Works by Ehrenreich, Ian M.

Results: 39

Climate envelope modelling reveals intraspecific relationships among flowering phenology, niche breadth and potential range size in Arabidopsis thaliana.

Published in:

Ecology Letters, 2012, v. 15, n. 8, p. 769, doi. 10.1111/j.1461-0248.2012.01796.x

By:

Banta, Joshua A.;
Ehrenreich, Ian M.;
Gerard, Silvia;
Chou, Lucy;
Wilczek, Amity;
Schmitt, Johanna;
Kover, Paula X.;
Purugganan, Michael D.;
Ris Lambers, Janneke Hille

Publication type:

Article

Building synthetic chromosomes from natural DNA.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-44112-2

By:

Coradini, Alessandro L. V.;
Ville, Christopher Ne;
Krieger, Zachary A.;
Roemer, Joshua;
Hull, Cara;
Yang, Shawn;
Lusk, Daniel T.;
Ehrenreich, Ian M.

Publication type:

Article

The complex role of genetic background in shaping the effects of spontaneous and induced mutations.

Published in:

Yeast, 2021, v. 38, n. 3, p. 187, doi. 10.1002/yea.3530

By:

Goldstein, Ilan;
Ehrenreich, Ian M.

Publication type:

Article

The complex underpinnings of genetic background effects.

Published in:

Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-06023-5

By:

Mullis, Martin N.;
Matsui, Takeshi;
Schell, Rachel;
Foree, Ryan;
Ehrenreich, Ian M.

Publication type:

Article

THE MOLECULAR GENETIC BASIS OF PLANT ADAPTATION.

Published in:

American Journal of Botany, 2006, v. 93, n. 7, p. 953, doi. 10.3732/ajb.93.7.953

By:

Ehrenreich, Ian M.;
Purugganan, Michael D.

Publication type:

Article

Finding the sources of missing heritability in a yeast cross.

Published in:

Nature, 2013, v. 494, n. 7436, p. 234, doi. 10.1038/nature11867

By:

Bloom, Joshua S.;
Ehrenreich, Ian M.;
Loo, Wesley T.;
Lite, Thúy-Lan Võ;
Kruglyak, Leonid

Publication type:

Article

Dissection of genetically complex traits with extremely large pools of yeast segregants.

Published in:

Nature, 2010, v. 464, n. 7291, p. 1039, doi. 10.1038/nature08923

By:

Ehrenreich, Ian M.;
Torabi, Noorossadat;
Yue Jia;
Kent, Jonathan;
Martis, Stephen;
Shapiro, Joshua A.;
Gresham, David;
Caudy, Amy A.;
Kruglyak, Leonid

Publication type:

Article

Genome-scale analysis of interactions between genetic perturbations and natural variation.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-48626-1

By:

Hale, Joseph J.;
Matsui, Takeshi;
Goldstein, Ilan;
Mullis, Martin N.;
Roy, Kevin R.;
Ville, Christopher Ne;
Miller, Darach;
Wang, Charley;
Reynolds, Trevor;
Steinmetz, Lars M.;
Levy, Sasha F.;
Ehrenreich, Ian M.

Publication type:

Article

Epistasis: Searching for Interacting Genetic Variants Using Crosses.

Published in:

Genetics, 2017, v. 206, n. 2, p. 531, doi. 10.1534/genetics.117.203059

By:

Ehrenreich, Ian M.

Publication type:

Article

Regulatory Rewiring in a Cross Causes Extensive Genetic Heterogeneity.

Published in:

Genetics, 2015, v. 201, n. 2, p. 769, doi. 10.1534/genetics.115.180661

By:

Takeshi Matsui;
Linder, Robert;
Phan, Joann;
Seidl, Fabian;
Ehrenreich, Ian M.

Publication type:

Article

Candidate Gene Association Mapping of Arabidopsis Flowering Time.

Published in:

Genetics, 2009, v. 183, n. 1, p. 325, doi. 10.1534/genetics.109.105189

By:

Ehrenreich, Ian M.;
Hanzawa, Yoshie;
Chou, Lucy;
Roe, Judith L.;
Kover, Paula X.;
Purugganan, Michael D.

Publication type:

Article

The Genetic Architecture of Shoot Branching in Arabidopsis thaliana: A Comparative Assessment of Candidate Gene Associations vs. Quantitative Trait Locus Mapping.

Published in:

Genetics, 2007, v. 176, n. 2, p. 1223, doi. 10.1534/genetics.107.071928

By:

Ehrenreich, Ian M.;
Stafford, Philip A.;
Purugganan, Michael D.

Publication type:

Article

Variation in hybrid gene expression: Implications for the evolution of genetic incompatibilities in interbreeding species.

Published in:

Molecular Ecology, 2019, v. 28, n. 20, p. 4667, doi. 10.1111/mec.15246

By:

Seidl, Fabian;
Levis, Nicholas A.;
Jones, Corbin D.;
Monroy‐Eklund, Anaïs;
Ehrenreich, Ian M.;
Pfennig, Karin S.

