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A Whole Methylome CpG-SNP Association Study of Psychosis in Blood and Brain Tissue.
- Published in:
- Schizophrenia Bulletin, 2016, v. 42, n. 4, p. 1018, doi. 10.1093/schbul/sbv182
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- Publication type:
- Article
Trans-Ethnic Mapping of BANK1 Identifies Two Independent SLE-Risk Linkage Groups Enriched for Co-Transcriptional Splicing Marks.
- Published in:
- International Journal of Molecular Sciences, 2018, v. 19, n. 8, p. 2331, doi. 10.3390/ijms19082331
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- Publication type:
- Article
Improving sensitivity of linear regression-based cell type-specific differential expression deconvolution with per-gene vs. global significance threshold.
- Published in:
- BMC Bioinformatics, 2016, v. 17, p. 163, doi. 10.1186/s12859-016-1226-z
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- Publication type:
- Article
Proceedings of the 2016 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.
- Published in:
- 2016
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- Publication type:
- Proceeding
Characterizing the efficacy of cancer therapeutics in patient-derived xenograft models of metastatic breast cancer.
- Published in:
- Breast Cancer Research & Treatment, 2018, v. 170, n. 2, p. 221, doi. 10.1007/s10549-018-4748-4
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- Publication type:
- Article
Sjögren's Syndrome Minor Salivary Gland CD4+ Memory T Cells Associate with Glandular Disease Features and Have a Germinal Center T Follicular Helper Transcriptional Profile.
- Published in:
- Journal of Clinical Medicine, 2020, v. 9, n. 7, p. 2164, doi. 10.3390/jcm9072164
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- Publication type:
- Article
Rewiring of the 3D genome during acquisition of carboplatin resistance in a triple-negative breast cancer patient-derived xenograft.
- Published in:
- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-32568-7
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- Publication type:
- Article
Publisher Correction: Rewiring of the 3D genome during acquisition of carboplatin resistance in a triple-negative breast cancer patient-derived xenograft.
- Published in:
- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-33284-y
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- Publication type:
- Article
Rewiring of the 3D genome during acquisition of carboplatin resistance in a triple-negative breast cancer patient-derived xenograft.
- Published in:
- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-32568-7
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- Publication type:
- Article
Transcriptomic changes underlying EGFR inhibitor resistance in human and mouse models of basal-like breast cancer.
- Published in:
- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-25541-3
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- Publication type:
- Article
Variants at multiple loci implicated in both innate and adaptive immune responses are associated with Sjögren's syndrome.
- Published in:
- Nature Genetics, 2013, v. 45, n. 11, p. 1284, doi. 10.1038/ng.2792
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- Publication type:
- Article
Identification of breast cancer associated variants that modulate transcription factor binding.
- Published in:
- PLoS Genetics, 2017, v. 13, n. 9, p. 1, doi. 10.1371/journal.pgen.1006761
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- Publication type:
- Article
matchRanges: generating null hypothesis genomic ranges via covariate-matched sampling.
- Published in:
- Bioinformatics, 2023, v. 39, n. 5, p. 1, doi. 10.1093/bioinformatics/btad197
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- Publication type:
- Article
bootRanges: flexible generation of null sets of genomic ranges for hypothesis testing.
- Published in:
- Bioinformatics, 2023, v. 39, n. 5, p. 1, doi. 10.1093/bioinformatics/btad190
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- Publication type:
- Article
preciseTAD: a transfer learning framework for 3D domain boundary prediction at base-pair resolution.
- Published in:
- Bioinformatics, 2022, v. 38, n. 3, p. 621, doi. 10.1093/bioinformatics/btab743
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- Publication type:
- Article
Chromatin conformation capture (Hi-C) sequencing of patient-derived xenografts: analysis guidelines.
- Published in:
- GigaScience, 2021, v. 10, n. 4, p. 1, doi. 10.1093/gigascience/giab022
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- Publication type:
- Article
A Comprehensive and Universal Method for Assessing the Performance of Differential Gene Expression Analyses.
