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Directed acyclic graph for epidemiological studies in childhood food allergy: Construction, user's guide, and application.
- Published in:
- Allergy, 2024, v. 79, n. 8, p. 2051, doi. 10.1111/all.16025
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- Article
Pharmacological Improvement of Cystic Fibrosis Transmembrane Conductance Regulator Function Rescues Airway Epithelial Homeostasis and Host Defense in Children with Cystic Fibrosis.
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- American Journal of Respiratory & Critical Care Medicine, 2024, v. 209, n. 11, p. 1338, doi. 10.1164/rccm.202310-1836OC
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- Article
Die Medizininformatik-Initiative im Überblick – Aufbau einer Gesundheitsforschungsdateninfrastruktur in Deutschland.
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- Bundesgesundheitsblatt - Gesundheitsforschung - Gesundheitsschutz, 2024, v. 67, n. 6, p. 616, doi. 10.1007/s00103-024-03887-5
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- Article
Medical history predicts phenome-wide disease onset and enables the rapid response to emerging health threats.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-48568-8
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- Article
Immune–epithelial cell cross‐talk enhances antiviral responsiveness to SARS‐CoV‐2 in children.
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- EMBO Reports, 2023, v. 24, n. 12, p. 1, doi. 10.15252/embr.202357912
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- Article
Transcriptomics-inferred dynamics of SARS-CoV-2 interactions with host epithelial cells.
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- Science Signaling, 2023, v. 16, n. 804, p. 1, doi. 10.1126/scisignal.abl8266
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- Article
Single‐cell biology: what does the future hold?
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- Molecular Systems Biology, 2023, v. 19, n. 7, p. 1, doi. 10.15252/msb.202311799
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- Article
Patient-specific modeling of stroma-mediated chemoresistance of pancreatic cancer using a three-dimensional organoid-fibroblast co-culture system.
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- Journal of Experimental & Clinical Cancer Research (17569966), 2022, v. 41, n. 1, p. 1, doi. 10.1186/s13046-022-02519-7
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- Article
Single Cell Analysis of Cultivated Fibroblasts from Chronic Pancreatitis and Pancreatic Cancer Patients.
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- Cells (2073-4409), 2022, v. 11, n. 16, p. 2583, doi. 10.3390/cells11162583
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- Article
ELF5 is a potential respiratory epithelial cell-specific risk gene for severe COVID-19.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-31999-6
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- Article
A targetable 'rogue' neutrophil-subset, [CD11b+DEspR+] immunotype, is associated with severity and mortality in acute respiratory distress syndrome (ARDS) and COVID-19-ARDS.
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- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-09343-1
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- Article
SSAM-lite: A Light-Weight Web App for Rapid Analysis of Spatially Resolved Transcriptomics Data.
- Published in:
- Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.785877
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- Article
Age-Related Differences in Structure and Function of Nasal Epithelial Cultures From Healthy Children and Elderly People.
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- Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.822437
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- Article
Knowledge bases and software support for variant interpretation in precision oncology.
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- Briefings in Bioinformatics, 2021, v. 22, n. 6, p. 1, doi. 10.1093/bib/bbab134
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- Article
Knowledge bases and software support for variant interpretation in precision oncology.
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- Briefings in Bioinformatics, 2021, v. 22, n. 6, p. 1, doi. 10.1093/bib/bbab134
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- Publication type:
- Article
Single-cell analysis of patient-derived PDAC organoids reveals cell state heterogeneity and a conserved developmental hierarchy.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-26059-4
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- Article
Cell segmentation-free inference of cell types from in situ transcriptomics data.
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- Nature Communications, 2021, v. 12, p. 1, doi. 10.1038/s41467-021-23807-4
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- Article
Cell segmentation-free inference of cell types from in situ transcriptomics data.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-23807-4
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- Article
Author Correction: Cell segmentation-free inference of cell types from in situ transcriptomics data.
- Published in:
- 2021
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- Publication type:
- Correction Notice
Cell segmentation-free inference of cell types from in situ transcriptomics data.
- Published in:
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-23807-4
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- Publication type:
- Article
Prospective multicentric validation of a novel prediction model for paroxysmal atrial fibrillation.
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- Clinical Research in Cardiology, 2021, v. 110, n. 6, p. 868, doi. 10.1007/s00392-020-01773-z
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- Article
Integrative Ranking of Enhancer Networks Facilitates the Discovery of Epigenetic Markers in Cancer.
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- Frontiers in Genetics, 2021, v. 11, p. 1, doi. 10.3389/fgene.2021.664654
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- Article
Transformation of microbiology data into a standardised data representation using OpenEHR.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-89796-y
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- Publication type:
- Article
Hyperinflammation as underlying mechanism predisposing patients with cardiovascular diseases for severe COVID-19.
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- European Heart Journal, 2021, v. 42, n. 18, p. 1720, doi. 10.1093/eurheartj/ehab191
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- Article
Analysis of mutational signatures with yet another package for signature analysis.
