Works by Dunning, Luke T.

Results: 37

A nuclear phylogenomic tree of grasses (Poaceae) recovers current classification despite gene tree incongruence.

Published in:

New Phytologist, 2025, v. 245, n. 2, p. 818, doi. 10.1111/nph.20263

By:

Arthan, Watchara;
Baker, William J.;
Barrett, Matthew D.;
Barrett, Russell L.;
Bennetzen, Jeffrey L.;
Besnard, Guillaume;
Bianconi, Matheus E.;
Birch, Joanne L.;
Catalán, Pilar;
Chen, Wenli;
Christenhusz, Maarten;
Christin, Pascal‐Antoine;
Clark, Lynn G.;
Columbus, J. Travis;
Couch, Charlotte A.;
Crayn, Darren M.;
Davidse, Gerrit;
Dransfield, Soejatmi;
Dunning, Luke T.;
Duvall, Melvin R.

Publication type:

Article

Identifying genomic regions associated with C4 photosynthetic activity and leaf anatomy in Alloteropsis semialata.

Published in:

New Phytologist, 2024, v. 243, n. 5, p. 1698, doi. 10.1111/nph.19933

By:

Alenazi, Ahmed S.;
Pereira, Lara;
Christin, Pascal‐Antoine;
Osborne, Colin P.;
Dunning, Luke T.

Publication type:

Article

C4 photosynthesis provided an immediate demographic advantage to populations of the grass Alloteropsis semialata.

Published in:

New Phytologist, 2024, v. 242, n. 2, p. 774, doi. 10.1111/nph.19606

By:

Sotelo, Graciela;
Gamboa, Sara;
Dunning, Luke T.;
Christin, Pascal‐Antoine;
Varela, Sara

Publication type:

Article

Lateral gene transfer generates accessory genes that accumulate at different rates within a grass lineage.

Published in:

New Phytologist, 2023, v. 240, n. 5, p. 2072, doi. 10.1111/nph.19272

By:

Raimondeau, Pauline;
Bianconi, Matheus E.;
Pereira, Lara;
Parisod, Christian;
Christin, Pascal‐Antoine;
Dunning, Luke T.

Publication type:

Article

Widespread lateral gene transfer among grasses.

Published in:

New Phytologist, 2021, v. 230, n. 6, p. 2474, doi. 10.1111/nph.17328

By:

Hibdige, Samuel G. S.;
Raimondeau, Pauline;
Christin, Pascal‐Antoine;
Dunning, Luke T.

Publication type:

Article

Hybridisation and chloroplast capture between distinct Themeda triandra lineages in Australia.

Published in:

Molecular Ecology, 2022, v. 31, n. 22, p. 5846, doi. 10.1111/mec.16691

By:

Dunning, Luke T.;
Olofsson, Jill K.;
Papadopulos, Alexander S. T.;
Hibdige, Samuel G. S.;
Hidalgo, Oriane;
Leitch, Ilia J.;
Baleeiro, Paulo C.;
Ntshangase, Sinethemba;
Barker, Nigel;
Jobson, Richard W.

Publication type:

Article

Low dispersal and ploidy differences in a grass maintain photosynthetic diversity despite gene flow and habitat overlap.

Published in:

Molecular Ecology, 2021, v. 30, n. 9, p. 2116, doi. 10.1111/mec.15871

By:

Olofsson, Jill K.;
Curran, Emma V.;
Nyirenda, Florence;
Bianconi, Matheus E.;
Dunning, Luke T.;
Milenkovic, Vanja;
Sotelo, Graciela;
Hidalgo, Oriane;
Powell, Robyn F.;
Lundgren, Marjorie R.;
Leitch, Ilia J.;
Nosil, Patrik;
Osborne, Colin P.;
Christin, Pascal‐Antoine

Publication type:

Article

C4 trees have a broader niche than their close C3 relatives.

Published in:

Journal of Experimental Botany, 2022, v. 73, n. 10, p. 3189, doi. 10.1093/jxb/erac113

By:

Young, Sophie N R;
Dunning, Luke T;
Liu, Hui;
Stevens, Carly J;
Lundgren, Marjorie R

Publication type:

Article

Key changes in gene expression identified for different stages of C 4 evolution in Alloteropsis semialata.

