding, 2018, v. 38, n. 8, p. 1, doi. 10.1007/s11032-018-0861-7
By:
- Noh, Young-Hee;
- Oh, Youngjae;
- Mangandi, Jozer;
- Verma, Sujeet;
- Zurn, Jason D.;
- Lu, Yi-Tien;
- Fan, Zhen;
- Bassil, Nahla;
- Peres, Natalia;
- Cole, Glenn;
- Acharya, Charlotte;
- Famula, Randi;
- Knapp, Steve;
- Whitaker, Vance M.;
- Lee, Seonghee
Publication type:
Article
Association genetics of carbon isotope discrimination and leaf morphology in a breeding population of Juglans regia L.
Published in:
Tree Genetics & Genomes, 2019, v. 15, n. 1, p. 1, doi. 10.1007/s11295-018-1307-4
By:
- Famula, Randi A.;
- Richards, James H.;
- Famula, Thomas R.;
- Neale, David B.
Publication type:
Article
Predicting breeding values and genetic components using generalized linear mixed models for categorical and continuous traits in walnut ( Juglans regia).
Published in:
Tree Genetics & Genomes, 2017, v. 13, n. 5, p. 1, doi. 10.1007/s11295-017-1187-z
By:
- Martínez-García, Pedro;
- Famula, Randi;
- Leslie, Charles;
- McGranahan, Gale;
- Famula, Thomas;
- Neale, David
Publication type:
Article
Analysis of the genetic variation in growth, ecophysiology, and chemical and metabolomic composition of wood of Populus trichocarpa provenances.
Published in:
Tree Genetics & Genomes, 2016, v. 12, n. 1, p. 1, doi. 10.1007/s11295-015-0965-8
By:
- Guerra, Fernando P.;
- Richards, James H.;
- Fiehn, Oliver;
- Famula, Randi;
- Stanton, Brian J.;
- Shuren, Richard;
- Sykes, Robert;
- Davis, Mark F.;
- Neale, David B.
Publication type:
Article
GWAS on the Attack by Aspen Borer Saperda calcarata on Black Cottonwood Trees Reveals a Response Mechanism Involving Secondary Metabolism and Independence of Tree Architecture.
Published in:
Forests (19994907), 2023, v. 14, n. 6, p. 1129, doi. 10.3390/f14061129
By:
- Sepúlveda, Sebastián L.;
- Neale, David B.;
- Holliday, Jason A.;
- Famula, Randi;
- Fiehn, Oliver;
- Stanton, Brian J.;
- Guerra, Fernando P.
Publication type:
Article

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