- Published in:
- PLoS ONE, 2010, v. 5, n. 9, p. 1, doi. 10.1371/journal.pone.0012657
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- Publication type:
- Article
Dysregulation of Type I Interferon (IFN-I) Signaling: A Potential Contributor to Racial Disparity in Hepatocellular Carcinoma (HCC).
- Published in:
- Cancers, 2023, v. 15, n. 17, p. 4283, doi. 10.3390/cancers15174283
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- Publication type:
- Article
Stratification of Tamoxifen Synergistic Combinations for the Treatment of ER+ Breast Cancer.
- Published in:
- Cancers, 2023, v. 15, n. 12, p. 3179, doi. 10.3390/cancers15123179
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- Publication type:
- Article
Discovering Synergistic Compounds with BYL-719 in PI3K Overactivated Basal-like PDXs.
- Published in:
- Cancers, 2023, v. 15, n. 5, p. 1582, doi. 10.3390/cancers15051582
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- Publication type:
- Article
Unmasking BCL-2 Addiction in Synovial Sarcoma by Overcoming Low NOXA.
- Published in:
- Cancers, 2021, v. 13, n. 10, p. 2310, doi. 10.3390/cancers13102310
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- Publication type:
- Article
Restoring the DREAM Complex Inhibits the Proliferation of High-Risk HPV Positive Human Cells.
- Published in:
- Cancers, 2021, v. 13, n. 3, p. 489, doi. 10.3390/cancers13030489
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- Publication type:
- Article
Anillin regulates breast cancer cell migration, growth, and metastasis by non-canonical mechanisms involving control of cell stemness and differentiation.
- Published in:
- 2020
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- Publication type:
- journal article
Separation of breast cancer and organ microenvironment transcriptomes in metastases.
- Published in:
- 2019
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- Publication type:
- journal article
Proceedings of the 2015 midsouth computational biology and bioinformatics society (MCBIOS) conference.
- Published in:
- BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/1471-2105-16-S13-S1
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- Publication type:
- Article
Proceedings of the 2014 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.
- Published in:
- BMC Bioinformatics, 2014, v. 15, n. Suppl 11, p. 1, doi. 10.1186/1471-2105-15-S11-I1
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- Publication type:
- Article
mirCoX: a database of miRNA-mRNA expression correlations derived from RNA-seq meta-analysis.
- Published in:
- BMC Bioinformatics, 2013, v. 14, n. Suppl 14, p. 1, doi. 10.1186/1471-2105-14-S14-S17
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- Publication type:
- Article
Systematic classification of non-coding RNAs by epigenomic similarity.
- Published in:
- BMC Bioinformatics, 2013, v. 14, n. Suppl 14, p. 1, doi. 10.1186/1471-2105-14-S14-S2
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- Publication type:
- Article
Proceedings of the 2013 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.
- Published in:
- 2013
- By:
- Publication type:
- Proceeding
Proceedings of the 2012 MidSouth computational biology and bioinformatics society (MCBIOS) conference.
- Published in:
- 2012
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- Publication type:
- Proceeding
High-throughput processing and normalization of one-color microarrays for transcriptional metaanalyses.
- Published in:
- BMC Bioinformatics, 2011, v. 12, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-12-S10-S2
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- Publication type:
- Article
Predicting gene ontology from a global metaanalysis of 1-color microarray experiments.
- Published in:
- BMC Bioinformatics, 2011, v. 12, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-12-S10-S14
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- Publication type:
- Article
Proceedings of the 2011 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.
- Published in:
- 2011
- By:
- Publication type:
- Proceeding
From microarray to biology: an integrated experimental, statistical and in silico analysis of how the extracellular matrix modulates the phenotype of cancer cells.
- Published in:
- BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-S9-S4
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- Publication type:
- Article
Systems biology approach for mapping the response of human urothelial cells to infection by Enterococcus faecalis.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 1, doi. 10.1186/1471-2105-8-S7-S2
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- Publication type:
- Article
The curcuminoid CLEFMA selectively induces cell death in H441 lung adenocarcinoma cells via oxidative stress.
