Works by Epstein, Charles B.

Results: 22

Empirical relation between sulphur dioxide emissions and acid deposition derived from monthly data.

Published in:

Nature, 1986, v. 323, n. 6085, p. 245, doi. 10.1038/323245a0

By:

Epstein, Charles B.;
Oppenheimer, Michael

Publication type:

Article

MAD: a suite of tools for microarray data management and processing.

Published in:

Bioinformatics, 2000, v. 16, n. 10, p. 946, doi. 10.1093/bioinformatics/16.10.946

By:

Liao, Birong;
Hale, Walker;
Epstein, Charles B.;
Butow, Ronald A.;
Garner, Harold R.

Publication type:

Article

Systematic comparison of monoclonal versus polyclonal antibodies for mapping histone modifications by ChIP-seq.

Published in:

Epigenetics & Chromatin, 2016, v. 9, p. 1, doi. 10.1186/s13072-016-0100-6

By:

Busby, Michele;
Xue, Catherine;
Li, Catherine;
Farjoun, Yossi;
Gienger, Elizabeth;
Yofe, Ido;
Gladden, Adrianne;
Epstein, Charles B.;
Cornett, Evan M.;
Rothbart, Scott B.;
Nusbaum, Chad;
Goren, Alon

Publication type:

Article

PTK6 Regulates IGF-1-Induced Anchorage-Independent Survival.

Published in:

PLoS ONE, 2010, v. 5, n. 7, p. 1, doi. 10.1371/journal.pone.0011729

By:

Irie, Hanna Y.;
Shrestha, Yashaswi;
Selfors, Laura M.;
Frye, Fabianne;
Iida, Naoko;
Zhigang Wang;
Lihua Zou;
Jun Yao;
Yiling Lu;
Epstein, Charles B.;
Natesan, Sridaran;
Richardson, Andrea L.;
Polyak, Kornelia;
Mills, Gordon B.;
Hahn, William C.;
Brugge, Joan S.

Publication type:

Article

An autoimmune transcriptional circuit drives FOXP3<sup>+</sup> regulatory T cell dysfunction.

Published in:

Science Translational Medicine, 2024, v. 16, n. 762, p. 1, doi. 10.1126/scitranslmed.adp1720

By:

Sumida, Tomokazu S.;
Lincoln, Matthew R.;
He, Liang;
Park, Yongjin;
Ota, Mineto;
Oguchi, Akiko;
Son, Raku;
Yi, Alice;
Stillwell, Helen A.;
Leissa, Greta A.;
Fujio, Keishi;
Murakawa, Yasuhiro;
Kulminski, Alexander M.;
Epstein, Charles B.;
Bernstein, Bradley E.;
Kellis, Manolis;
Hafler, David A.

Publication type:

Article

Genome wide chromatin accessibility profiling identifies chromatin signatures and novel transcription factor dependencies in multiple myeloma.

Published in:

Clinical Lymphoma, Myeloma & Leukemia, 2019, v. 19, p. e8, doi. 10.1016/j.clml.2019.09.011

By:

Szalat, Raphael;
Lawlor, Matthew;
Fulciniti, Mariateresa;
Epstein, Charles B.;
Xu, Yan;
Samur, Anil;
Lin, Charles;
Rao, Prabhal;
farrell, Nina;
Wu, Sharon;
Schwartz, Logan;
Wen, Kenneth;
Tai, Yu-Tzu;
Wang, Jinhua;
Gray, Nathanael;
Young, Rick;
Anderson, Kenneth C.;
Samur, Mehmet;
Ott, Christopher;
Munshi, Nikhil

Publication type:

Article

SIT4 regulation of Mig1p-mediated catabolite repression in Saccharomyces cerevisiae

Published in:

FEBS Letters, 2007, v. 581, n. 29, p. 5658, doi. 10.1016/j.febslet.2007.11.027

By:

Jin, Can;
Barrientos, Antoni;
Epstein, Charles B.;
Butow, Ronald A.;
Tzagoloff, Alexander

Publication type:

Article

p53 mutations isolated in yeast based on loss of transcription factor activity: similarities and differences from p53 mutations detected in human tumors.

