Works by Erie, Dorothy A.

Results: 20

Interconvertible Lac RepressorDNA Loops Revealed by Single-Molecule Experiments.

Published in:

PLoS Biology, 2008, v. 6, n. 9, p. e232, doi. 10.1371/journal.pbio.0060232

By:

Oi Kwan Wong;
Guthold, Martin;
Erie, Dorothy A.;
Gelles, Jeff

Publication type:

Article

Determination of protein–DNA binding constants and specificities from statistical analyses of single molecules: MutS–DNA interactions.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 13, p. 4322, doi. 10.1093/nar/gki708

By:

Yang, Yong;
Sass, Lauryn E.;
Du, Chunwei;
Hsieh, Peggy;
Erie, Dorothy A.

Publication type:

Article

Large conformational changes in MutS during DNA scanning, mismatch recognition and repair signalling.

Published in:

EMBO Journal, 2012, v. 31, n. 11, p. 2528, doi. 10.1038/emboj.2012.95

By:

Qiu, Ruoyi;
DeRocco, Vanessa C;
Harris, Credle;
Sharma, Anushi;
Hingorani, Manju M;
Erie, Dorothy A;
Weninger, Keith R

Publication type:

Article

Regulatory control of DNA end resection by Sae2 phosphorylation.

Published in:

Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-06417-5

By:

Cannavo, Elda;
Johnson, Dominic;
Andres, Sara N.;
Kissling, Vera M.;
Reinert, Julia K.;
Garcia, Valerie;
Erie, Dorothy A.;
Hess, Daniel;
Thomä, Nicolas H.;
Enchev, Radoslav I.;
Peter, Matthias;
Williams, R. Scott;
Neale, Matt J.;
Cejka, Petr

Publication type:

Article

Large conformational changes in MutS during DNA scanning, mismatch recognition and repair signaling.

Published in:

2019

By:

Qiu, Ruoyi;
DeRocco, Vanessa C;
Harris, Credle;
Sharma, Anushi;
Hingorani, Manju M;
Erie, Dorothy A;
Weninger, Keith R

Publication type:

Correction Notice

Single-Molecule Study Reveals a Complex E. coli RNA Polymerase.

Published in:

ChemBioChem, 2001, v. 2, n. 3, p. 167, doi. 10.1002/1439-7633(20010302)2:3<167::AID-CBIC167>3.0.CO;2-S

By:

Guthold, Martin;
Erie, Dorothy A.

Publication type:

Article

Reply to: On the statistical foundation of a recent single molecule FRET benchmark.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-47734-2

By:

Götz, Markus;
Barth, Anders;
Bohr, Søren S. -R.;
Börner, Richard;
Jixin Chen;
Cordes, Thorben;
Erie, Dorothy A.;
Gebhardt, Christian;
Hadzic, Mélodie C. A. S.;
Hamilton, George L.;
Hatzakis, Nikos S.;
Hugel, Thorsten;
Kisley, Lydia;
Lamb, Don C.;
de Lannoy, Carlos;
Mahn, Chelsea;
Dunukara, Dushani;
de Ridder, Dick;
Sanabria, Hugo;
Schimpf, Julia

Publication type:

Article

Fabrication of a Biocompatible Mica/Gold Surface for Tip‐Enhanced Raman Spectroscopy.

Published in:

ChemPhysChem, 2020, v. 21, n. 3, p. 188, doi. 10.1002/cphc.201901002

By:

You, Xiao;
Casper, Clayton B.;
Lentz, Emily E.;
Erie, Dorothy A.;
Atkin, Joanna M.

Publication type:

Article

Osmolyte-induced changes in protein conformational equilibria.

Published in:

Biopolymers, 2000, v. 53, n. 4, p. 293, doi. 10.1002/(SICI)1097-0282(20000405)53:4<293::AID-BIP2>3.0.CO;2-T

By:

Saunders, Aleister J.;
Davis-Searles, Paula R.;
Allen, Devon L.;
Pielak, Gary J.;
Erie, Dorothy A.

Publication type:

Article

A Monte Carlo method for generating structures of short single-stranded DNA sequences.

Published in:

Biopolymers, 1993, v. 33, n. 1, p. 75, doi. 10.1002/bip.360330109

By:

Erie, Dorothy A.;
Breslauer, Kenneth J.;
Olson, Wilma K.

Publication type:

Article

Helix formation by hydroxyamyl- L-glutaminyl residues in water and aqueous sodium dodecyl sulfate.

Published in:

Biopolymers, 1984, v. 23, n. 8, p. 1595, doi. 10.1002/bip.360230812

By:

Overgaard, Trina;
Erie, Dorothy;
Darsey, J. A.;
Mattice, Wayne L.

