Works matching AU Duvallet, Claire

Results: 16

Gut microbiota profiles of peninsular Malaysian populations are associated with urbanization and lifestyle.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-07117-z

By:

Jamaluddin, Nurul Fauzani;
Brovkina, Olga;
Nor Rashid, Nurshamimi;
Al-Maleki, Anis Rageh;
Lim, Yvonne Ai-Lian;
Tan, Maw Pin;
Lee, Soo Ching;
Duvallet, Claire;
Corzett, Christopher H.;
Alm, Eric;
Groussin, Mathieu;
Poyet, Mathilde;
Ibrahim, Fatimah

Publication type:

Article

Data detectives, self-love, and humility: a research parasite's perspective.

Published in:

GigaScience, 2020, v. 9, n. 1, p. N.PAG, doi. 10.1093/gigascience/giz148

By:

Duvallet, Claire

Publication type:

Article

A practical guide to methods controlling false discoveries in computational biology.

Published in:

Genome Biology, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s13059-019-1716-1

By:

Korthauer, Keegan;
Kimes, Patrick K.;
Duvallet, Claire;
Reyes, Alejandro;
Subramanian, Ayshwarya;
Teng, Mingxiang;
Shukla, Chinmay;
Alm, Eric J.;
Hicks, Stephanie C.

Publication type:

Article

Framework for rational donor selection in fecal microbiota transplant clinical trials.

Published in:

PLoS ONE, 2019, v. 14, n. 10, p. 1, doi. 10.1371/journal.pone.0222881

By:

Duvallet, Claire;
Zellmer, Caroline;
Panchal, Pratik;
Budree, Shrish;
Osman, Majdi;
Alm, Eric J.

Publication type:

Article

Mapping Community Opioid Exposure Through Wastewater-Based Epidemiology as a Means to Engage Pharmacies in Harm Reduction Efforts.

Published in:

2020

By:

Duvallet, Claire;
Hayes, Bryan D.;
Erickson, Timothy B.;
Chai, Peter R.;
Matus, Mariana

Publication type:

journal article

Meta‐analysis generates and prioritizes hypotheses for translational microbiome research.

Published in:

2018

By:

Duvallet, Claire

Publication type:

Editorial

MicrobiomeCensus estimates human population sizes from wastewater samples based on inter-individual variability in gut microbiomes.

Published in:

PLoS Computational Biology, 2022, v. 18, n. 9, p. 1, doi. 10.1371/journal.pcbi.1010472

By:

Zhang, Lin;
Chen, Likai;
Yu, Xiaoqian;
Duvallet, Claire;
Isazadeh, Siavash;
Dai, Chengzhen;
Park, Shinkyu;
Frois-Moniz, Katya;
Duarte, Fabio;
Ratti, Carlo;
Alm, Eric J.;
Ling, Fangqiong

Publication type:

Article

dbOTU3: A new implementation of distribution-based OTU calling.

Published in:

PLoS ONE, 2017, v. 12, n. 5, p. 1, doi. 10.1371/journal.pone.0176335

By:

Olesen, Scott W.;
Duvallet, Claire;
Alm, Eric J.

Publication type:

Article

Lineage abundance estimation for SARS-CoV-2 in wastewater using transcriptome quantification techniques.

Published in:

Genome Biology, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s13059-022-02805-9

By:

Baaijens, Jasmijn A.;
Zulli, Alessandro;
Ott, Isabel M.;
Nika, Ioanna;
van der Lugt, Mart J.;
Petrone, Mary E.;
Alpert, Tara;
Fauver, Joseph R.;
Kalinich, Chaney C.;
Vogels, Chantal B. F.;
Breban, Mallery I.;
Duvallet, Claire;
McElroy, Kyle A.;
Ghaeli, Newsha;
Imakaev, Maxim;
Mckenzie-Bennett, Malaika F.;
Robison, Keith;
Plocik, Alex;
Schilling, Rebecca;
Pierson, Martha

Publication type:

Article

Predictability and persistence of prebiotic dietary supplementation in a healthy human cohort.

Published in:

Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-30783-1

By:

Gurry, Thomas;
HST Microbiome Consortium*;
Gibbons, Sean M.;
Nguyen, Le Thanh Tu;
Kearney, Sean M.;
Ananthakrishnan, Ashwin;
Jiang, Xiaofang;
Duvallet, Claire;
Kassam, Zain;
Alm, Eric J.

Publication type:

Article

Aerodigestive sampling reveals altered microbial exchange between lung, oropharyngeal, and gastric microbiomes in children with impaired swallow function.

Published in:

PLoS ONE, 2019, v. 14, n. 5, p. 1, doi. 10.1371/journal.pone.0216453

By:

Duvallet, Claire;
Larson, Kara;
Snapper, Scott;
Iosim, Sonia;
Lee, Ann;
Freer, Katherine;
May, Kara;
Alm, Eric;
Rosen, Rachel

Publication type:

Article

"Waste Not, Want Not" — Leveraging Sewer Systems and Wastewater-Based Epidemiology for Drug Use Trends and Pharmaceutical Monitoring.

Published in:

Journal of Medical Toxicology, 2021, v. 17, n. 4, p. 397, doi. 10.1007/s13181-021-00853-4

By:

Erickson, Timothy B.;
Endo, Noriko;
Duvallet, Claire;
Ghaeli, Newsha;
Hess, Kaitlyn;
Alm, Eric J.;
Matus, Mariana;
Chai, Peter R.

Publication type:

Article

Rapid Assessment of Opioid Exposure and Treatment in Cities Through Robotic Collection and Chemical Analysis of Wastewater.

Published in:

Journal of Medical Toxicology, 2020, v. 16, n. 2, p. 195, doi. 10.1007/s13181-019-00756-5

By:

Endo, Norkio;
Ghaeli, Newsha;
Duvallet, Claire;
Foppe, Katelyn;
Erickson, Timothy B;
Matus, Mariana;
Chai, Peter R

Publication type:

Article

Meta-analysis of gut microbiome studies identifies disease-specific and shared responses.

Published in:

Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-01973-8

By:

Duvallet, Claire;
Gibbons, Sean M.;
Gurry, Thomas;
Alm, Eric J.;
Irizarry, Rafael A.

Publication type:

Article

Correcting for batch effects in case-control microbiome studies.

Published in:

PLoS Computational Biology, 2018, v. 14, n. 3, p. 1, doi. 10.1371/journal.pcbi.1006102

By:

Gibbons, Sean M.;
Duvallet, Claire;
Alm, Eric J.

Publication type:

Article

Predicting human health from biofluid-based metabolomics using machine learning.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-74823-1

By:

Evans, Ethan D.;
Duvallet, Claire;
Chu, Nathaniel D.;
Oberst, Michael K.;
Murphy, Michael A.;
Rockafellow, Isaac;
Sontag, David;
Alm, Eric J.

Publication type:

Article