OpenURL Connection Search

Select item for more details and to access through your institution.

Unlocking the Potential of Genomic Data to Inform Typhoid Fever Control Policy: Supportive Resources for Genomic Data Generation, Analysis, and Visualization.
Published in:
Open Forum Infectious Diseases, 2023, v. 10, p. S38, doi. 10.1093/ofid/ofad044
By:
- Carey, Megan E;
- Dyson, Zoe A;
- Argimón, Silvia;
- Cerdeira, Louise;
- Yeats, Corin;
- Aanensen, David;
- Mboowa, Gerald;
- Baker, Stephen;
- Tessema, Sofonias K;
- Smith, Anthony M;
- Okeke, Iruka N;
- Holt, Kathryn E
Publication type:
Article
Multiple Introductions of Salmonella enterica Serovar Typhi H58 with Reduced Fluoroquinolone Susceptibility into Chile.
Published in:
2020
By:
- Maes, Mailis;
- Dyson, Zoe A.;
- Higginson, Ellen E.;
- Fernandez, Alda;
- Araya, Pamela;
- Tennant, Sharon M.;
- Baker, Stephen;
- Lagos, Rosanna;
- Levine, Myron M.;
- Hormazabal, Juan Carlos;
- Dougan, Gordon
Publication type:
journal article
Paratype: a genotyping tool for Salmonella Paratyphi A reveals its global genomic diversity.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-35587-6
By:
- Tanmoy, Arif M.;
- Hooda, Yogesh;
- Sajib, Mohammad S. I.;
- da Silva, Kesia E.;
- Iqbal, Junaid;
- Qamar, Farah N.;
- Luby, Stephen P.;
- Dougan, Gordon;
- Dyson, Zoe A.;
- Baker, Stephen;
- Garrett, Denise O.;
- Andrews, Jason R.;
- Saha, Samir K.;
- Saha, Senjuti
Publication type:
Article
Genetic diversity of Salmonella Paratyphi A isolated from enteric fever patients in Bangladesh from 2008 to 2018.
Published in:
PLoS Neglected Tropical Diseases, 2021, v. 15, n. 10, p. 1, doi. 10.1371/journal.pntd.0009748
By:
- Rahman, Sadia Isfat Ara;
- Nguyen, To Nguyen Thi;
- Khanam, Farhana;
- Thomson, Nicholas R.;
- Dyson, Zoe A.;
- Taylor-Brown, Alyce;
- Chowdhury, Emran Kabir;
- Dougan, Gordon;
- Baker, Stephen;
- Qadri, Firdausi
Publication type:
Article
A global resource for genomic predictions of antimicrobial resistance and surveillance of Salmonella Typhi at pathogenwatch.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-23091-2
By:
- Argimón, Silvia;
- Yeats, Corin A.;
- Goater, Richard J.;
- Abudahab, Khalil;
- Taylor, Benjamin;
- Underwood, Anthony;
- Sánchez-Busó, Leonor;
- Wong, Vanessa K.;
- Dyson, Zoe A.;
- Nair, Satheesh;
- Park, Se Eun;
- Marks, Florian;
- Page, Andrew J.;
- Keane, Jacqueline A.;
- Baker, Stephen;
- Holt, Kathryn E.;
- Dougan, Gordon;
- Aanensen, David M.
Publication type:
Article
Inferring demographic parameters in bacterial genomic data using Bayesian and hybrid phylogenetic methods.
Published in:
BMC Evolutionary Biology, 2018, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12862-018-1210-5
By:
- Duchene, Sebastian;
- Duchene, David A.;
- Geoghegan, Jemma L.;
- Dyson, Zoe A.;
- Hawkey, Jane;
- Holt, Kathryn E.
Publication type:
Article
Whole Genome Sequence Analysis of Salmonella Typhi Isolated in Thailand before and after the Introduction of a National Immunization Program.
Published in:
PLoS Neglected Tropical Diseases, 2017, v. 11, n. 1, p. 1, doi. 10.1371/journal.pntd.0005274
By:
- Dyson, Zoe A.;
- Holt, Kathryn E.;
- Thanh, Duy Pham;
- Vinh, Phat Voong;
- Thanh, Tuyen Ha;
- Rabaa, Maia A.;
- Thwaites, Guy E.;
- Baker, Stephen;
- Bodhidatta, Ladaporn;
- Mason, Carl Jeffries;
- Srijan, Apichai
Publication type:
Article
Lysis to Kill: Evaluation of the Lytic Abilities, and Genomics of Nine Bacteriophages Infective for Gordonia spp. and Their Potential Use in Activated Sludge Foam Biocontrol.
