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Retrospective analysis of hospital electronic health records reveals unseen cases of acute hepatitis with unknown aetiology in adults in Oxfordshire.
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- BMC Public Health, 2024, v. 24, n. 1, p. 1, doi. 10.1186/s12889-024-19292-1
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- Article
Improving the representativeness of UK's national COVID-19 Infection Survey through spatio-temporal regression and post-stratification.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-49201-4
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- Article
Improving the representativeness of UK's national COVID-19 Infection Survey through spatio-temporal regression and post-stratification.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-49201-4
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- Article
Deep reinforcement learning for multi-class imbalanced training: applications in healthcare.
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- Machine Learning, 2024, v. 113, n. 5, p. 2655, doi. 10.1007/s10994-023-06481-z
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- Article
The epidemiology of multidrug-resistant organisms in persons diagnosed with cancer in Norway, 2008–2018: expanding surveillance using existing laboratory and register data.
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- European Journal of Clinical Microbiology & Infectious Diseases, 2024, v. 43, n. 1, p. 121, doi. 10.1007/s10096-023-04698-3
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- Article
Protection against SARS-CoV-2 Omicron BA.4/5 variant following booster vaccination or breakthrough infection in the UK.
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- Nature Communications, 2023, n. 1, p. 1, doi. 10.1038/s41467-023-38275-1
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- Article
An adversarial training framework for mitigating algorithmic biases in clinical machine learning.
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- NPJ Digital Medicine, 2023, n. 1, p. 1, doi. 10.1038/s41746-023-00805-y
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- Article
The quality of vital signs measurements and value preferences in electronic medical records varies by hospital, specialty, and patient demographics.
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- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-30691-z
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- Article
Omicron-Associated Changes in Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Symptoms in the United Kingdom.
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- Clinical Infectious Diseases, 2023, v. 76, n. 3, p. e133, doi. 10.1093/cid/ciac613
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- Article
Mortality risks associated with empirical antibiotic activity in Escherichia coli bacteraemia: an analysis of electronic health records.
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- 2022
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- journal article
Time-of-Day Variation in SARS-CoV-2 RNA Levels during the Second Wave of COVID-19.
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- Viruses (1999-4915), 2022, v. 14, n. 8, p. 1728, doi. 10.3390/v14081728
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Symptoms and Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Positivity in the General Population in the United Kingdom.
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- Clinical Infectious Diseases, 2022, v. 75, n. 1, p. e329, doi. 10.1093/cid/ciab945
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- Article
SARS-CoV-2 antibody trajectories after a single COVID-19 vaccination with and without prior infection.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-31495-x
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- Article
Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infectivity by Viral Load, S Gene Variants and Demographic Factors, and the Utility of Lateral Flow Devices to Prevent Transmission.
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- Clinical Infectious Diseases, 2022, v. 74, n. 3, p. 407, doi. 10.1093/cid/ciab421
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- Article
Antimicrobial resistance in commensal opportunistic pathogens isolated from non-sterile sites can be an effective proxy for surveillance in bloodstream infections.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-02755-5
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- Article
Improving patient flow during infectious disease outbreaks using machine learning for real-time prediction of patient readiness for discharge.
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- PLoS ONE, 2021, v. 16, n. 11, p. 1, doi. 10.1371/journal.pone.0260476
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- Article
Probabilistic modelling of effects of antibiotics and calendar time on transmission of healthcare-associated infection.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-00748-y
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- Article
Reduction in incidence of non‐COVID‐19 respiratory virus infection amongst haematology inpatients following UK social distancing measures.
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- British Journal of Haematology, 2021, v. 195, n. 2, p. 194, doi. 10.1111/bjh.17651
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- Article
Transmission of community- and hospital-acquired SARS-CoV-2 in hospital settings in the UK: A cohort study.
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- PLoS Medicine, 2021, v. 18, n. 10, p. 1, doi. 10.1371/journal.pmed.1003816
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Development and validation of early warning score systems for COVID‐19 patients.
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- Healthcare Technology Letters, 2021, v. 8, n. 5, p. 105, doi. 10.1049/htl2.12009
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- Article
Human and Porcine Transmission of Clostridioides difficile Ribotype 078, Europe.
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- 2021
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- journal article
Ct threshold values, a proxy for viral load in community SARS-CoV-2 cases, demonstrate wide variation across populations and over time.
- Published in:
- eLife, 2021, p. 1, doi. 10.7554/eLife.64683
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- Article
Major genetic discontinuity and novel toxigenic species in Clostridioides difficile taxonomy.
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- eLife, 2021, p. 1, doi. 10.7554/eLife.64325
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- Article
Stringent thresholds in SARS-CoV-2 IgG assays lead to under-detection of mild infections.
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- 2021
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- journal article
SARS-CoV-2 antibody prevalence, titres and neutralising activity in an antenatal cohort, United Kingdom, 14 April to 15 June 2020.
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- Eurosurveillance (15607917), 2020, v. 25, n. 42, p. 18, doi. 10.2807/1560-7917.es.2020.25.41.2001721
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In vitro activity of eravacycline against common ribotypes of Clostridioides difficile.
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- 2020
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- journal article
Differential occupational risks to healthcare workers from SARS-CoV-2 observed during a prospective observational study.
- Published in:
- eLife, 2020, p. 1, doi. 10.7554/eLife.60675
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- Article
Genetic Heterogeneity of Australian Candida auris Isolates: Insights From a Nonoutbreak Setting Using Whole-Genome Sequencing.