Published in:

Oncogene, 1998, v. 16, n. 16, p. 2115, doi. 10.1038/sj.onc.1201734

By:

Epstein, Charles B;
Attiyeh, Edward F;
Hobson, David A;
Silver, Abigail L;
Broach, James R;
Levine, Arnold J

Publication type:

Article

Detecting sample swaps in diverse NGS data types using linkage disequilibrium.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-17453-5

By:

Javed, Nauman;
Farjoun, Yossi;
Fennell, Tim J.;
Epstein, Charles B.;
Bernstein, Bradley E.;
Shoresh, Noam

Publication type:

Article

RTG‐dependent mitochondria to nucleus signaling is negatively regulated by the seven WD‐repeat protein Lst8p.

Published in:

EMBO Journal, 2001, v. 20, n. 24, p. 7209, doi. 10.1093/emboj/20.24.7209

By:

Liu, Zhengchang;
Sekito, Takayuki;
Epstein, Charles B.;
Butow, Ronald A.

Publication type:

Article

RTG-dependent mitochondria to nucleus signaling is negatively regulated by the seven WD-repeat protein Lst8p.

Published in:

EMBO Journal, 2001, v. 20, n. 24, p. 7209, doi. 10.1093/emboj/20.24.7209

By:

Zhengchang Liu;
Sekito, Takayuki;
Epstein, Charles B.;
Butow, Ronald A.

Publication type:

Article

Recommendations for the design and analysis of epigenome-wide association studies.

Published in:

Nature Methods, 2013, v. 10, n. 10, p. 949, doi. 10.1038/nmeth.2632

By:

Michels, Karin B;
Binder, Alexandra M;
Dedeurwaerder, Sarah;
Epstein, Charles B;
Greally, John M;
Gut, Ivo;
Houseman, E Andres;
Izzi, Benedetta;
Kelsey, Karl T;
Meissner, Alexander;
Milosavljevic, Aleksandar;
Siegmund, Kimberly D;
Bock, Christoph;
Irizarry, Rafael A

Publication type:

Article

The Spectrum of Mutations at the p53 Locus.

Published in:

Annals of the New York Academy of Sciences, 1995, v. 768, n. 1, p. 111, doi. 10.1111/j.1749-6632.1995.tb12115.x

By:

LEVINE, ARNOLD J.;
WU, MICHAEL C.;
CHANG, ANWELL;
SILVER, ABIGAIL;
ATTIYEH, EDWARD F.;
LIN, JIAYUH;
EPSTEIN, CHARLES B.

Publication type:

Article

Identification of partial loss of function p53 gene mutations utilizing a yeast-based functional assay.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 5, p. e28, doi. 10.1093/nar/29.5.e28

By:

Kovvali, Gopala K.;
Mehta, Bena;
Epstein, Charles B.;
Lutzker, Stuart G.

Publication type:

Article

Epigenetic profiling reveals key genes and cis-regulatory networks specific to human parathyroids.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-46181-3

By:

Jung, Youngsook Lucy;
Zhao, Wenping;
Li, Ian;
Jain, Dhawal;
Epstein, Charles B.;
Bernstein, Bradley E.;
Parangi, Sareh;
Sherwood, Richard;
Robinson-Cohen, Cassianne;
Hsu, Yi-Hsiang;
Park, Peter J.;
Mannstadt, Michael

Publication type:

Article

Genetic and epigenetic fine mapping of causal autoimmune disease variants.