Published in:
PLoS ONE, 2015, v. 10, n. 8, p. 1, doi. 10.1371/journal.pone.0134512
By:
- Dyson, Zoe A.;
- Tucci, Joseph;
- Seviour, Robert J.;
- Petrovski, Steve
Publication type:
Article
Multiple introductions of multidrug-resistant typhoid associated with acute infection and asymptomatic carriage, Kenya.
Published in:
eLife, 2021, p. 1, doi. 10.7554/eLife.67852
By:
- Kariuki, Samuel;
- Dyson, Zoe A.;
- Mbae, Cecilia;
- Ngetich, Ronald;
- Kavai, Susan M.;
- Wairimu, Celestine;
- Anyona, Stephen;
- Gitau, Naomi;
- Onsare, Robert Sanaya;
- Ongandi, Beatrice;
- Duchene, Sebastian;
- Ali, Mohamed;
- Clemens, John David;
- Holt, Kathryn E.;
- Dougan, Gordon
Publication type:
Article
Laboratory and molecular surveillance of paediatric typhoidal Salmonella in Nepal: Antimicrobial resistance and implications for vaccine policy.
Published in:
PLoS Neglected Tropical Diseases, 2018, v. 12, n. 3, p. 1, doi. 10.1371/journal.pntd.0006408
By:
- Britto, Carl D.;
- Dyson, Zoe A.;
- Duchene, Sebastian;
- Carter, Michael J.;
- Gurung, Meeru;
- Kelly, Dominic F.;
- Murdoch, David R.;
- Ansari, Imran;
- Thorson, Stephen;
- Shrestha, Shrijana;
- Adhikari, Neelam;
- Dougan, Gordon;
- Holt, Kathryn E.;
- Pollard, Andrew J.
Publication type:
Article
Population structure and antimicrobial resistance patterns of Salmonella Typhi isolates in urban Dhaka, Bangladesh from 2004 to 2016.
Published in:
PLoS Neglected Tropical Diseases, 2020, v. 14, n. 2, p. 1, doi. 10.1371/journal.pntd.0008036
By:
- Rahman, Sadia Isfat Ara;
- Dyson, Zoe A.;
- Klemm, Elizabeth J.;
- Khanam, Farhana;
- Holt, Kathryn E.;
- Chowdhury, Emran Kabir;
- Dougan, Gordon;
- Qadri, Firdausi
Publication type:
Article
Informal genomic surveillance of regional distribution of Salmonella Typhi genotypes and antimicrobial resistance via returning travellers.
Published in:
PLoS Neglected Tropical Diseases, 2019, v. 13, n. 9, p. 1, doi. 10.1371/journal.pntd.0007620
By:
- Ingle, Danielle J.;
- Nair, Satheesh;
- Hartman, Hassan;
- Ashton, Philip M.;
- Dyson, Zoe A.;
- Day, Martin;
- Freedman, Joanne;
- Chattaway, Marie A.;
- Holt, Kathryn E.;
- Dallman, Timothy J.
Publication type:
Article
The origins of haplotype 58 (H58) Salmonella enterica serovar Typhi.
Published in:
Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06451-8
By:
- Carey, Megan E.;
- Thi Nguyen, To Nguyen;
- Tran, Do Hoang Nhu;
- Dyson, Zoe A.;
- Keane, Jacqueline A.;
- Pham Thanh, Duy;
- Mylona, Elli;
- Nair, Satheesh;
- Chattaway, Marie;
- Baker, Stephen
Publication type:
Article
Functional analysis of Salmonella Typhi adaptation to survival in water.
Published in:
Environmental Microbiology, 2018, v. 20, n. 11, p. 4079, doi. 10.1111/1462-2920.14458
By:
- Kingsley, Robert A.;
- Langridge, Gemma;
- Smith, Sarah E.;
- Makendi, Carine;
- Fookes, Maria;
- Wileman, Tom M.;
- El Ghany, Moataz Abd;
- Keith Turner, A.;
- Dyson, Zoe A.;
- Sridhar, Sushmita;
- Pickard, Derek;
- Kay, Sally;
- Feasey, Nicholas;
- Wong, Vanessa;
- Barquist, Lars;
- Dougan, Gordon
Publication type:
Article
An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid.
