Works by Ehrlich, Dusko S.
Results: 75
Evaluation of an Adapted Semi-Automated DNA Extraction for Human Salivary Shotgun Metagenomics.
- Published in:
- Biomolecules (2218-273X), 2023, v. 13, n. 10, p. 1505, doi. 10.3390/biom13101505
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- Article
Comparative Metagenomics Revealed Commonly Enriched Gene Sets in Human Gut Microbiomes.
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- DNA Research, 2007, v. 14, n. 4, p. 169, doi. 10.1093/dnares/dsm018
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- Article
Sequence Analysis of the Bacillus subtilis 168 Chromosome Region between the sspC and odhA Loci (184°-180°).
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- DNA Research, 1998, v. 5, n. 3, p. 195, doi. 10.1093/dnares/5.3.195
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- Article
Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilus.
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- Nature Biotechnology, 2004, v. 22, n. 12, p. 1554, doi. 10.1038/nbt1034
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- Article
Replication fork collapse at replication terminator sequences.
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- EMBO Journal, 2002, v. 21, n. 14, p. 3898, doi. 10.1093/emboj/cdf369
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- Article
Replication slippage involves DNA polymerase pausing and dissociation.
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- EMBO Journal, 2001, v. 20, n. 10, p. 2587, doi. 10.1093/emboj/20.10.2587
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- Article
Impairment of lagging strand synthesis triggers the formation of a RuvABC substrate at replication forks.
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- EMBO Journal, 2001, v. 20, n. 3, p. 619, doi. 10.1093/emboj/20.3.619
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- Article
Deletions at stalled replication forks occur by two different pathways.
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- EMBO Journal, 1997, v. 16, n. 11, p. 3332, doi. 10.1093/emboj/16.11.3332
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- Article
DNA double-strand breaks caused by replication arrest.
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- EMBO Journal, 1997, v. 16, n. 2, p. 430, doi. 10.1093/emboj/16.2.430
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- Article
Metagenomic species profiling using universal phylogenetic marker genes.
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- Nature Methods, 2013, v. 10, n. 12, p. 1196, doi. 10.1038/nmeth.2693
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- Article
A computational framework to integrate high-throughput ‘-omics’ datasets for the identification of potential mechanistic links.
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- Nature Protocols, 2018, v. 13, n. 12, p. 2781, doi. 10.1038/s41596-018-0064-z
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- Article
Qin et al. reply.
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- Nature, 2015, v. 525, n. 7569, p. E2, doi. 10.1038/nature14852
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- Article
MSPminer: abundance-based reconstitution of microbial pan-genomes from shotgun metagenomic data.
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- Bioinformatics, 2019, v. 35, n. 9, p. 1544, doi. 10.1093/bioinformatics/bty830
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- Article
Anticipating chromosomal replication fork arrest: SSB targets repair DNA helicases to active forks.
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- EMBO Journal, 2007, v. 26, n. 19, p. 4239, doi. 10.1038/sj.emboj.7601848
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- Article
Quality control of microbiota metagenomics by k-mer analysis.
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- BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1406-7
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- Article
Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains.
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- PLoS Biology, 2014, v. 12, n. 8, p. 1, doi. 10.1371/journal.pbio.1001920
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- Article
Changes of the human gut microbiome induced by a fermented milk product.
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- Scientific Reports, 2014, p. 1, doi. 10.1038/srep06328
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- Article
Effect of Genome and Environment on Metabolic and Inflammatory Profiles.
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- PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0120898
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- Article
Extensive horizontal transfer of core genome genes between two Lactobacillus species found in the gastrointestinal tract.
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- BMC Evolutionary Biology, 2007, v. 7, p. 1, doi. 10.1186/1471-2148-7-141
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- Article
Identification of stress-inducible proteins in Lactobacillus delbrueckii subsp. bulgaricus.
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- Electrophoresis, 2000, v. 21, n. 12, p. 2557, doi. 10.1002/1522-2683(20000701)21:12<2557::AID-ELPS2557>3.0.CO;2-B
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- Article
Conjugated C-6 hydroxylated bile acids in serum relate to human metabolic health and gut Clostridia species.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-91482-y
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- Article
Genetic structure and transcriptional analysis of the arginine deiminase (ADI) cluster in Lactococcus lactis MG1363.
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- Canadian Journal of Microbiology, 2006, v. 52, n. 7, p. 617, doi. 10.1139/W06-009
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- Article
Probiotics – little evidence for a link to obesity.
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- 2009
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- Letter
Tongue Coating and the Salivary Microbial Communities Vary in Children with Halitosis.
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- Scientific Reports, 2016, p. 24481, doi. 10.1038/srep24481
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- Article
Restart of DNA replication in Gram-positive bacteria: functional characterisation of the Bacillus subtilis PriA initiator.
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- Nucleic Acids Research, 2002, v. 30, n. 7, p. 1593, doi. 10.1093/nar/30.7.1593
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- Article
Mining Bacillus subtilis chromosome heterogeneities using hidden Markov models.
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- Nucleic Acids Research, 2002, v. 30, n. 6, p. 1418, doi. 10.1093/nar/30.6.1418
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- Article
Analysis of six prophages in Lactococcus lactis IL1403: different genetic structure of temperate and virulent phage populations.
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- Nucleic Acids Research, 2001, v. 29, n. 3, p. 644, doi. 10.1093/nar/29.3.644
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- Article
The NAD-dependent ligase encoded by yerG is an essential gene of Bacillus subtilis.
