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Accurate, Efficient and User-Friendly Mutation Calling and Sample Identification for TILLING Experiments.
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- Frontiers in Genetics, 2021, v. 11, p. N.PAG, doi. 10.3389/fgene.2021.624513
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- Article
Genetic mapping for agronomic traits in a MAGIC population of common bean (Phaseolus vulgaris L.) under drought conditions.
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- BMC Genomics, 2020, v. 21, n. 1, p. N.PAG, doi. 10.1186/s12864-020-07213-6
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- Article
Functional divergence of gene duplicates through ectopic recombination.
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- EMBO Reports, 2012, v. 13, n. 12, p. 1145, doi. 10.1038/embor.2012.157
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- Article
EXPLoRA-web: linkage analysis of quantitative trait loci using bulk segregant analysis.
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- Nucleic Acids Research, 2016, v. 44, n. W1, p. W142, doi. 10.1093/nar/gkw298
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- Article
Large-scale analysis of tandem repeat variability in the human genome.
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- Nucleic Acids Research, 2014, v. 42, n. 9, p. 5728, doi. 10.1093/nar/gku212
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- Article
An integrated framework for discovery and genotyping of genomic variants from high-throughput sequencing experiments.
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- Nucleic Acids Research, 2014, v. 42, n. 6, p. e44, doi. 10.1093/nar/gkt1381
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- Article
Fosmid-based whole genome haplotyping of a HapMap trio child: evaluation of Single Individual Haplotyping techniques.
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- Nucleic Acids Research, 2012, v. 40, n. 5, p. 2041, doi. 10.1093/nar/gkr1042
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- Article
PrimerHunter: a primer design tool for PCR-based virus subtype identification.
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- Nucleic Acids Research, 2009, v. 37, n. 8, p. 2483, doi. 10.1093/nar/gkp073
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- Article
Phylogenomic approaches reveal a robust time-scale phylogeny of the Terminal Fusarium Clade.
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- IMA Fungus, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s43008-024-00147-8
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- Article
Whole Genome Sequencing of Elite Rice Cultivars as a Comprehensive Information Resource for Marker Assisted Selection.
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- PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0124617
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Phenotypic and genotypic characterization of Leishmania (Viannia) braziliensis clinical isolates in Colombia.
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- Actualidades Biológicas, 2022, v. 44, p. 52
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- Article
Changes at the genomic level of clinical isolates of Leishmania (Viannia) braziliensis given by in vitro maintenance.
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- Actualidades Biológicas, 2022, v. 44, p. 51
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- Article
Use of the Oxford Nanopore platform to obtain maxicircles (kDNA) of Colombian isolates of Leishmania (Viannia) braziliensis for genomic and evolutionary studies.
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- Actualidades Biológicas, 2022, v. 44, p. 50
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- Article
Sequencing of Colombian strains of Leishmania (Viannia) braziliensis using Oxford Nanopore technology.
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- Actualidades Biológicas, 2022, v. 44, p. 49
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- Article
Obtaining the mitochondrial genome (kDNA) of a strain of Trypanosoma cruzi from endemic areas of Chagas disease in the department of Tolima (Colombia) for genomic and evolutionary studies.
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- Actualidades Biológicas, 2022, v. 44, p. 36
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- Article
Assembly of the genome of a Colombian strain of Trypanosoma cruzi I (Tel) from the department of Tolima as a tool for the analysis of genetic diversity and evolution.
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- Actualidades Biológicas, 2022, v. 44, p. 35
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- Article
Bioinformatic analysis of genotype by sequencing (GBS) data with NGSEP.
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- BMC Genomics, 2016, v. 17, p. 539, doi. 10.1186/s12864-016-2827-7
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- Article
Efficient homology‐based annotation of transposable elements using minimizers.
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- Applications in Plant Sciences, 2023, v. 11, n. 4, p. 1, doi. 10.1002/aps3.11520
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- Article
Comprehensive Time-Series Analysis of the Gene Expression Profile in a Susceptible Cultivar of Tree Tomato (Solanum betaceum) During the Infection of Phytophthora betacei.
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- Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.730251
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- Article
Unraveling the Genome of a High Yielding Colombian Sugarcane Hybrid.
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- Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.694859
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- Article
The sole introduction of two single-point mutations establishes glycerol utilization in Saccharomyces cerevisiae CEN.PK derivatives.
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- Biotechnology for Biofuels, 2017, v. 10, p. 1, doi. 10.1186/s13068-016-0696-6
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- Article
Linkage disequilibrium based genotype calling from low-coverage shotgun sequencing reads.