Published in:
Nature Communications, 2016, v. 7, n. 10, p. 12827, doi. 10.1038/ncomms12827
By:
- Wong, Vanessa K.;
- Baker, Stephen;
- Connor, Thomas R.;
- Pickard, Derek;
- Page, Andrew J.;
- Dave, Jayshree;
- Murphy, Niamh;
- Holliman, Richard;
- Sefton, Armine;
- Millar, Michael;
- Dyson, Zoe A.;
- Dougan, Gordon;
- Holt, Kathryn E.
Publication type:
Article
Spontaneous Emergence of Azithromycin Resistance in Independent Lineages of Salmonella Typhi in Northern India.
Published in:
Clinical Infectious Diseases, 2021, v. 72, n. 5, p. e120, doi. 10.1093/cid/ciaa1773
By:
- Carey, Megan E;
- Jain, Ruby;
- Yousuf, Mohammad;
- Maes, Mailis;
- Dyson, Zoe A;
- Thu, Trang Nguyen Hoang;
- Nguyen, To Nguyen Thi;
- Dan, Thanh Ho Ngoc;
- Nguyen, Quynh Nhu Pham;
- Mahindroo, Jaspreet;
- Pham, Duy Thanh;
- Sandha, Kawaljeet Singh;
- Baker, Stephen;
- Taneja, Neelam
Publication type:
Article
A Biohistorical Perspective of Typhoid and Antimicrobial Resistance.
Published in:
Clinical Infectious Diseases, 2019, v. 69, p. S388, doi. 10.1093/cid/ciz556
By:
- Kirchhelle, Claas;
- Dyson, Zoe Anne;
- Dougan, Gordon
Publication type:
Article
Antibiotic Resistance and Typhoid.
Published in:
Clinical Infectious Diseases, 2019, v. 68, p. S165, doi. 10.1093/cid/ciy1111
By:
- Dyson, Zoe A;
- Klemm, Elizabeth J;
- Palmer, Sophie;
- Dougan, Gordon
Publication type:
Article
Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes.
Published in:
eLife, 2023, p. 1, doi. 10.7554/eLife.85867
By:
- Carey, Megan E.;
- Dyson, Zoe A.;
- Ingle, Danielle J.;
- Amir, Afreenish;
- Aworh, Mabel K.;
- Chattaway, Marie Anne;
- Ka Lip Chew;
- Crump, John A.;
- Feasey, Nicholas A.;
- Howden, Benjamin P.;
- Keddy, Karen H.;
- Maes, Mailis;
- Parry, Christopher M.;
- Van Puyvelde, Sandra;
- Webb, Hattie E.;
- Afolayan, Ayorinde Oluwatobiloba;
- Alexander, Anna P.;
- Anandan, Shalini;
- Andrews, Jason R.;
- Ashton, Philip M.
Publication type:
Article
Publisher Correction: A novel therapeutic antibody screening method using bacterial high-content imaging reveals functional antibody binding phenotypes of Escherichia coli ST131.
Published in:
2021
By:
- Maes, Mailis;
- Dyson, Zoe A.;
- Smith, Sarah E.;
- Goulding, David A.;
- Ludden, Catherine;
- Baker, Stephen;
- Kellam, Paul;
- Reece, Stephen T.;
- Dougan, Gordon;
- Bartholdson Scott, Josefin
Publication type:
Correction Notice
A novel therapeutic antibody screening method using bacterial high-content imaging reveals functional antibody binding phenotypes of Escherichia coli ST131.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-69300-8
By:
- Maes, Mailis;
- Dyson, Zoe A.;
- Smith, Sarah E.;
- Goulding, David A.;
- Ludden, Catherine;
- Baker, Stephen;
- Kellam, Paul;
- Reece, Stephen T.;
- Dougan, Gordon;
- Scott, Josefin Bartholdson
Publication type:
Article
Locating and Activating Molecular ‘Time Bombs’: Induction of Mycolata Prophages.