Published in:

Journal of Experimental Botany, 2019, v. 70, n. 12, p. 3255, doi. 10.1093/jxb/erz149

By:

Dunning, Luke T;
Moreno-Villena, Jose J;
Lundgren, Marjorie R;
Dionora, Jacqueline;
Salazar, Paolo;
Adams, Claire;
Nyirenda, Florence;
Olofsson, Jill K;
Mapaura, Anthony;
Grundy, Isla M;
Kayombo, Canisius J;
Dunning, Lucy A;
Kentatchime, Fabrice;
Ariyarathne, Menaka;
Yakandawala, Deepthi;
Besnard, Guillaume;
Quick, W Paul;
Bräutigam, Andrea;
Osborne, Colin P;
Christin, Pascal-Antoine

Publication type:

Article

Gene duplication and dosage effects during the early emergence of C4 photosynthesis in the grass genus Alloteropsis.

Published in:

Journal of Experimental Botany, 2018, v. 69, n. 8, p. 1967, doi. 10.1093/jxb/ery029

By:

Bianconi, Matheus E;
Dunning, Luke T;
Moreno-Villena, Jose J;
Osborne, Colin P;
Christin, Pascal-Antoine

Publication type:

Article

Substitutions in the Glycogenin-1 Gene Are Associated with the Evolution of Endothermy in Sharks and Tunas.

Published in:

Genome Biology & Evolution, 2016, v. 8, n. 9, p. 3011, doi. 10.1093/gbe/evw211

By:

Ciezarek, Adam G.;
Dunning, Luke T.;
Jones, Catherine S.;
Noble, Leslie R.;
Humble, Emily;
Stefanni, Sergio S.;
Savolainen, Vincent

Publication type:

Article

The Genome of the “Great Speciator” Provides Insights into Bird Diversification.

Published in:

Genome Biology & Evolution, 2015, v. 7, n. 9, p. 2680, doi. 10.1093/gbe/evv168

By:

Cornetti, Luca;
Valente, Luis M.;
Dunning, Luke T.;
Quan, Xueping;
Black, Richard A.;
Hébert, Olivier;
Savolainen, Vincent

Publication type:

Article

Evidence of positive selection associated with placental loss in tiger sharks.

Published in:

BMC Evolutionary Biology, 2016, v. 16, p. 1, doi. 10.1186/s12862-016-0696-y

By:

Swift, Dominic G.;
Dunning, Luke T.;
Igea, Javier;
Brooks, Edward J.;
Jones, Catherine S.;
Noble, Leslie R.;
Ciezarek, Adam;
Humble, Emily;
Savolainen, Vincent

Publication type:

Article

Positive selection in glycolysis among Australasian stick insects.

Published in:

BMC Evolutionary Biology, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1471-2148-13-215

By:

Dunning, Luke T.;
Dennis, Alice B.;
Thomson, Geoffrey;
Sinclair, Brent J.;
Newcomb, Richard D.;
Buckley, Thomas R.

Publication type:

Article

Contrasting phylogeographic structures between freshwater lycopods and angiosperms in the British Isles.

Published in:

Botany Letters, 2018, v. 165, n. 3/4, p. 476, doi. 10.1080/23818107.2018.1505545

By:

Wood, Daniel P.;
Olofsson, Jill K.;
McKenzie, Scott W.;
Dunning, Luke T.

Publication type:

Article

The recent and rapid spread of Themeda triandra.

Published in:

Botany Letters, 2017, v. 164, n. 4, p. 327, doi. 10.1080/23818107.2017.1391120

By:

Dunning, Luke T.;
Liabot, Anne-Lise;
Olofsson, Jill K.;
Smith, Emma K.;
Vorontsova, Maria S.;
Besnard, Guillaume;
Simpson, Kimberley J.;
Lundgren, Marjorie R.;
Addicott, Eda;
Gallagher, Rachael V.;
Chu, Yingying;
Pennington, R. Toby;
Christin, Pascal-Antoine;
Lehmann, Caroline E. R.

Publication type:

Article

Morphological and genetic evidence suggest gene flow among native and naturalized mint species.

Published in:

American Journal of Botany, 2024, v. 111, n. 2, p. 1, doi. 10.1002/ajb2.16280

By:

Olofsson, Jill K.;
Tyler, Torbjörn;
Dunning, Luke T.;
Hjertson, Mats;
Rühling, Åke;
Hansen, Anders J.

