Works matching AU Evguenieva-Hackenberg, Elena

Results: 33

Rapid Biophysical Characterization and NMR Spectroscopy Structural Analysis of Small Proteins from Bacteria and Archaea.

Published in:

ChemBioChem, 2020, v. 21, n. 8, p. 1178, doi. 10.1002/cbic.201900677

By:

Kubatova, Nina;
Pyper, Dennis J.;
Jonker, Hendrik R. A.;
Saxena, Krishna;
Remmel, Laura;
Richter, Christian;
Brantl, Sabine;
Evguenieva‐Hackenberg, Elena;
Hess, Wolfgang R.;
Klug, Gabriele;
Marchfelder, Anita;
Soppa, Jörg;
Streit, Wolfgang;
Mayzel, Maxim;
Orekhov, Vladislav Y.;
Fuxreiter, Monika;
Schmitz, Ruth A.;
Schwalbe, Harald

Publication type:

Article

Characterization of native and reconstituted exosome complexes from the hyperthermophilic archaeon Sulfolobus solfataricus.

Published in:

Molecular Microbiology, 2006, v. 62, n. 4, p. 1076, doi. 10.1111/j.1365-2958.2006.05393.x

By:

Walter, Pamela;
Klein, Franziska;
Lorentzen, Esben;
Ilchmann, Anne;
Klug, Gabriele;
Evguenieva-Hackenberg, Elena

Publication type:

Article

Bacterial ribosomal RNA in pieces.

Published in:

Molecular Microbiology, 2005, v. 57, n. 2, p. 318, doi. 10.1111/j.1365-2958.2005.04662.x

By:

Evguenieva-Hackenberg, Elena

Publication type:

Article

Incoherent dual regulation by a SAM-II riboswitch controlling translation at a distance.

Published in:

RNA Biology, 2022, v. 19, n. 1, p. 980, doi. 10.1080/15476286.2022.2110380

By:

Scheuer, Robina;
Dietz, Theresa;
Kretz, Jonas;
Hadjeras, Lydia;
McIntosh, Matthew;
Evguenieva-Hackenberg, Elena

Publication type:

Article

Bioinformatic prediction reveals posttranscriptional regulation of the chromosomal replication initiator gene dnaA by the attenuator sRNA rnTrpL in Escherichia coli.

Published in:

RNA Biology, 2021, v. 18, n. 9, p. 1324, doi. 10.1080/15476286.2020.1846388

By:

Li, Siqi;
Edelmann, Daniel;
Berghoff, Bork A.;
Georg, Jens;
Evguenieva-Hackenberg, Elena

Publication type:

Article

Conserved small mRNA with an unique, extended Shine-Dalgarno sequence.

Published in:

RNA Biology, 2017, v. 14, n. 10, p. 1353, doi. 10.1080/15476286.2016.1256534

By:

Hahn, Julia;
Thalmann, Sebastian;
Migur, Anzhela;
von Boeselager, Raphael Freiherr;
Kubatova, Nina;
Kubareva, Elena;
Schwalbe, Harald;
Evguenieva-Hackenberg, Elena

Publication type:

Article

The stress-related, rhizobial small RNA RcsR1 destabilizes the autoinducer synthase encoding mRNA sinI in Sinorhizobium meliloti.

Published in:

RNA Biology, 2016, v. 13, n. 5, p. 486, doi. 10.1080/15476286.2015.1110673

By:

Baumgardt, Kathrin;
Šmídová, Klára;
Rahn, Helen;
Lochnit, Günter;
Robledo, Marta;
Evguenieva-Hackenberg, Elena

Publication type:

Article

Nop5 interacts with the archaeal RNA exosome.

Published in:

FEBS Letters, 2017, v. 591, n. 24, p. 4039, doi. 10.1002/1873-3468.12915

By:

Gauernack, A. Susann;
Lassek, Christian;
Hou, Linlin;
Dzieciolowski, Julia;
Evguenieva‐Hackenberg, Elena;
Klug, Gabriele

Publication type:

Article

Small Open Reading Frames, Non-Coding RNAs and Repetitive Elements in Bradyrhizobium japonicum USDA 110.

