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NF-κB and epithelial to mesenchymal transition of cancer.
- Published in:
- Journal of Cellular Biochemistry, 2008, v. 104, n. 3, p. 733, doi. 10.1002/jcb.21695
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- Publication type:
- Article
A simple algorithm to infer gene duplication and speciation events on a gene tree.
- Published in:
- Bioinformatics, 2001, v. 17, n. 9, p. 821, doi. 10.1093/bioinformatics/17.9.821
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- Publication type:
- Article
ATV: display and manipulation of annotated phylogenetic trees.
- Published in:
- Bioinformatics, 2001, v. 17, n. 4, p. 383, doi. 10.1093/bioinformatics/17.4.383
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- Publication type:
- Article
Secondary structure alone is generally not statistically significant for the detection of noncoding RNAs.
- Published in:
- Bioinformatics, 2000, v. 16, n. 7, p. 583, doi. 10.1093/bioinformatics/16.7.583
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- Publication type:
- Article
The language of RNA: a formal grammar that includes pseudoknots.
- Published in:
- Bioinformatics, 2000, v. 16, n. 4, p. 334, doi. 10.1093/bioinformatics/16.4.334
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- Publication type:
- Article
The association of low birthweight and prematurity on outcomes in children and adults with nephrotic syndrome—a NEPTUNE cohort study.
- Published in:
- Pediatric Nephrology, 2023, v. 38, n. 10, p. 3297, doi. 10.1007/s00467-023-05876-3
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- Publication type:
- Article
An integrated organoid omics map extends modeling potential of kidney disease.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-39740-7
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- Publication type:
- Article
Differential expression of Akt, PPARγ, and PGC-1 during hibernation in bats.
- Published in:
- Biochemistry & Cell Biology, 2003, v. 81, n. 4, p. 269
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- Publication type:
- Article
Gene expression profiles of diabetic kidney disease and neuropathy in eNOS knockout mice: Predictors of pathology and RAS blockade effects.
- Published in:
- FASEB Journal, 2021, v. 35, n. 5, p. 1, doi. 10.1096/fj.202002387R
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- Publication type:
- Article
Correction: Constructing Benchmark Test Sets for Biological Sequence Analysis Using Independent Set Algorithms.
- Published in:
- 2023
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- Publication type:
- Correction Notice
Pack-MULE transposable elements mediate gene evolution in plants.
- Published in:
- Nature, 2004, v. 431, n. 7008, p. 569, doi. 10.1038/nature02953
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- Publication type:
- Article
Unrestricted free access works and must continue.
- Published in:
- Nature, 2003, v. 422, n. 6934, p. 801, doi. 10.1038/422801a
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- Publication type:
- Article
An active DNA transposon family in rice.
- Published in:
- Nature, 2003, v. 421, n. 6919, p. 163, doi. 10.1038/nature01214
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- Publication type:
- Article
NON-CODING RNA GENES AND THE MODERN RNA WORLD.
- Published in:
- Nature Reviews Genetics, 2001, v. 2, n. 12, p. 919, doi. 10.1038/35103511
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- Publication type:
- Article
Combinatorial DNA Rearrangement Facilitates the Origin of New Genes in Ciliates.
- Published in:
- Genome Biology & Evolution, 2015, v. 7, n. 10, p. 2859, doi. 10.1093/gbe/evv172
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- Publication type:
- Article
Parameterizing sequence alignment with an explicit evolutionary model.
- Published in:
- BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/s12859-015-0832-5
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- Publication type:
- Article
Hidden Markov model speed heuristic anditerative HMM search procedure.
- Published in:
- BMC Bioinformatics, 2010, v. 11, p. 431, doi. 10.1186/1471-2105-11-431
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- Publication type:
- Article
Constructing benchmark test sets for biological sequence analysis using independent set algorithms.
- Published in:
- PLoS Computational Biology, 2022, v. 18, n. 3, p. 1, doi. 10.1371/journal.pcbi.1009492
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- Publication type:
- Article
p38<sup>MAPK</sup> regulation of transcription factor targets in muscle and heart of the hibernating bat, Myotis lucifugus.
- Published in:
- Cell Biochemistry & Function, 2007, v. 25, n. 6, p. 759, doi. 10.1002/cbf.1416
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- Publication type:
- Article
A computational screen for alternative genetic codes in over 250,000 genomes.
- Published in:
- eLife, 2021, p. 1, doi. 10.7554/eLife.71402
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- Publication type:
- Article
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.
- Published in:
- Nucleic Acids Research, 1997, v. 25, n. 5, p. 955, doi. 10.1093/nar/25.5.955
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- Publication type:
- Article
Many, but not all, lineage-specific genes can be explained by homology detection failure.
- Published in:
- PLoS Biology, 2020, v. 18, n. 11, p. 1, doi. 10.1371/journal.pbio.3000862
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- Publication type:
- Article
A genetic, genomic, and computational resource for exploring neural circuit function.
- Published in:
- eLife, 2020, p. 1, doi. 10.7554/eLife.50901
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- Publication type:
- Article
Free circular introns with an unusual branchpoint in neuronal projections.
- Published in:
- eLife, 2019, p. 1, doi. 10.7554/eLife.47809
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- Publication type:
- Article
Epigenomic landscapes of retinal rods and cones.