Publication type:

Article

Reticulate evolution, lateral gene transfer, and innovation in plants.

Published in:

American Journal of Botany, 2020, v. 107, n. 4, p. 541, doi. 10.1002/ajb2.1452

By:

Dunning, Luke T.;
Christin, Pascal‐Antoine

Publication type:

Article

Rapid Parallel Adaptation to Anthropogenic Heavy Metal Pollution.

Published in:

Molecular Biology & Evolution, 2021, v. 38, n. 9, p. 3724, doi. 10.1093/molbev/msab141

By:

Papadopulos, Alexander S T;
Helmstetter, Andrew J;
Osborne, Owen G;
Comeault, Aaron A;
Wood, Daniel P;
Straw, Edward A;
Mason, Laurence;
Fay, Michael F;
Parker, Joe;
Dunning, Luke T;
Foote, Andrew D;
Smith, Rhian J;
Lighten, Jackie

Publication type:

Article

Lateral Gene Transfer Acts As an Evolutionary Shortcut to Efficient C4 Biochemistry.

Published in:

Molecular Biology & Evolution, 2020, v. 37, n. 11, p. 3094, doi. 10.1093/molbev/msaa143

By:

Phansopa, Chatchawal;
Dunning, Luke T;
Reid, James D;
Christin, Pascal-Antoine

Publication type:

Article

Highly Expressed Genes Are Preferentially Co-Opted for C4 Photosynthesis.

Published in:

Molecular Biology & Evolution, 2018, v. 35, n. 1, p. 94, doi. 10.1093/molbev/msx269

By:

Moreno-Villena, Jose J;
Dunning, Luke T;
Osborne, Colin P;
Christin, Pascal-Antoine

Publication type:

Article

The mechanisms underpinning lateral gene transfer between grasses.

Published in:

Plants, People, Planet, 2023, v. 5, n. 5, p. 672, doi. 10.1002/ppp3.10347

By:

Pereira, Lara;
Christin, Pascal‐Antoine;
Dunning, Luke T.

Publication type:

Article

Leaf anatomy explains the strength of C4 activity within the grass species Alloteropsis semialata.

Published in:

Plant, Cell & Environment, 2023, v. 46, n. 8, p. 2310, doi. 10.1111/pce.14607

By:

Alenazi, Ahmed S.;
Bianconi, Matheus E.;
Middlemiss, Ella;
Milenkovic, Vanja;
Curran, Emma V.;
Sotelo, Graciela;
Lundgren, Marjorie R.;
Nyirenda, Florence;
Pereira, Lara;
Christin, Pascal‐Antoine;
Dunning, Luke T.;
Osborne, Colin P.

Publication type:

Article

Upregulation of C4 characteristics does not consistently improve photosynthetic performance in intraspecific hybrids of a grass.

Published in:

Plant, Cell & Environment, 2022, v. 45, n. 5, p. 1398, doi. 10.1111/pce.14301

By:

Bianconi, Matheus E.;
Sotelo, Graciela;
Curran, Emma V.;
Milenkovic, Vanja;
Samaritani, Emanuela;
Dunning, Luke T.;
Bertolino, Lígia T.;
Osborne, Colin P.;
Christin, Pascal‐Antoine

Publication type:

Article

A new species of Vallisneria L. for Western Australia and recircumscription of V. triptera S.W.L.Jacobs & K.A.Frank.

Published in:

Telopea, 2024, v. 27, p. 29, doi. 10.7751/telopea17993

By:

Jobson, Richard W.;
Dunning, Luke T.

Publication type:

Article

Phylogenomics using low‐depth whole genome sequencing: A case study with the olive tribe.

Published in:

Molecular Ecology Resources, 2019, v. 19, n. 4, p. 877, doi. 10.1111/1755-0998.13016

By:

Olofsson, Jill K.;
Cantera, Isabel;
Van de Paer, Céline;
Hong‐Wa, Cynthia;
Zedane, Loubab;
Dunning, Luke T.;
Alberti, Adriana;
Christin, Pascal‐Antoine;
Besnard, Guillaume

Publication type:

Article

Extrachromosomal circular DNA as a vehicle to gene transfer in plants.

Published in:

Plant Physiology, 2023, v. 193, n. 1, p. 172, doi. 10.1093/plphys/kiad380

By:

Pereira, Lara;
Dunning, Luke T.