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- Nucleic Acids Research, 2000, v. 28, n. 23, p. 4642, doi. 10.1093/nar/28.23.4642
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- Article
Efficient gene targeted random mutagenesis in genetically stable Escherichia coli strains.
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- Nucleic Acids Research, 2000, v. 28, n. 21, p. e95, doi. 10.1093/nar/28.21.e95
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- Article
In Vivo Analysis of the Plasmid pAMβ1 Resolution System.
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- Nucleic Acids Research, 1996, v. 24, n. 17, p. 3431, doi. 10.1093/nar/24.17.3431
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- Article
Capturing the most wanted taxa through cross-sample correlations.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2016, v. 10, n. 10, p. 2459, doi. 10.1038/ismej.2016.35
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- Article
Building the repertoire of dispensable chromosome regions in Bacillus subtilis entails major refinement of cognate large-scale metabolic model.
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- Nucleic Acids Research, 2013, v. 41, n. 1, p. 687, doi. 10.1093/nar/gks963
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- Article
Activation of mRNA translation by phage protein and low temperature: the case of Lactococcus lactis abortive infection system AbiD1.
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- BMC Molecular Biology, 2009, v. 10, p. 1, doi. 10.1186/1471-2199-10-4
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- Article
DNA polymerase I acts in translesion synthesis mediated by the Y-polymerases in Bacillus subtilis.
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- Molecular Microbiology, 2005, v. 57, n. 3, p. 678, doi. 10.1111/j.1365-2958.2005.04725.x
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- Article
Functional interplay between theBacillus subtilisDnaD and DnaB proteins essential for initiation and re-initiation of DNA replication.
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- Molecular Microbiology, 2005, v. 55, n. 4, p. 1138, doi. 10.1111/j.1365-2958.2004.04451.x
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- Article
Distinctive genetic features exhibited by the Y-family DNA polymerases inBacillus subtilis.
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- Molecular Microbiology, 2004, v. 54, n. 2, p. 439, doi. 10.1111/j.1365-2958.2004.04259.x
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- Article
Requirement for RecFOR-mediated recombination in priA mutant.
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- Molecular Microbiology, 2004, v. 52, n. 2, p. 551, doi. 10.1111/j.1365-2958.2004.03997.x
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- Article
The bacterial condensin/cohesin-like protein complex acts in DNA repair and regulation of gene expression.
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- Molecular Microbiology, 2004, v. 51, n. 6, p. 1629, doi. 10.1111/j.1365-2958.2003.03951.x
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- Article
Lethality of bypass polymerases in Escherichia coli cells with a defective clamp loader complex of DNA polymerase III.
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- Molecular Microbiology, 2003, v. 50, n. 1, p. 193, doi. 10.1046/j.1365-2958.2003.03658.x
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- Article
Replication restart in gyrB Escherichia coli mutants.
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- Molecular Microbiology, 2003, v. 48, n. 3, p. 845, doi. 10.1046/j.1365-2958.2003.03480.x
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- Article
A new mutation delivery system for genome-scale approaches in Bacillus subtilis.
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- Molecular Microbiology, 2002, v. 46, n. 1, p. 25, doi. 10.1046/j.1365-2958.2002.03140.x
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- Article
Discovery of two novel families of proteins that are proposed to interact with prokaryotic SMC proteins, and characterization of the Bacillus subtilis family members ScpA and ScpB.
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- Molecular Microbiology, 2002, v. 45, n. 1, p. 59, doi. 10.1046/j.1365-2958.2002.03012.x
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- Article
Replication fork reversal in DNA polymerase III mutants of Escherichia coli: a role for the β clamp.
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- Molecular Microbiology, 2002, v. 44, n. 5, p. 1331, doi. 10.1046/j.1365-2958.2002.02962.x
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- Article
Primosome assembly requirement for replication restart in the Escherichia coli holD<sup>G10</sup> replication mutant.
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- Molecular Microbiology, 2002, v. 44, n. 3, p. 783, doi. 10.1046/j.1365-2958.2002.02913.x
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- Article
DnaB, DnaD and DnaI proteins are components of the Bacillus subtilis replication restart primosome.
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- Molecular Microbiology, 2001, v. 42, n. 1, p. 245, doi. 10.1046/j.1365-2958.2001.02631.x
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- Article
Pleiotropic transcriptional repressor CodY senses the intracellular pool of branched-chain amino acids in Lactococcus lactis.
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- Molecular Microbiology, 2001, v. 40, n. 5, p. 1227, doi. 10.1046/j.1365-2958.2001.02470.x
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- Article
Replication mutations differentially enhance RecA-dependent and RecA-independent recombination between tandem repeats in Bacillus subtilis.
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- Molecular Microbiology, 2001, v. 39, n. 5, p. 1248, doi. 10.1111/j.1365-2958.2001.02312.x
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- Article
RuvABC-dependent double-strand breaks in dnaBts mutants require RecA.
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- Molecular Microbiology, 2000, v. 38, n. 3, p. 565, doi. 10.1046/j.1365-2958.2000.02152.x
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- Article
Resolution of Holliday junctions by RuvABC prevents dimer formation in rep mutants and UV-irradiated cells.
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- Molecular Microbiology, 2000, v. 37, n. 1, p. 180, doi. 10.1046/j.1365-2958.2000.01989.x
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- Article
Acid- and multistress-resistant mutants of Lactococcus lactis: identification of intracellular stress signals.
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- Molecular Microbiology, 2000, v. 35, n. 3, p. 517, doi. 10.1046/j.1365-2958.2000.01711.x
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- Article