Published in:
PLoS ONE, 2016, v. 11, n. 8, p. 1, doi. 10.1371/journal.pone.0159957
By:
- Dyson, Zoe A.;
- Brown, Teagan L.;
- Farrar, Ben;
- Doyle, Stephen R.;
- Tucci, Joseph;
- Seviour, Robert J.;
- Petrovski, Steve
Publication type:
Article
The Formulation of Bacteriophage in a Semi Solid Preparation for Control of Propionibacterium acnes Growth.
Published in:
PLoS ONE, 2016, v. 11, n. 3, p. 1, doi. 10.1371/journal.pone.0151184
By:
- Brown, Teagan L.;
- Petrovski, Steve;
- Dyson, Zoe A.;
- Seviour, Robert;
- Tucci, Joseph
Publication type:
Article
Multiplex PCR assay to detect high risk lineages of Salmonella Typhi and Paratyphi A.
Published in:
PLoS ONE, 2022, v. 17, n. 7, p. 1, doi. 10.1371/journal.pone.0267805
By:
- Khokhar, Fahad;
- Pickard, Derek;
- Dyson, Zoe;
- Iqbal, Junaid;
- Pragasam, Agila;
- John, Jobin Jacob;
- Veeraraghavan, Balaji;
- Qamar, Farah;
- Dougan, Gordon;
- MacQueen, Hilary;
- Rigas, Sushila;
- Holmes, Mark;
- Mutreja, Ankur
Publication type:
Article
Pathogen genomic surveillance of typhoidal Salmonella infection in adults and children reveals no association between clinical outcomes and infecting genotypes.
Published in:
Tropical Medicine & Health, 2020, v. 48, n. 1, p. 1, doi. 10.1186/s41182-020-00247-2
By:
- Britto, Carl D.;
- Mathias, Sitarah;
- Bosco, Ashish;
- Dyson, Zoe A.;
- Dougan, Gordon;
- Raveendran, Savitha;
- Abin, V. L.;
- Jose, Sanju;
- Nagaraj, Savitha;
- Holt, Kathryn E.;
- Pollard, Andrew J.
Publication type:
Article
Five Years of GenoTyphi: Updates to the Global Salmonella Typhi Genotyping Framework.
Published in:
2021
By:
- Dyson, Zoe A;
- Holt, Kathryn E
Publication type:
journal article
Persistent circulation of a fluoroquinolone-resistant Salmonella enterica Typhi clone in the Indian subcontinent.
Published in:
2020
By:
- Britto, Carl D;
- Dyson, Zoe A;
- Mathias, Sitarah;
- Bosco, Ashish;
- Dougan, Gordon;
- Jose, Sanju;
- Nagaraj, Savitha;
- Holt, Kathryn E;
- Pollard, Andrew J
Publication type:
journal article
Whole genome sequence analysis of Salmonella Typhi provides evidence of phylogenetic linkage between cases of typhoid fever in Santiago, Chile in the 1980s and 2010–2016.
Published in:
PLoS Neglected Tropical Diseases, 2022, v. 16, n. 6, p. 1, doi. 10.1371/journal.pntd.0010178
By:
- Maes, Mailis;
- Sikorski, Michael J.;
- Carey, Megan E.;
- Higginson, Ellen E.;
- Dyson, Zoe A.;
- Fernandez, Alda;
- Araya, Pamela;
- Tennant, Sharon M.;
- Baker, Stephen;
- Lagos, Rosanna;
- Hormazábal, Juan Carlos;
- Levine, Myron M.;
- Dougan, Gordon
Publication type:
Article
Whole genome sequence analysis of Salmonella Typhi in Papua New Guinea reveals an established population of genotype 2.1.7 sensitive to antimicrobials.
Published in:
PLoS Neglected Tropical Diseases, 2022, v. 16, n. 3, p. 1, doi. 10.1371/journal.pntd.0010306
By:
- Dyson, Zoe Anne;
- Malau, Elisheba;
- Horwood, Paul F.;
- Ford, Rebecca;
- Siba, Valentine;
- Yoannes, Mition;
- Pomat, William;
- Passey, Megan;
- Judd, Louise M.;
- Ingle, Danielle J.;
- Williamson, Deborah A.;
- Dougan, Gordon;
- Greenhill, Andrew R.;
- Holt, Kathryn E.
Publication type:
Article

Found: 29