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TM or not TM: transmembrane protein prediction with low false positive rate using DAS-TMfilter.
- Published in:
- Bioinformatics, 2004, v. 20, n. 1, p. 136, doi. 10.1093/bioinformatics/btg394
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- Publication type:
- Article
Taxonomy workbench.
- Published in:
- Bioinformatics, 2001, v. 17, n. 12, p. 1179, doi. 10.1093/bioinformatics/17.12.1179
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- Publication type:
- Article
valuation of human‐readable annotation in biomolecular sequence databases with biological rule libraries.
- Published in:
- Bioinformatics, 1999, v. 15, n. 7, p. 528, doi. 10.1093/bioinformatics/15.7.528
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- Publication type:
- Article
Iron Supplementation Delays Aging and Extends Cellular Lifespan through Potentiation of Mitochondrial Function.
- Published in:
- Cells (2073-4409), 2022, v. 11, n. 5, p. 862, doi. 10.3390/cells11050862
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- Publication type:
- Article
International Conference on Genome Informatics (GIW 2013) in Singapore: introduction to the systems biology contributions.
- Published in:
- BMC Systems Biology, 2013, v. 7, p. 1, doi. 10.1186/1752-0509-7-S6-I1
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- Publication type:
- Article
International Conference on Genome Informatics (GIW 2013) in Singapore: introduction to the systems biology contributions.
- Published in:
- 2013
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- Publication type:
- Proceeding
PICLS with human cells is the first high throughput screening method for identifying novel compounds that extend lifespan.
- Published in:
- Biology Direct, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13062-024-00455-4
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- Publication type:
- Article
Reconstruction of gene association network reveals a transmembrane protein required for adipogenesis and targeted by PPARγ.
- Published in:
- Cellular & Molecular Life Sciences, 2010, v. 67, n. 23, p. 4049, doi. 10.1007/s00018-010-0424-5
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- Publication type:
- Article
Novel SNP improves differential survivability and mortality in non-small cell lung cancer patients.
- Published in:
- BMC Genomics, 2014, v. 15, p. 1, doi. 10.1186/1471-2164-15-S9-S20
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- Publication type:
- Article
Molecular mechanism of the Escherichia coli AhpC in the function of a chaperone under heat-shock conditions.
- Published in:
- Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-32527-7
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- Publication type:
- Article
Potential Human Adaptation Mutation of Influenza A(H5N1) Virus, Canada.
- Published in:
- Emerging Infectious Diseases, 2014, v. 20, n. 9, p. 1580, doi. 10.3201/eid2009.140240
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- Publication type:
- Article
Correction: Cserző et al. The First Quarter Century of the Dense Alignment Surface Transmembrane Prediction Method. Int. J. Mol. Sci. 2023 , 24 , 14016.
- Published in:
- 2024
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- Publication type:
- Correction Notice
The First Quarter Century of the Dense Alignment Surface Transmembrane Prediction Method.
- Published in:
- International Journal of Molecular Sciences, 2023, v. 24, n. 18, p. 14016, doi. 10.3390/ijms241814016
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- Publication type:
- Article
Parameterization of disorder predictors for large-scale applications requiring high specificity by using an extended benchmark dataset.
- Published in:
- BMC Genomics, 2010, v. 11, p. 1, doi. 10.1186/1471-2164-11-S1-S15
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- Publication type:
- Article
Reducing the haystack to find the needle: improved protein identification after fast elimination of non-interpretable peptide MS/MS spectra and noise reduction.
- Published in:
- BMC Genomics, 2010, v. 11, p. 1, doi. 10.1186/1471-2164-11-S1-S13
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- Publication type:
- Article
Extending Asia Pacific bioinformatics into new realms in the "-omics" era.
- Published in:
- 2009
- By:
- Publication type:
- Proceeding
Genome-wide loss-of-function analysis of deubiquitylating enzymesfor zebrafish development.
- Published in:
- BMC Genomics, 2009, v. 10, p. 637, doi. 10.1186/1471-2164-10-637
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- Publication type:
- Article
On the necessity of dissecting sequence similarity scores into segment-specific contributions for inferring protein homology, function prediction and annotation.
- Published in:
- BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-166
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- Publication type:
- Article
Darkness in the Human Gene and Protein Function Space: Widely Modest or Absent Illumination by the Life Science Literature and the Trend for Fewer Protein Function Discoveries Since 2000.