Published in:

Nature, 2015, v. 518, n. 7539, p. 337, doi. 10.1038/nature13835

By:

Farh, Kyle Kai-How;
Marson, Alexander;
Zhu, Jiang;
Kleinewietfeld, Markus;
Housley, William J.;
Beik, Samantha;
Shoresh, Noam;
Whitton, Holly;
Ryan, Russell J. H.;
Shishkin, Alexander A.;
Hatan, Meital;
Carrasco-Alfonso, Marlene J.;
Mayer, Dita;
Luckey, C. John;
Patsopoulos, Nikolaos A.;
De Jager, Philip L.;
Kuchroo, Vijay K.;
Epstein, Charles B.;
Daly, Mark J.;
Hafler, David A.

Publication type:

Article

An integrated encyclopedia of DNA elements in the human genome.

Published in:

Nature, 2012, v. 489, n. 7414, p. 57, doi. 10.1038/nature11247

By:

Dunham, Ian;
Kundaje, Anshul;
Aldred, Shelley F.;
Collins, Patrick J.;
Davis, Carrie A.;
Doyle, Francis;
Epstein, Charles B.;
Frietze, Seth;
Harrow, Jennifer;
Kaul, Rajinder;
Khatun, Jainab;
Lajoie, Bryan R.;
Landt, Stephen G.;
Lee, Bum-Kyu;
Pauli, Florencia;
Rosenbloom, Kate R.;
Sabo, Peter;
Safi, Alexias;
Sanyal, Amartya;
Shoresh, Noam

Publication type:

Article

Mapping and analysis of chromatin state dynamics in nine human cell types.

Published in:

Nature, 2011, v. 473, n. 7345, p. 43, doi. 10.1038/nature09906

By:

Ernst, Jason;
Kheradpour, Pouya;
Mikkelsen, Tarjei S.;
Shoresh, Noam;
Ward, Lucas D.;
Epstein, Charles B.;
Zhang, Xiaolan;
Wang, Li;
Issner, Robbyn;
Coyne, Michael;
Ku, Manching;
Durham, Timothy;
Kellis, Manolis;
Bernstein, Bradley E.

Publication type:

Article

Identification of nuclear hormone receptor pathways causing insulin resistance by transcriptional and epigenomic analysis.

Published in:

Nature Cell Biology, 2015, v. 17, n. 1, p. 44, doi. 10.1038/ncb3080

By:

Kang, Sona;
Tsai, Linus T.;
Zhou, Yiming;
Evertts, Adam;
Xu, Su;
Griffin, Michael J.;
Issner, Robbyn;
Whitton, Holly J.;
Garcia, Benjamin A.;
Epstein, Charles B.;
Mikkelsen, Tarjei S.;
Rosen, Evan D.

Publication type:

Article

Impact of sequencing depth in ChIP-seq experiments.

Published in:

Nucleic Acids Research, 2015, v. 43, n. 9, p. 1, doi. 10.1093/nar/gku178

By:

Youngsook L. Jung;
Luquette, Lovelace J.;
Ho, Joshua W. K.;
Ferrari, Francesco;
Tolstorukov, Michael;
Aki Minoda;
Issner, Robbyn;
Epstein, Charles B.;
Karpen, Gary H.;
Kuroda, Mitzi I.;
Park, Peter J.

Publication type:

Article

Impact of sequencing depth in ChIP-seq experiments.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 9, p. e74, doi. 10.1093/nar/gku178

By:

Jung, Youngsook L.;
Luquette, Lovelace J.;
Ho, Joshua W.K.;
Ferrari, Francesco;
Tolstorukov, Michael;
Minoda, Aki;
Issner, Robbyn;
Epstein, Charles B.;
Karpen, Gary H.;
Kuroda, Mitzi I.;
Park, Peter J.

Publication type:

Article

Genomic Distribution and Inter-Sample Variation of Non-CpG Methylation across Human Cell Types.

Published in:

PLoS Genetics, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.pgen.1002389

By:

Ziller, Michael J.;
Müller, Fabian;
Jing Liao;
Yingying Zhang;
Hongcang Gu;
Bock, Christoph;
Boyle, Patrick;
Epstein, Charles B.;
Bernstein, Bradley E.;
Lengauer, Thomas;
Gnirke, Andreas;
Meissner, Alexander

Publication type:

Article