- Published in:
- eLife, 2016, p. 1, doi. 10.7554/eLife.11613
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- Publication type:
- Article
How do RNA folding algorithms work?
- Published in:
- Nature Biotechnology, 2004, v. 22, n. 11, p. 1457, doi. 10.1038/nbt1104-1457
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- Publication type:
- Article
What is a hidden Markov model?
- Published in:
- Nature Biotechnology, 2004, v. 22, n. 10, p. 1315, doi. 10.1038/nbt1004-1315
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- Publication type:
- Article
What is Bayesian statistics?
- Published in:
- Nature Biotechnology, 2004, v. 22, n. 9, p. 1177, doi. 10.1038/nbt0904-1177
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- Publication type:
- Article
Where did the BLOSUM62 alignment score matrix come from?
- Published in:
- Nature Biotechnology, 2004, v. 22, n. 8, p. 1035, doi. 10.1038/nbt0804-1035
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- Publication type:
- Article
What is dynamic programming?
- Published in:
- Nature Biotechnology, 2004, v. 22, n. 7, p. 909, doi. 10.1038/nbt0704-909
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- Publication type:
- Article
Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction.
- Published in:
- BMC Bioinformatics, 2004, v. 5, p. 71, doi. 10.1186/1471-2105-5-71
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- Publication type:
- Article
RSEARCH: Finding homologs of single structured RNA sequences.
- Published in:
- BMC Bioinformatics, 2003, v. 4, p. 44, doi. 10.1186/1471-2105-4-44
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- Publication type:
- Article
A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure.
- Published in:
- BMC Bioinformatics, 2002, v. 3, p. 18, doi. 10.1186/1471-2105-3-18
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- Publication type:
- Article
RIO: Analyzing proteomes by automated phylogenomics using resampled inference of orthologs.
- Published in:
- BMC Bioinformatics, 2002, v. 3, p. 14, doi. 10.1186/1471-2105-3-14
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- Publication type:
- Article
The Distributed Annotation System.
- Published in:
- BMC Bioinformatics, 2001, v. 2, p. 7, doi. 10.1186/1471-2105-2-7
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- Publication type:
- Article
Noncoding RNA gene detection using comparative sequence analysis.
- Published in:
- BMC Bioinformatics, 2001, v. 2, p. 8, doi. 10.1186/1471-2105-2-8
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- Publication type:
- Article
Accelerated Profile HMM Searches.
- Published in:
- PLoS Computational Biology, 2011, v. 7, n. 10, p. 1, doi. 10.1371/journal.pcbi.1002195
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- Publication type:
- Article
Probabilistic Phylogenetic Inference with Insertions and Deletions.
- Published in:
- PLoS Computational Biology, 2008, v. 4, n. 9, p. 1, doi. 10.1371/journal.pcbi.1000172
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- Publication type:
- Article
A Probabilistic Model of Local Sequence Alignment That Simplifies Statistical Significance Estimation.
- Published in:
- PLoS Computational Biology, 2008, v. 4, n. 5, p. 1, doi. 10.1371/journal.pcbi.1000069
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- Publication type:
- Article
Query-Dependent Banding (QDB) for Faster RNA Similarity Searches.
- Published in:
- PLoS Computational Biology, 2007, v. 3, n. 3, p. 0540, doi. 10.1371/journal.pcbi.0030056
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- Publication type:
- Article
"Antedisciplinary" Science.
- Published in:
- PLoS Computational Biology, 2005, v. 1, n. 1, p. 3, doi. 10.1371/journal.pcbi.0010006
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- Publication type:
- Article
Estimating the power of sequence covariation for detecting conserved RNA structure.
- Published in:
- Bioinformatics, 2020, v. 36, n. 10, p. 3072, doi. 10.1093/bioinformatics/btaa080
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- Publication type:
- Article
Transcription Factors That Convert Adult Cell Identity Are Differentially Polycomb Repressed
- Published in:
- PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0063407
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- Publication type:
- Article
Open Revolution.
- Published in:
- 2009
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- Publication type:
- Book Review
A Model of the Statistical Power of Comparative Genome Sequence Analysis.
- Published in:
- PLoS Biology, 2005, v. 3, n. 1, p. 1, doi. 10.1371/journal.pbio.0030010
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- Publication type:
- Article
A Model of the Statistical Power of Comparative Genome Sequence Analysis.
- Published in:
- PLoS Biology, 2005, v. 3, n. 1, p. 95, doi. 10.1371/journal.pbio.0030010
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- Publication type:
- Article
Local TNF causes NFATc1-dependent cholesterol-mediated podocyte injury.
- Published in:
- 2016
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- Publication type:
- journal article
Rfam 14: expanded coverage of metagenomic, viral and microRNA families.
- Published in:
- Nucleic Acids Research, 2021, v. 49, n. D1, p. D192, doi. 10.1093/nar/gkaa1047
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- Publication type:
- Article
The Pfam protein families database in 2019.
- Published in:
- Nucleic Acids Research, 2019, v. 47, n. D1, p. D427, doi. 10.1093/nar/gky995
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- Publication type:
- Article
Group I introns are widespread in archaea.
- Published in:
- Nucleic Acids Research, 2018, v. 46, n. 15, p. 7970, doi. 10.1093/nar/gky414
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- Publication type:
- Article