- Published in:
- Proteomics, 2018, v. 18, n. 21/22, p. N.PAG, doi. 10.1002/pmic.201800093
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- Publication type:
- Article
The Geographic Variation of Surveillance and Zoonotic Spillover Potential of Influenza Viruses in Domestic Poultry and Swine.
- Published in:
- Open Forum Infectious Diseases, 2018, v. 5, n. 12, p. N.PAG, doi. 10.1093/ofid/ofy318
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- Publication type:
- Article
From a heap of facts to predictive biological theory: the future of life sciences viewed through the prism of a bioinformatics textbook.
- Published in:
- 2008
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- Publication type:
- Book Review
Can molecular mechanisms of biological processes be extracted from expression profiles? Case study: endothelial contribution to humor-induced angiogenesis.
- Published in:
- 2001
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- Publication type:
- Case Study
Synthesizing non-natural parts from natural genomic template.
- Published in:
- Journal of Biological Engineering, 2009, v. 3, p. 1, doi. 10.1186/1754-1611-3-2
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- Publication type:
- Article
Did the early full genome sequencing of yeast boost gene function discovery?
- Published in:
- Biology Direct, 2023, v. 18, n. 1, p. 1, doi. 10.1186/s13062-023-00403-8
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- Publication type:
- Article
About the dark corners in the gene function space of Escherichia coli remaining without illumination by scientific literature.
- Published in:
- Biology Direct, 2023, v. 18, n. 1, p. 1, doi. 10.1186/s13062-023-00362-0
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- Publication type:
- Article
Conserved sequence motifs in human TMTC1, TMTC2, TMTC3, and TMTC4, new O-mannosyltransferases from the GT-C/PMT clan, are rationalized as ligand binding sites.
- Published in:
- Biology Direct, 2021, v. 16, n. 1, p. 1, doi. 10.1186/s13062-021-00291-w
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- Publication type:
- Article
Structural modelling of the lumenal domain of human GPAA1, the metallo-peptide synthetase subunit of the transamidase complex, reveals zinc-binding mode and two flaps surrounding the active site.
- Published in:
- Biology Direct, 2020, v. 15, n. 1, p. N.PAG, doi. 10.1186/s13062-020-00266-3
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- Publication type:
- Article
Finite-size effects in transcript sequencing count distribution: its power-law correction necessarily precedes downstream normalization and comparative analysis.
- Published in:
- Biology Direct, 2018, v. 13, p. 1, doi. 10.1186/s13062-018-0204-y
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- Publication type:
- Article
xHMMER3x2: Utilizing HMMER3's speed and HMMER2's sensitivity and specificity in the glocal alignment mode for improved large-scale protein domain annotation.
- Published in:
- Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0163-0
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- Publication type:
- Article
IPC - Isoelectric Point Calculator.
- Published in:
- Biology Direct, 2016, v. 11, p. 1, doi. 10.1186/s13062-016-0159-9
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- Publication type:
- Article
A CH domain-containing N terminus in NuMA?
- Published in:
- Protein Science: A Publication of the Protein Society, 2002, v. 11, n. 10, p. 2281, doi. 10.1110/ps.0221002
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- Publication type:
- Article
Discovering novel SNPs that are correlated with patient outcome in a Singaporean cancer patient cohort treated with gemcitabine-based chemotherapy.
- Published in:
- 2018
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- Publication type:
- journal article
HPMV: Human protein mutation viewer - relating sequence mutations to protein sequence architecture and function changes.
- Published in:
- Journal of Bioinformatics & Computational Biology, 2015, v. 13, n. 5, p. -1, doi. 10.1142/S0219720015500286
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- Publication type:
- Article
Unix interfaces, Kleisli, bucandin structure, etc. - The heroic beginning of bioinformatics in Singapore.
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- Journal of Bioinformatics & Computational Biology, 2014, v. 12, n. 3, p. 1471002-1, doi. 10.1142/S0219720014710024
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- Publication type:
- Article
10 years for the Journal of Bioinformatics and Computational Biology (2003-2013) - A retrospective.
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- Journal of Bioinformatics & Computational Biology, 2014, v. 12, n. 3, p. 1471001-1, doi. 10.1142/S0219720014710012
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- Publication type:
- Article
AUTOMATIC PHYLOGENETIC CLASSIFICATION OF BACTERIAL BETA-LACTAMASE SEQUENCES INCLUDING STRUCTURAL AND ANTIBIOTIC SUBSTRATE PREFERENCE INFORMATION.