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- Open Forum Infectious Diseases, 2020, v. 7, n. 5, p. 1, doi. 10.1093/ofid/ofaa158
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- Article
Male gender is an independent predictor for worse survival and relapse in a large, consecutive cohort of elderly DLBCL patients treated with R‐CHOP.
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- British Journal of Haematology, 2019, v. 186, n. 4, p. e94, doi. 10.1111/bjh.15927
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- Article
WGS to determine the extent of Clostridioides difficile transmission in a high incidence setting in North Wales in 2015.
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- 2019
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- journal article
Detection in the United Kingdom of the Neisseria gonorrhoeae FC428 clone, with ceftriaxone resistance and intermediate resistance to azithromycin, October to December 2018.
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- Eurosurveillance (15607917), 2019, v. 24, n. 10, p. 2, doi. 10.2807/1560-7917.ES.2019.24.10.1900147
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- Article
Clostridium difficile: Investigating Transmission Patterns Between Infected and Colonized Patients Using Whole Genome Sequencing.
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- Clinical Infectious Diseases, 2019, v. 68, n. 2, p. 204, doi. 10.1093/cid/ciy457
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- Article
Patient and Strain Characteristics Associated With Clostridium difficile Transmission and Adverse Outcomes.
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- Clinical Infectious Diseases, 2018, v. 67, n. 9, p. 1379, doi. 10.1093/cid/ciy302
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- Article
Two Distinct Patterns of Clostridium difficile Diversity Across Europe Indicating Contrasting Routes of Spread.
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- Clinical Infectious Diseases, 2018, v. 67, n. 7, p. 1035, doi. 10.1093/cid/ciy252
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- Article
Real-time analysis of nanopore-based metagenomic sequencing from infected orthopaedic devices.
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- BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-5094-y
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- Article
Gonorrhoea treatment failure caused by a Neisseria gonorrhoeae strain with combined ceftriaxone and high-level azithromycin resistance, England, February 2018.
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- Eurosurveillance (15607917), 2018, v. 23, n. 27, p. 1, doi. 10.2807/1560-7917.ES.2018.23.27.1800323
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- Article
Results of a multicentre UK-wide compassionate use programme evaluating the efficacy of idelalisib monotherapy in relapsed, refractory follicular lymphoma.
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- British Journal of Haematology, 2018, v. 181, n. 4, p. 555, doi. 10.1111/bjh.14665
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BugMat and FindNeighbour: command line and server applications for investigating bacterial relatedness.
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- BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1907-2
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- Article
Results of a multicentre UK-wide retrospective study evaluating the efficacy of brentuximab vedotin in relapsed, refractory classical Hodgkin lymphoma in the transplant naive setting.
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- British Journal of Haematology, 2017, v. 179, n. 3, p. 471, doi. 10.1111/bjh.14898
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- Article
Covert dissemination of carbapenemase-producing Klebsiella pneumoniae (KPC) in a successfully controlled outbreak: long- and short-read whole-genome sequencing demonstrate multiple genetic modes of transmission.
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- 2017
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- journal article
Epidemiology of Clostridium difficile in infants in Oxfordshire, UK: Risk factors for colonization and carriage, and genetic overlap with regional C. difficile infection strains.
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- PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0182307
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- Article
Comparison of Control of Clostridium difficile Infection in Six English Hospitals Using Whole-Genome Sequencing.
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- Clinical Infectious Diseases, 2017, v. 65, n. 3, p. 433, doi. 10.1093/cid/cix338
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- Article
WGS to predict antibiotic MICs for Neisseria gonorrhoeae.
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- 2017
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- Publication type:
- journal article
Contribution to Clostridium Difficile Transmission of Symptomatic Patients With Toxigenic Strains Who Are Fecal Toxin Negative.
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- Clinical Infectious Diseases, 2017, v. 64, n. 9, p. 1163, doi. 10.1093/cid/cix079
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- Article
Results of a multicentre UK-wide retrospective study evaluating the efficacy of pixantrone in relapsed, refractory diffuse large B cell lymphoma.
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- British Journal of Haematology, 2016, v. 173, n. 6, p. 896, doi. 10.1111/bjh.14021
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- Article
Results of a large retrospective analysis of the effect of intended dose intensity of R- CHOP on outcome in a cohort of consecutive, unselected elderly patients with de novo diffuse large B cell lymphoma.
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- British Journal of Haematology, 2016, v. 173, n. 3, p. 487, doi. 10.1111/bjh.13619
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- Article
Whole-Genome Sequencing Demonstrates That Fidaxomicin Is Superior to Vancomycin for Preventing Reinfection and Relapse of Infection With Clostridium difficile.
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- Journal of Infectious Diseases, 2014, v. 209, n. 9, p. 1446, doi. 10.1093/infdis/jit598
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- Article
Evolutionary History of the Clostridium difficile Pathogenicity Locus.
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- Genome Biology & Evolution, 2014, v. 6, n. 1, p. 36, doi. 10.1093/gbe/evt204
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Asymptomatic <i>Clostridium difficile</i> Colonisation and Onward Transmission.
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- PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0078445
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- Article
Regarding “Clostridium Difficile Ribotype Does Not Predict Severe Infection”.
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- Clinical Infectious Diseases, 2013, v. 56, n. 12, p. 1845, doi. 10.1093/cid/cit098
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- Article