Publication type:

Article

Genome biogeography reveals the intraspecific spread of adaptive mutations for a complex trait.

Published in:

Molecular Ecology, 2016, v. 25, n. 24, p. 6107, doi. 10.1111/mec.13914

By:

Olofsson, Jill K.;
Bianconi, Matheus;
Besnard, Guillaume;
Dunning, Luke T.;
Lundgren, Marjorie R.;
Holota, Helene;
Vorontsova, Maria S.;
Hidalgo, Oriane;
Leitch, Ilia J.;
Nosil, Patrik;
Osborne, Colin P.;
Christin, Pascal‐Antoine

Publication type:

Article

Divergent transcriptional responses to low temperature among populations of alpine and lowland species of New Zealand stick insects ( Micrarchus).

Published in:

Molecular Ecology, 2014, v. 23, n. 11, p. 2712, doi. 10.1111/mec.12767

By:

Dunning, Luke T.;
Dennis, Alice B.;
Sinclair, Brent J.;
Newcomb, Richard D.;
Buckley, Thomas R.

Publication type:

Article

Alloteropsis semialata as a study system for C4 evolution in grasses.

Published in:

Annals of Botany, 2023, v. 132, n. 3, p. 365, doi. 10.1093/aob/mcad078

By:

Pereira, Lara;
Bianconi, Matheus E;
Osborne, Colin P;
Christin, Pascal-Antoine;
Dunning, Luke T

Publication type:

Article

Ecological speciation in sympatric palms: 3. Genetic map reveals genomic islands underlying species divergence in Howea.

Published in:

Evolution, 2019, v. 73, n. 9, p. 1986, doi. 10.1111/evo.13796

By:

Papadopulos, Alexander S. T.;
Igea, Javier;
Dunning, Luke T.;
Osborne, Owen G.;
Quan, Xueping;
Pellicer, Jaume;
Turnbull, Colin;
Hutton, Ian;
Baker, William J.;
Butlin, Roger K.;
Savolainen, Vincent

Publication type:

Article

Introgression and repeated co-option facilitated the recurrent emergence of C4 photosynthesis among close relatives.

Published in:

Evolution, 2017, v. 71, n. 6, p. 1541, doi. 10.1111/evo.13250

By:

Dunning, Luke T.;
Lundgren, Marjorie R.;
Moreno‐Villena, Jose J.;
Namaganda, Mary;
Edwards, Erika J.;
Nosil, Patrik;
Osborne, Colin P.;
Christin, Pascal‐Antoine

Publication type:

Article

Complex evolutionary history of two ecologically significant grass genera, Themeda and Heteropogon (Poaceae: Panicoideae: Andropogoneae).

Published in:

Botanical Journal of the Linnean Society, 2021, v. 196, n. 4, p. 437, doi. 10.1093/botlinnean/boab008

By:

Arthan, Watchara;
Dunning, Luke T;
Besnard, Guillaume;
Manzi, Sophie;
Kellogg, Elizabeth A;
Hackel, Jan;
Lehmann, Caroline E R;
Mitchley, Jonathan;
Vorontsova, Maria S

Publication type:

Article

Broad-scale amplification of matK for DNA barcoding plants, a technical note.

Published in:

Botanical Journal of the Linnean Society, 2010, v. 164, n. 1, p. 1, doi. 10.1111/j.1095-8339.2010.01071.x

By:

Dunning, Luke T.;
Savolainen, Vincent

Publication type:

Article

Using functional traits and phylogenetic trees to examine the assembly of tropical tree communities.

Published in:

Journal of Ecology, 2012, v. 100, n. 3, p. 690, doi. 10.1111/j.1365-2745.2012.01966.x

By:

Baraloto, Christopher;
Hardy, Olivier J.;
Paine, C. E. Timothy;
Dexter, Kyle G.;
Cruaud, Corinne;
Dunning, Luke T.;
Gonzalez, Mailyn-Adriana;
Molino, Jean-François;
Sabatier, Daniel;
Savolainen, Vincent;
Chave, Jerome

Publication type:

Article

Parallel molecular routes to cold adaptation in eight genera of New Zealand stick insects.

Published in:

Scientific Reports, 2015, p. 13965, doi. 10.1038/srep13965

By:

Dennis, Alice B.;
Dunning, Luke T.;
Sinclair, Brent J.;
Buckley, Thomas R.