Publication type:

Article

Structure, function, and inhibition of drug reactivating human gut microbial β-glucuronidases.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-018-36069-w

By:

Biernat, Kristen A.;
Pellock, Samuel J.;
Bhatt, Aadra P.;
Bivins, Marissa M.;
Walton, William G.;
Tran, Bich Ngoc T.;
Wei, Lianjie;
Snider, Michael C.;
Cesmat, Andrew P.;
Tripathy, Ashutosh;
Erie, Dorothy A.;
Redinbo, Matthew R.

Publication type:

Article

Coordinated protein and DNA conformational changes govern mismatch repair initiation by MutS.

Published in:

Nucleic Acids Research, 2018, v. 46, n. 20, p. 10782, doi. 10.1093/nar/gky865

By:

LeBlanc, Sharonda J;
Gauer, Jacob W;
Hao, Pengyu;
Case, Brandon C;
Hingorani, Manju M;
Weninger, Keith R;
Erie, Dorothy A

Publication type:

Article

Substrate preference of Gen endonucleases highlights the importance of branched structures as DNA damage repair intermediates.

Published in:

Nucleic Acids Research, 2017, v. 45, n. 9, p. 5333, doi. 10.1093/nar/gkx214

By:

Bellendir, Stephanie P.;
Rognstad, Danielle J.;
Morris, Lydia P.;
Zapotoczny, Grzegorz;
Walton, William G.;
Redinbo, Matthew R.;
Ramsden, Dale A.;
Sekelsky, Jeff;
Erie, Dorothy A.

Publication type:

Article

Linear Streptomyces plasmids form superhelical circles through interactions between their terminal proteins.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 6, p. 2165, doi. 10.1093/nar/gkq1204

By:

Tsai, Hsiu-Hui;
Huang, Chih-Hung;
Tessmer, Ingrid;
Erie, Dorothy A.;
Chen, Carton W.

Publication type:

Article

Enhanced electrostatic force microscopy reveals higher-order DNA looping mediated by the telomeric protein TRF2.

Published in:

Scientific Reports, 2016, p. 20513, doi. 10.1038/srep20513

By:

Kaur, Parminder;
Wu, Dong;
Lin, Jiangguo;
Countryman, Preston;
Bradford, Kira C.;
Erie, Dorothy A.;
Riehn, Robert;
Opresko, Patricia L.;
Wang, Hong

Publication type:

Article

Scanning Force Microscopy and Nanomangulation: Studies of Dna and Proteins Involved in Dna Repair.

Published in:

Microscopy & Microanalysis, 1999, p. 1004, doi. 10.1017/S1431927600018341

By:

Bailey, GW;
Jerome, WG;
McKernan, S;
Mansfield, JF;
Price, RL;
Erie, Dorothy;
Ratcliff, Glenn;
Guthold, Martin;
Bullock, Valerie;
Pliske, Michelle;
Superfine, Richard;
Taylor, Russell

Publication type:

Article

Hemi-methylated DNA regulates DNA methylation inheritance through allosteric activation of H3 ubiquitylation by UHRF1.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.17101

By:

Harrison, Joseph S.;
Cornett, Evan M.;
Goldfarb, Dennis;
DaRosa, Paul A.;
Li, Zimeng M.;
Feng Yan;
Dickson, Bradley M.;
Guo, Angela H.;
Cantu, Daniel V.;
Kaustov, Lilia;
Brown, Peter J.;
Arrowsmith, Cheryl H.;
Erie, Dorothy A.;
Major, Michael B.;
Klevit, Rachel E.;
Krajewski, Krzysztof;
Kuhlman, Brian;
Strahl, Brian D.;
Rothbart, Scott B.

Publication type:

Article

Evolutionary conservation of the fidelity of transcription.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-36525-w

By:

Chung, Claire;
Verheijen, Bert M.;
Navapanich, Zoe;
McGann, Eric G.;
Shemtov, Sarah;
Lai, Guan-Ju;
Arora, Payal;
Towheed, Atif;
Haroon, Suraiya;
Holczbauer, Agnes;
Chang, Sharon;
Manojlovic, Zarko;
Simpson, Stephen;
Thomas, Kelley W.;
Kaplan, Craig;
van Hasselt, Peter;
Timmers, Marc;
Erie, Dorothy;
Chen, Lin;
Gout, Jean-Franćois

Publication type:

Article

A blind benchmark of analysis tools to infer kinetic rate constants from single-molecule FRET trajectories.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-33023-3

By:

Götz, Markus;
Barth, Anders;
Bohr, Søren S.-R.;
Börner, Richard;
Chen, Jixin;
Cordes, Thorben;
Erie, Dorothy A.;
Gebhardt, Christian;
Hadzic, Mélodie C. A. S.;
Hamilton, George L.;
Hatzakis, Nikos S.;
Hugel, Thorsten;
Kisley, Lydia;
Lamb, Don C.;
de Lannoy, Carlos;
Mahn, Chelsea;
Dunukara, Dushani;
de Ridder, Dick;
Sanabria, Hugo;
Schimpf, Julia

Publication type:

Article