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- Genes, Chromosomes & Cancer, 2021, v. 60, n. 5, p. 314, doi. 10.1002/gcc.22918
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- Article
Optogenetic control of Neisseria meningitidis Cas9 genome editing using an engineered, light-switchable anti-CRISPR protein.
- Published in:
- Nucleic Acids Research, 2021, v. 49, n. 5, p. e29, doi. 10.1093/nar/gkaa1198
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- Article
Functional States in Tumor-Initiating Cell Differentiation in Human Colorectal Cancer.
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- Cancers, 2021, v. 13, n. 5, p. 1097, doi. 10.3390/cancers13051097
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- Article
Putative second hit rare genetic variants in families with seemingly GBA-associated Parkinson's disease.
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- NPJ Genomic Medicine, 2021, v. 6, n. 1, p. 1, doi. 10.1038/s41525-020-00163-8
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- Article
Glioblastoma epigenome profiling identifies SOX10 as a master regulator of molecular tumour subtype.
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- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-20225-w
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- Article
Transcriptome profiling reveals Silibinin dose-dependent response network in nonsmall lung cancer cells.
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- PeerJ, 2020, p. 1, doi. 10.7717/peerj.10373
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- Article
Framework for quality assessment of whole genome cancer sequences.
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- Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-18688-y
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- Article
Modeling glioblastoma invasion using human brain organoids and single-cell transcriptomics.
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- Neuro-Oncology, 2020, v. 22, n. 8, p. 1138, doi. 10.1093/neuonc/noaa091
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- Article
SARS‐CoV‐2 receptor ACE2 and TMPRSS2 are primarily expressed in bronchial transient secretory cells.
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- EMBO Journal, 2020, v. 39, n. 10, p. 1, doi. 10.15252/embj.20105114
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- Article
Genomic footprints of activated telomere maintenance mechanisms in cancer.
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- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-019-13824-9
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- Article
Follicular T helper cells shape the HCV-specific CD4+ T cell repertoire after virus elimination.
- Published in:
- 2020
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- Publication type:
- journal article
ShinyButchR: Interactive NMF-based decomposition workflow of genome-scale datasets.
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- Biology Methods & Protocols, 2020, v. 5, n. 1, p. 1, doi. 10.1093/biomethods/bpaa022
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- Article
Longitudinal trends of serum IgE and IL5RA expression throughout childhood are associated with asthma but not with persistent wheeze.
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- Allergy, 2019, v. 74, n. 10, p. 2002, doi. 10.1111/all.13837
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- Article
Segregation and potential functional impact of a rare stop-gain PABPC4L variant in familial atypical Parkinsonism.
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- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-50102-6
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- Article
Pheno-seq – linking visual features and gene expression in 3D cell culture systems.
- Published in:
- Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-48771-4
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- Publication type:
- Article
Cell-specific CRISPR–Cas9 activation by microRNA-dependent expression of anti-CRISPR proteins.
- Published in:
- Nucleic Acids Research, 2019, v. 47, n. 13, p. 1, doi. 10.1093/nar/gkz271
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- Article
Impact of cancer mutational signatures on transcription factor motifs in the human genome.
- Published in:
- BMC Medical Genomics, 2019, v. 12, n. 1, p. 1, doi. 10.1186/s12920-019-0525-4
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- Publication type:
- Article
Enhancer hijacking activates oncogenic transcription factor NR4A3 in acinic cell carcinomas of the salivary glands.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-018-08069-x
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- Publication type:
- Article
Web-based design and analysis tools for CRISPR base editing.
- Published in:
- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2585-4
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- Publication type:
- Article
Single-Fluorescent Protein Reporters Allow Parallel Quantification of Natural Killer Cell-Mediated Granzyme and Caspase Activities in Single Target Cells.
- Published in:
- Frontiers in Immunology, 2018, p. N.PAG, doi. 10.3389/fimmu.2018.01840
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- Article
Familial Cancer Variant Prioritization Pipeline version 2 (FCVPPv2) applied to a papillary thyroid cancer family.
- Published in:
- Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-29952-z
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- Publication type:
- Article
Unraveling mitotic protein networks by 3D multiplexed epitope drug screening.
- Published in:
- Molecular Systems Biology, 2018, v. 14, n. 8, p. 1, doi. 10.15252/msb.20188238
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- Publication type:
- Article
EnrichedHeatmap: an R/Bioconductor package for comprehensive visualization of genomic signal associations.
- Published in:
- BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-4625-x
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- Publication type:
- Article
Transcription factors, coregulators, and epigenetic marks are linearly correlated and highly redundant.
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- PLoS ONE, 2017, v. 12, n. 12, p. 1, doi. 10.1371/journal.pone.0186324
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- Article
The Human Cell Atlas.
- Published in:
- eLife, 2017, p. 1, doi. 10.7554/eLife.27041
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- Publication type:
- Article
Screening drug effects in patient-derived cancer cells links organoid responses to genome alterations.
- Published in:
- Molecular Systems Biology, 2017, v. 13, n. 11, p. 1, doi. 10.15252/msb.20177697
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- Publication type:
- Article