Publication type:

Article

C4 anatomy can evolve via a single developmental change.

Published in:

Ecology Letters, 2019, v. 22, n. 2, p. 302, doi. 10.1111/ele.13191

By:

Lundgren, Marjorie R.;
Dunning, Luke T.;
Olofsson, Jill K.;
Moreno‐Villena, Jose J.;
Bouvier, Jacques W.;
Sage, Tammy L.;
Khoshravesh, Roxana;
Sultmanis, Stefanie;
Stata, Matt;
Ripley, Brad S.;
Vorontsova, Maria S.;
Besnard, Guillaume;
Adams, Claire;
Cuff, Nicholas;
Mapaura, Anthony;
Bianconi, Matheus E.;
Long, Christine M.;
Christin, Pascal‐Antoine;
Osborne, Colin P.;
Pannell, John

Publication type:

Article

Works by Dunning, Luke T.

A nuclear phylogenomic tree of grasses (Poaceae) recovers current classification despite gene tree incongruence.

Identifying genomic regions associated with C<sub>4</sub> photosynthetic activity and leaf anatomy in Alloteropsis semialata.

C<sub>4</sub> photosynthesis provided an immediate demographic advantage to populations of the grass Alloteropsis semialata.

Lateral gene transfer generates accessory genes that accumulate at different rates within a grass lineage.

Widespread lateral gene transfer among grasses.

Hybridisation and chloroplast capture between distinct Themeda triandra lineages in Australia.

Low dispersal and ploidy differences in a grass maintain photosynthetic diversity despite gene flow and habitat overlap.

C4 trees have a broader niche than their close C3 relatives.

Key changes in gene expression identified for different stages of C 4 evolution in Alloteropsis semialata.

Gene duplication and dosage effects during the early emergence of C<sub>4</sub> photosynthesis in the grass genus Alloteropsis.

Substitutions in the Glycogenin-1 Gene Are Associated with the Evolution of Endothermy in Sharks and Tunas.

The Genome of the “Great Speciator” Provides Insights into Bird Diversification.

Evidence of positive selection associated with placental loss in tiger sharks.

Positive selection in glycolysis among Australasian stick insects.

Contrasting phylogeographic structures between freshwater lycopods and angiosperms in the British Isles.

The recent and rapid spread of Themeda triandra.

Morphological and genetic evidence suggest gene flow among native and naturalized mint species.

Reticulate evolution, lateral gene transfer, and innovation in plants.

Rapid Parallel Adaptation to Anthropogenic Heavy Metal Pollution.

Lateral Gene Transfer Acts As an Evolutionary Shortcut to Efficient C<sub>4</sub> Biochemistry.

Highly Expressed Genes Are Preferentially Co-Opted for C<sub>4</sub> Photosynthesis.

The mechanisms underpinning lateral gene transfer between grasses.

Leaf anatomy explains the strength of C<sub>4</sub> activity within the grass species Alloteropsis semialata.

Upregulation of C<sub>4</sub> characteristics does not consistently improve photosynthetic performance in intraspecific hybrids of a grass.

A new species of Vallisneria L. for Western Australia and recircumscription of V. triptera S.W.L.Jacobs & K.A.Frank.

Phylogenomics using low‐depth whole genome sequencing: A case study with the olive tribe.

Extrachromosomal circular DNA as a vehicle to gene transfer in plants.

Genome biogeography reveals the intraspecific spread of adaptive mutations for a complex trait.

Divergent transcriptional responses to low temperature among populations of alpine and lowland species of New Zealand stick insects ( Micrarchus).

Alloteropsis semialata as a study system for C<sub>4</sub> evolution in grasses.

Ecological speciation in sympatric palms: 3. Genetic map reveals genomic islands underlying species divergence in Howea.

Introgression and repeated co-option facilitated the recurrent emergence of C<sub>4</sub> photosynthesis among close relatives.

Complex evolutionary history of two ecologically significant grass genera, Themeda and Heteropogon (Poaceae: Panicoideae: Andropogoneae).

Broad-scale amplification of matK for DNA barcoding plants, a technical note.

Using functional traits and phylogenetic trees to examine the assembly of tropical tree communities.

Parallel molecular routes to cold adaptation in eight genera of New Zealand stick insects.

C<sub>4</sub> anatomy can evolve via a single developmental change.