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- BMC Bioinformatics, 2011, v. 12, n. Suppl 1, p. 1, doi. 10.1186/1471-2105-12-S1-S53
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- Article
New algorithms for accurate and efficient de novo genome assembly from long DNA sequencing reads.
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- Life Science Alliance, 2023, v. 6, n. 5, p. 1, doi. 10.26508/lsa.202201719
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Colombia's cyberinfrastructure for biodiversity: Building data infrastructure in emerging countries to foster socioeconomic growth.
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- Plants, People, Planet, 2020, v. 2, n. 3, p. 229, doi. 10.1002/ppp3.10086
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- Article
Identification of Cassava MicroRNAs under Abiotic Stress.
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- International Journal of Genomics, 2013, p. 1, doi. 10.1155/2013/857986
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- Article
Combining Image Analysis, Genome Wide Association Studies and Different Field Trials to Reveal Stable Genetic Regions Related to Panicle Architecture and the Number of Spikelets per Panicle in Rice.
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- Frontiers in Plant Science, 2016, p. 1, doi. 10.3389/fpls.2016.01384
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- Article
Identification of multiple interacting alleles conferring low glycerol and high ethanol yield in Saccharomyces cerevisiae ethanolic fermentation.
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- Biotechnology for Biofuels, 2013, v. 6, n. 1, p. 1, doi. 10.1186/1754-6834-6-87
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- Article
Análisis de variación estructural genómica de aislamientos colombianos de Leishmania (Viannia) braziliensis.
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- Biomédica: Revista del Instituto Nacional de Salud, 2022, v. 42, p. 212
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- Article
Ensamblaje del genoma nuclear y mitocondrial (kDNA) de una cepa colombiana de Trypanosoma cruzi I (TcI) procedente del departamento del Tolima, empleando lecturas largas como herramienta para el análisis de variabilidad genética y evolución
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- Biomédica: Revista del Instituto Nacional de Salud, 2022, v. 42, p. 132
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- Article
Using RNA-seq to characterize pollen–stigma interactions for pollination studies.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-85887-y
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- Article
Loss of pod strings in common bean is associated with gene duplication, retrotransposon insertion and overexpression of PvIND.
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- New Phytologist, 2022, v. 235, n. 6, p. 2454, doi. 10.1111/nph.18319
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- Article
QTL mapping for pod quality and yield traits in snap bean (Phaseolus vulgaris L.).
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- Frontiers in Plant Science, 2024, p. 1, doi. 10.3389/fpls.2024.1422957
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- Article
Translocation of a parthenogenesis gene candidate to an alternate carrier chromosome in apomictic Brachiaria humidicola.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-018-5392-4
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- Article
Comparative Polygenic Analysis of Maximal Ethanol Accumulation Capacity and Tolerance to High Ethanol Levels of Cell Proliferation in Yeast.
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- PLoS Genetics, 2013, v. 9, n. 6, p. 1, doi. 10.1371/journal.pgen.1003548
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Machine learning models for accurate prioritization of variants of uncertain significance.
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- Human Mutation, 2022, v. 43, n. 4, p. 449, doi. 10.1002/humu.24339
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- Article
Selection signatures and population dynamics of transposable elements in lima bean.
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- Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05144-y
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Genomic Analysis of Colombian Leishmania panamensis strains with different level of virulence.
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- Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-35778-6
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- Article
NGSEP 4: Efficient and accurate identification of orthogroups and whole‐genome alignment.
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- Molecular Ecology Resources, 2023, v. 23, n. 3, p. 712, doi. 10.1111/1755-0998.13737
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- Article
Robust and efficient software for reference‐free genomic diversity analysis of genotyping‐by‐sequencing data on diploid and polyploid species.
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- Molecular Ecology Resources, 2022, v. 22, n. 1, p. 439, doi. 10.1111/1755-0998.13477
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- Article
Improved linkage analysis of Quantitative Trait Loci using bulk segregants unveils a novel determinant of high ethanol tolerance in yeast.
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- BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-207
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- Article
Towards accurate detection and genotyping of expressed variants from whole transcriptome sequencing data.
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- BMC Genomics, 2012, v. 13, n. Suppl 2, p. 1, doi. 10.1186/1471-2164-13-S2-S6
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- Article
NGSEP3: accurate variant calling across species and sequencing protocols.
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- Bioinformatics, 2019, v. 35, n. 22, p. 4716, doi. 10.1093/bioinformatics/btz275
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A phased genome assembly of a Colombian Trypanosoma cruzi TcI strain and the evolution of gene families.
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- Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-52449-x
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- Article
Comprehensive genomic resources related to domestication and crop improvement traits in Lima bean.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-20921-1
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- Article