Publication type:

Article

Extreme QTL mapping of germination speed in Arabidopsis thaliana.

Published in:

Molecular Ecology, 2016, v. 25, n. 17, p. 4177, doi. 10.1111/mec.13768

By:

Yuan, Wei;
Flowers, Jonathan M.;
Sahraie, Dustin J.;
Ehrenreich, Ian M.;
Purugganan, Michael D.

Publication type:

Article

Towards a gene regulatory network perspective on phenotypic plasticity, genetic accommodation and genetic assimilation.

Published in:

Molecular Ecology, 2014, v. 23, n. 18, p. 4438, doi. 10.1111/mec.12887

By:

Pfennig, David W.;
Ehrenreich, Ian M.

Publication type:

Article

Genetic suppression: Extending our knowledge from lab experiments to natural populations.

Published in:

BioEssays, 2017, v. 39, n. 7, p. n/a, doi. 10.1002/bies.201700023

By:

Matsui, Takeshi;
Lee, Jonathan T.;
Ehrenreich, Ian M.

Publication type:

Article

Transcriptomic bases of a polyphenism.

Published in:

Journal of Experimental Zoology Part B: Molecular & Developmental Evolution, 2021, v. 336, n. 6, p. 482, doi. 10.1002/jez.b.23066

By:

Levis, Nicholas A.;
Kelly, Patrick W.;
Harmon, Emily A.;
Ehrenreich, Ian M.;
McKay, Daniel J.;
Pfennig, David W.

Publication type:

Article

Phenotypic and genotypic characterization of multiple strains of the diazotrophic cyanobacterium, Crocosphaera watsonii, isolated from the open ocean.

Published in:

Environmental Microbiology, 2009, v. 11, n. 2, p. 338, doi. 10.1111/j.1462-2920.2008.01771.x

By:

Webb, Eric A.;
Ehrenreich, Ian M.;
Brown, Susan L.;
Valois, Frederica W.;
Waterbury, John B.

Publication type:

Article

Genetic assimilation: a review of its potential proximate causes and evolutionary consequences.

Published in:

Annals of Botany, 2016, v. 117, n. 5, p. 769, doi. 10.1093/aob/mcv130

By:

Ehrenreich, Ian M.;
Pfennig, David W.

Publication type:

Article

Genome of Spea multiplicata, a Rapidly Developing, Phenotypically Plastic, and Desert-Adapted Spadefoot Toad.

Published in:

G3: Genes | Genomes | Genetics, 2019, v. 9, n. 12, p. 3909, doi. 10.1534/g3.119.400705

By:

Seidl, Fabian;
Levis, Nicholas A.;
Schell, Rachel;
Pfennig, David W.;
Pfennig, Karin S.;
Ehrenreich, Ian M.

Publication type:

Article

The Stress-Inducible Peroxidase TSA2 Underlies a Conditionally Beneficial Chromosomal Duplication in Saccharomyces cerevisiae.

Published in:

G3: Genes | Genomes | Genetics, 2017, v. 7, n. 9, p. 3177, doi. 10.1534/g3.117.300069

By:

Linder, Robert A.;
Greco, John P.;
Seidl, Fabian;
Takeshi Matsui;
Ehrenreich, Ian M.

Publication type:

Article

Epistasis: Searching for Interacting Genetic Variants Using Crosses.

Published in:

G3: Genes | Genomes | Genetics, 2017, v. 7, n. 6, p. 1619, doi. 10.1534/g3.117.042770

By:

Ehrenreich, Ian M.

Publication type:

Article

Complex Rearrangements Lead to Novel Chimeric Gene Fusion Polymorphisms at the Arabidopsis thaliana MAF2-5 Flowering Time Gene Cluster.

Published in:

Molecular Biology & Evolution, 2009, v. 26, n. 3, p. 699

By:

Caicedo, Ana L.;
Richards, Christina;
Ehrenreich, Ian M.;
Purugganan, Michael D.

Publication type:

Article

Diverse genetic architectures lead to the same cryptic phenotype in a yeast cross.

Published in:

Nature Communications, 2016, v. 7, n. 6, p. 11669, doi. 10.1038/ncomms11669

By:

Taylor, Matthew B.;
Phan, Joann;
Lee, Jonathan T.;
McCadden, Madelyn;
Ehrenreich, Ian M.

Publication type:

Article

Building genomes to understand biology.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-19753-2

By:

Coradini, Alessandro L. V.;
Hull, Cara B.;
Ehrenreich, Ian M.

Publication type:

Article

Genome-Wide Characterization of Genetic Variation in the Unicellular, Green Alga Chlamydomonas reinhardtii.

Published in:

PLoS ONE, 2012, v. 7, n. 7, p. 1, doi. 10.1371/journal.pone.0041307

By:

Hyosik Jang;
Ehrenreich, Ian M.