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- Journal of Bioinformatics & Computational Biology, 2013, v. 11, n. 6, p. 1, doi. 10.1142/S0219720013430117
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- Publication type:
- Article
A SIMPLE SHORTCUT TO UNSUPERVISED ALIGNMENT-FREE PHYLOGENETIC GENOME GROUPINGS, EVEN FROM UNASSEMBLED SEQUENCING READS.
- Published in:
- Journal of Bioinformatics & Computational Biology, 2013, v. 11, n. 6, p. 1, doi. 10.1142/S0219720013430051
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- Publication type:
- Article
THE 24TH INTERNATIONAL CONFERENCE ON GENOME INFORMATICS, GIW2013, IN SINGAPORE.
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- Journal of Bioinformatics & Computational Biology, 2013, v. 11, n. 6, p. 1, doi. 10.1142/S0219720013020034
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- Publication type:
- Article
MOTIF DISCOVERY WITH DATA MINING IN 3D PROTEIN STRUCTURE DATABASES: DISCOVERY, VALIDATION AND PREDICTION OF THE U-SHAPE ZINC BINDING ("HUF-ZINC") MOTIF.
- Published in:
- Journal of Bioinformatics & Computational Biology, 2013, v. 11, n. 1, p. -1, doi. 10.1142/S0219720013400088
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- Publication type:
- Article
BEWARE OF MOVING TARGETS: REFERENCE PROTEOME CONTENT FLUCTUATES SUBSTANTIALLY OVER THE YEARS.
- Published in:
- Journal of Bioinformatics & Computational Biology, 2012, v. 10, n. 6, p. -1, doi. 10.1142/S0219720012500205
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- Publication type:
- Article
A DECADE AFTER THE FIRST FULL HUMAN GENOME SEQUENCING: WHEN WILL WE UNDERSTAND OUR OWN GENOME?
- Published in:
- Journal of Bioinformatics & Computational Biology, 2012, v. 10, n. 5, p. -1, doi. 10.1142/S0219720012710011
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- Publication type:
- Article
THE JANUS-FACED E-VALUES OF HMMER2:: EXTREME VALUE DISTRIBUTION OR LOGISTIC FUNCTION?
- Published in:
- Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 1, p. 179, doi. 10.1142/S0219720011005264
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- Publication type:
- Article
IS LGI2 THE CANDIDATE GENE FOR PARTIAL EPILEPSY WITH PERICENTRAL SPIKES?
- Published in:
- Journal of Bioinformatics & Computational Biology, 2010, v. 8, n. 1, p. 117, doi. 10.1142/S0219720010004550
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- Publication type:
- Article
Post-translational Regulation of Radioactive Iodine Therapy Response in Papillary Thyroid Carcinoma.
- Published in:
- 2017
- By:
- Publication type:
- journal article
On filtering false positive transmembrane protein predictions.
- Published in:
- Protein Engineering, 2002, v. 15, n. 9, p. 745, doi. 10.1093/protein/15.9.745
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- Publication type:
- Article
Post-translational GPI lipid anchor modification of proteins in kingdoms of life: analysis of protein sequence data from complete genomes.
- Published in:
- Protein Engineering, 2001, v. 14, n. 1, p. 17, doi. 10.1093/protein/14.1.17
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- Publication type:
- Article
PSIC: profile extraction from sequence alignments with position-specific counts of independent observations.
- Published in:
- Protein Engineering, 1999, v. 12, n. 5, p. 387, doi. 10.1093/protein/12.5.387
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- Publication type:
- Article
Hydrophobic regions on protein surfaces: definition based on hydration shell structure and a quick method for their computation.
- Published in:
- Protein Engineering, 1996, v. 9, n. 12, p. 1121, doi. 10.1093/protein/9.12.1121
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- Publication type:
- Article
Application of a sensitive collection heuristic for very large protein families: Evolutionary relationship between adipose triglyceride lipase (ATGL) and classic mammalian lipases.
- Published in:
- BMC Bioinformatics, 2006, v. 7, p. 164, doi. 10.1186/1471-2105-7-164
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- Publication type:
- Article
Proteins with two SUMO-like domains in chromatin-associated complexes: The RENi (Rad60-Esc2-NIP45) family.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 22, doi. 10.1186/1471-2105-6-22
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- Publication type:
- Article