Published in:

PLoS ONE, 2016, v. 11, n. 10, p. 1, doi. 10.1371/journal.pone.0165429

By:

Hahn, Julia;
Tsoy, Olga V.;
Thalmann, Sebastian;
Čuklina, Jelena;
Gelfand, Mikhail S.;
Evguenieva-Hackenberg, Elena

Publication type:

Article

Similarities and differences between 6S RNAs from Bradyrhizobium japonicum and Sinorhizobium meliloti.

Published in:

Journal of Microbiology, 2020, v. 58, n. 11, p. 945, doi. 10.1007/s12275-020-0283-1

By:

Burenina, Olga Y.;
Elkina, Daria A.;
Migur, Anzhela Y.;
Oretskaya, Tatiana S.;
Evguenieva-Hackenberg, Elena;
Hartmann, Roland K.;
Kubareva, Elena A.

Publication type:

Article

Homoserine Lactones Influence the Reaction of Plants to Rhizobia.

Published in:

International Journal of Molecular Sciences, 2013, v. 14, n. 8, p. 17122, doi. 10.3390/ijms140817122

By:

Zarkani, Azhar A.;
Stein, Elke;
Röhrich, Christian R.;
Schikora, Marek;
Evguenieva-Hackenberg, Elena;
Degenkolb, Thomas;
Vilcinskas, Andreas;
Klug, Gabriele;
Kogel, Karl-Heinz;
Schikora, Adam

Publication type:

Article

RNA polyadenylation in Archaea: not observed in Haloferax while the exosome polynucleotidylates RNA in Sulfolobus.

Published in:

EMBO Reports, 2005, v. 6, n. 12, p. 1188, doi. 10.1038/sj.embor.7400571

By:

Portnoy, Victoria;
Evguenieva-Hackenberg, Elena;
Klein, Franziska;
Walter, Pamela;
Lorentzen, Esben;
Klug, Gabriele;
Schuster, Gadi

Publication type:

Article

An exosome-like complex in Sulfolobus solfataricus.

Published in:

EMBO Reports, 2003, v. 4, n. 9, p. 889, doi. 10.1038/sj.embor.embor929

By:

Evguenieva-Hackenberg, Elena;
Walter, Pamela;
Hochleitner, Elisabeth;
Lottspeich, Friedrich;
Klug, Gabriele

Publication type:

Article

The evolutionarily conserved subunits Rrp4 and Csl4 confer different substrate specificities to the archaeal exosome

Published in:

FEBS Letters, 2010, v. 584, n. 13, p. 2931, doi. 10.1016/j.febslet.2010.05.014

By:

Roppelt, Verena;
Klug, Gabriele;
Evguenieva-Hackenberg, Elena

Publication type:

Article

The archaeal exosome localizes to the membrane

Published in:

FEBS Letters, 2010, v. 584, n. 13, p. 2791, doi. 10.1016/j.febslet.2010.05.013

By:

Roppelt, Verena;
Hobel, Cédric F.V.;
Albers, Sonja V.;
Lassek, Christian;
Schwarz, Heinz;
Klug, Gabriele;
Evguenieva-Hackenberg, Elena

Publication type:

Article

RNase J is involved in the 5′-end maturation of 16S rRNA and 23S rRNA in Sinorhizobium meliloti

Published in:

FEBS Letters, 2009, v. 583, n. 14, p. 2339, doi. 10.1016/j.febslet.2009.06.026

By:

Madhugiri, Ramakanth;
Evguenieva-Hackenberg, Elena

Publication type:

Article

Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2602-9

By:

Čuklina, Jelena;
Hahn, Julia;
Imakaev, Maxim;
Omasits, Ulrich;
Förstner, Konrad U.;
Ljubimov, Nikolay;
Goebel, Melanie;
Pessi, Gabriella;
Fischer, Hans-Martin;
Ahrens, Christian H.;
Gelfand, Mikhail S.;
Evguenieva-Hackenberg, Elena

Publication type:

Article

Reprograming of sRNA target specificity by the leader peptide peTrpL in response to antibiotic exposure.