Publication type:

Article

Gene-Environment Interactions in Stress Response Contribute Additively to a Genotype-Environment Interaction.

Published in:

PLoS Genetics, 2016, v. 12, n. 7, p. 1, doi. 10.1371/journal.pgen.1006158

By:

Matsui, Takeshi;
Ehrenreich, Ian M.

Publication type:

Article

Multi-locus Genotypes Underlying Temperature Sensitivity in a Mutationally Induced Trait.

Published in:

PLoS Genetics, 2016, v. 12, n. 3, p. 1, doi. 10.1371/journal.pgen.1005929

By:

Lee, Jonathan T.;
Taylor, Matthew B.;
Shen, Amy;
Ehrenreich, Ian M.

Publication type:

Article

Transcriptional Derepression Uncovers Cryptic Higher-Order Genetic Interactions.

Published in:

PLoS Genetics, 2015, v. 11, n. 10, p. 1, doi. 10.1371/journal.pgen.1005606

By:

Taylor, Matthew B.;
Ehrenreich, Ian M.

Publication type:

Article

Genetic Interactions Involving Five or More Genes Contribute to a Complex Trait in Yeast.

Published in:

PLoS Genetics, 2014, v. 10, n. 5, p. 1, doi. 10.1371/journal.pgen.1004324

By:

Taylor, Matthew B.;
Ehrenreich, Ian M.

Publication type:

Article

Genetic Architecture of Highly Complex Chemical Resistance Traits across Four Yeast Strains.

Published in:

PLoS Genetics, 2012, v. 8, n. 3, p. 1, doi. 10.1371/journal.pgen.1002570

By:

Ehrenreich, Ian M.;
Bloom, Joshua;
Torabi, Noorossadat;
Xin Wang;
Yue Jia;
Kruglyak, Leonid

Publication type:

Article

Modifiers of the Genotype–Phenotype Map: Hsp90 and Beyond.

Published in:

PLoS Biology, 2016, v. 14, n. 11, p. 1, doi. 10.1371/journal.pbio.2001015

By:

Schell, Rachel;
Mullis, Martin;
Ehrenreich, Ian M.

Publication type:

Article

Complex genetics cause and constrain fungal persistence in different parts of the mammalian body.

Published in:

Genetics, 2022, v. 222, n. 3, p. 1, doi. 10.1093/genetics/iyac138

By:

Mullis, Martin N.;
Ghione, Caleb;
Lough-Stevens, Michael;
Goldstein, Ilan;
Takeshi Matsui;
Levy, Sasha F.;
Dean, Matthew D.;
Ehrenreich, Ian M.

Publication type:

Article

Genetic basis of a spontaneous mutation's expressivity.

Published in:

Genetics, 2022, v. 220, n. 3, p. 1, doi. 10.1093/genetics/iyac013

By:

Schell, Rachel;
Hale, Joseph J.;
Mullis, Martin N.;
Takeshi Matsui;
Foree, Ryan;
Ehrenreich, Ian M.

Publication type:

Article

Layers of Cryptic Genetic Variation Underlie a Yeast Complex Trait.

Published in:

Genetics, 2019, v. 211, n. 4, p. 1469, doi. 10.1534/genetics.119.301907

By:

Lee, Jonathan T.;
Coradini, Alessandro L. V.;
Shen, Amy;
Ehrenreich, Ian M.

Publication type:

Article

The interplay of additivity, dominance, and epistasis on fitness in a diploid yeast cross.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-29111-z

By:

Matsui, Takeshi;
Mullis, Martin N.;
Roy, Kevin R.;
Hale, Joseph J.;
Schell, Rachel;
Levy, Sasha F.;
Ehrenreich, Ian M.

Publication type:

Article

The interplay of additivity, dominance, and epistasis on fitness in a diploid yeast cross.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-29111-z

By:

Matsui, Takeshi;
Mullis, Martin N.;
Roy, Kevin R.;
Hale, Joseph J.;
Schell, Rachel;
Levy, Sasha F.;
Ehrenreich, Ian M.

Publication type:

Article

Genetic Variants Underlying Plasticity in Natural Populations of Spadefoot Toads: Environmental Assessment versus Phenotypic Response.

Published in:

Genes, 2024, v. 15, n. 5, p. 611, doi. 10.3390/genes15050611

By:

Isdaner, Andrew J.;
Levis, Nicholas A.;
Ehrenreich, Ian M.;
Pfennig, David W.

Publication type:

Article

A Multiparent Advanced Generation Inter-Cross to Fine-Map Quantitative Traits in Arabidopsis thaliana.

Published in:

PLoS Genetics, 2009, v. 5, n. 7, p. 1, doi. 10.1371/journal.pgen.1000551

By:

Kover, Paula X.;
Valdar, William;
Trakalo, Joseph;
Scarcelli, Nora;
Ehrenreich, Ian M.;
Purugganan, Michael D.;
Durrant, Caroline;
Mott, Richard

Publication type:

Article