- Published in:
- Investigational New Drugs, 2012, v. 30, n. 2, p. 558, doi. 10.1007/s10637-010-9610-4
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- Publication type:
- Article
Genome-wide analysis of hepatic DNA methylation reveals impact of epigenetic aging on xenobiotic metabolism and transport genes in an aged mouse model.
- Published in:
- GeroScience, 2024, v. 46, n. 6, p. 5967, doi. 10.1007/s11357-024-01137-9
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- Publication type:
- Article
DNA methylation and histone acetylation changes to cytochrome P450 2E1 regulation in normal aging and impact on rates of drug metabolism in the liver.
- Published in:
- GeroScience, 2020, v. 42, n. 3, p. 819, doi. 10.1007/s11357-020-00181-5
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- Publication type:
- Article
Gut microbiota manipulation during the prepubertal period shapes behavioral abnormalities in a mouse neurodevelopmental disorder model.
- Published in:
- Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-61635-6
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- Publication type:
- Article
Single‐cell transcriptional atlas of human breast cancers and model systems.
- Published in:
- Clinical & Translational Medicine, 2024, v. 14, n. 10, p. 1, doi. 10.1002/ctm2.70044
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- Publication type:
- Article
Oncogenic B-Myb Is Associated With Deregulation of the DREAM-Mediated Cell Cycle Gene Expression Program in High Grade Serous Ovarian Carcinoma Clinical Tumor Samples.
- Published in:
- Frontiers in Oncology, 2021, v. 11, p. N.PAG, doi. 10.3389/fonc.2021.637193
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- Publication type:
- Article
TADCompare: An R Package for Differential and Temporal Analysis of Topologically Associated Domains.
- Published in:
- Frontiers in Genetics, 2020, p. 1, doi. 10.3389/fgene.2020.00158
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- Publication type:
- Article
Correction to: SpectralTAD: an R package for defining a hierarchy of topologically associated domains using spectral clustering.
- Published in:
- 2020
- By:
- Publication type:
- Correction Notice
SpectralTAD: an R package for defining a hierarchy of topologically associated domains using spectral clustering.
- Published in:
- BMC Bioinformatics, 2020, v. 21, n. 1, p. N.PAG, doi. 10.1186/s12859-020-03652-w
- By:
- Publication type:
- Article
SpectralTAD: an R package for defining a hierarchy of topologically associated domains using spectral clustering.
- Published in:
- BMC Bioinformatics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12859-020-03652-w
- By:
- Publication type:
- Article
Disease classification: from phenotypic similarity to integrative genomics and beyond.
- Published in:
- Briefings in Bioinformatics, 2019, v. 20, n. 5, p. 1769, doi. 10.1093/bib/bby049
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- Publication type:
- Article
High density methylation QTL analysis in human blood via next-generation sequencing of the methylated genomic DNA fraction.
- Published in:
- Genome Biology, 2015, v. 16, p. 291, doi. 10.1186/s13059-015-0842-7
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- Publication type:
- Article
Differential effects of selective frankincense (Ru Xiang) essential oil versus non-selective sandalwood (Tan Xiang) essential oil on cultured bladder cancer cells: a microarray and bioinformatics study.
- Published in:
- Chinese Medicine, 2014, v. 9, n. 1, p. 1, doi. 10.1186/1749-8546-9-18
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- Publication type:
- Article
Unique patterns of molecular profiling between human prostate cancer LNCaP and PC-3 cells.
- Published in:
- Prostate, 2009, v. 69, n. 10, p. 1077, doi. 10.1002/pros.20960
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- Publication type:
- Article
Epigenetic Reprogramming in Naive CD4+ T Cells Favoring T Cell Activation and Non-Th1 Effector T Cell Immune Response as an Early Event in Lupus Flares.
- Published in:
- Arthritis & Rheumatology, 2016, v. 68, n. 9, p. 2200, doi. 10.1002/art.39720
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- Publication type:
- Article