Published in:

Nucleic Acids Research, 2021, v. 49, n. 5, p. 2894, doi. 10.1093/nar/gkab093

By:

Melior, Hendrik;
Li, Siqi;
Stötzel, Maximilian;
Maaß, Sandra;
Schütz, Rubina;
Azarderakhsh, Saina;
Shevkoplias, Aleksei;
Barth-Weber, Susanne;
Baumgardt, Kathrin;
Ziebuhr, John;
Förstner, Konrad U;
Chervontseva, Zoe;
Becher, Dörte;
Evguenieva-Hackenberg, Elena

Publication type:

Article

Transcription attenuation-derived small RNA rnTrpL regulates tryptophan biosynthesis gene expression in trans.

Published in:

Nucleic Acids Research, 2019, v. 47, n. 12, p. 6396, doi. 10.1093/nar/gkz274

By:

Melior, Hendrik;
Li, Siqi;
Madhugiri, Ramakanth;
Stötzel, Maximilian;
Azarderakhsh, Saina;
Barth-Weber, Susanne;
Baumgardt, Kathrin;
Ziebuhr, John;
Evguenieva-Hackenberg, Elena

Publication type:

Article

The SmAP1/2 proteins of the crenarchaeon Sulfolobus solfataricus interact with the exosome and stimulate A-rich tailing of transcripts.

Published in:

Nucleic Acids Research, 2017, v. 45, n. 13, p. 7938, doi. 10.1093/nar/gkx437

By:

Märtens, Birgit;
Linlin Hou;
Amman, Fabian;
Wolfinger, Michael T.;
Evguenieva-Hackenberg, Elena;
Bläsi, Udo

Publication type:

Article

Archaeal DnaG contains a conserved N-terminal RNA-binding domain and enables tailing of rRNA by the exosome.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 20, p. 12691, doi. 10.1093/nar/gku969

By:

Hou, Linlin;
Klug, Gabriele;
Evguenieva-Hackenberg, Elena

Publication type:

Article

iCLIP analysis of RNA substrates of the archaeal exosome.

Published in:

BMC Genomics, 2020, v. 21, n. 1, p. N.PAG, doi. 10.1186/s12864-020-07200-x

By:

Bathke, Jochen;
Gauernack, A. Susann;
Rupp, Oliver;
Weber, Lennart;
Preusser, Christian;
Lechner, Marcus;
Rossbach, Oliver;
Goesmann, Alexander;
Evguenieva-Hackenberg, Elena;
Klug, Gabriele

Publication type:

Article

The archaeal exosome core is a hexameric ring structure with three catalytic subunits.

Published in:

Nature Structural & Molecular Biology, 2005, v. 12, n. 7, p. 575, doi. 10.1038/nsmb952

By:

Lorentzen, Esben;
Walter, Pamela;
Fribourg, Sebastien;
Evguenieva-Hackenberg, Elena;
Klug, Gabriele;
Conti, Elena

Publication type:

Article

Structure and function of the archaeal exosome.

Published in:

Wiley Interdisciplinary Reviews: RNA, 2014, v. 5, n. 5, p. 623, doi. 10.1002/wrna.1234

By:

Evguenieva-Hackenberg, Elena;
Hou, Linlin;
Glaeser, Stefanie;
Klug, Gabriele

Publication type:

Article

Riboregulation in plant-associated α- proteobacteria.

Published in:

RNA Biology, 2014, v. 11, n. 5, p. 550, doi. 10.4161/rna.29625

By:

Becker, Anke;
Overlöper, Aaron;
Schlüter, Jan-Philip;
Reinkensmeier, Jan;
Robledo, Marta;
Giegerich, Robert;
Narberhaus, Franz;
Evguenieva-Hackenberg, Elena

Publication type:

Article

The archaeal DnaG protein needs Csl4 for binding to the exosome and enhances its interaction with adenine-rich RNAs.

Published in:

RNA Biology, 2013, v. 10, n. 3, p. 415, doi. 10.4161/rna.23450

By:

Linlin Hou;
Klug, Gabriele;
Evguenieva-Hackenberg, Elena

Publication type:

Article

Small RNAs of the Bradyrhizobium/Rhodopseudomonas lineage and their analysis.

Published in:

RNA Biology, 2012, v. 9, n. 1, p. 1, doi. 10.4161/rna.9.1.18008

By:

Madhugiri, Ramakanth;
Pessi, Gabriella;
Voss, Björn;
Hahn, Julia;
Sharma, Cynthia M.;
Reinhardt, Richard;
Vogel, Jörg;
Hess, Wolfgang R.;
Fischer, Hans-Martin;
Evguenieva-Hackenberg, Elena

Publication type:

Article

Subcellular localization of RNA degrading proteins and protein complexes in prokaryotes.

Published in:

RNA Biology, 2011, v. 8, n. 1, p. 49, doi. 10.4161/rna.8.1.14066

By:

Evguenieva-Hackenberg, Elena;
Roppelt, Verena;
Lassek, Christian;
Klug, Gabriele

Publication type:

Article

A ParDE toxin--antitoxin system is responsible for the maintenance of the Yersinia virulence plasmid but not for type III secretion-associated growth inhibition.

Published in:

Frontiers in Cellular & Infection Microbiology, 2023, p. 01, doi. 10.3389/fcimb.2023.1166077

By:

Schott, Saskia;
Scheuer, Robina;
Ermoli, Francesca;
Glatter, Timo;
Evguenieva-Hackenberg, Elena;
Diepold, Andreas

Publication type:

Article

One functional subunit is sufficient for catalytic activity and substrate specificity of Escherichia coli endoribonuclease III artificial heterodimers

Published in:

FEBS Letters, 2002, v. 518, n. 1-3, p. 93, doi. 10.1016/S0014-5793(02)02653-4

By:

Conrad, Christian;
Schmitt, Jens Guido;
Evguenieva-Hackenberg, Elena;
Klug, Gabriele

Publication type:

Article

Unraveling the small proteome of the plant symbiont Sinorhizobium meliloti by ribosome profiling and proteogenomics.

Published in:

MicroLife, 2023, v. 4, p. 1, doi. 10.1093/femsml/uqad012

By:

Hadjeras, Lydia;
Heiniger, Benjamin;
Maaß, Sandra;
Scheuer, Robina;
Gelhausen, Rick;
Azarderakhsh, Saina;
Barth-Weber, Susanne;
Backofen, Rolf;
Becher, Dörte;
Ahrens, Christian H;
Sharma, Cynthia M;
Evguenieva-Hackenberg, Elena

Publication type:

Article

Attack from both ends: mRNA degradation in the crenarchaeon Sulfolobus solfataricus.

Published in:

Biochemical Society Transactions, 2013, v. 41, n. 1, p. 379, doi. 10.1042/BST20120282

By:

Evguenieva-Hackenberg, Elena;
Blӓsi, Udo

Publication type:

Article

A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti.

Published in:

BMC Genomics, 2010, v. 11, p. 245, doi. 10.1186/1471-2164-11-245

By:

Schlüter, Jan-Philip;
Reinkensmeier, Jan;
Daschkey, Svenja;
Evguenieva-Hackenberg, Elena;
Janssen, Stefan;
Jänicke, Sebastian;
Becker, Jörg D;
Giegerich, Robert;
Becker, Anke

Publication type:

Article