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Phylogenetic Analysis of Viroid and Viroid-Like Satellite RNAs from Plants: A Reassessment.
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- Journal of Molecular Evolution, 2001, v. 53, n. 2, p. 155, doi. 10.1007/s002390010203
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- Article
Whole exome sequencing of Rett syndrome-like patients reveals the mutational diversity of the clinical phenotype.
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- Human Genetics, 2016, v. 135, n. 12, p. 1343, doi. 10.1007/s00439-016-1721-3
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- Article
Implementing Personalized Medicine in COVID-19 in Andalusia: An Opportunity to Transform the Healthcare System.
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- Journal of Personalized Medicine, 2021, v. 11, n. 6, p. 475, doi. 10.3390/jpm11060475
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- Article
Mutational Characterization of Cutaneous Melanoma Supports Divergent Pathways Model for Melanoma Development.
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- Cancers, 2021, v. 13, n. 20, p. 5219, doi. 10.3390/cancers13205219
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- Article
Early Transcriptional Defense Responses in Arabidopsis Cell Suspension Culture under High-Light Conditions.
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- Plant Physiology, 2011, v. 156, n. 3, p. 1439, doi. 10.1104/pp.111.177766
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- Article
Involvement of a citrus meiotic recombination TTC-repeat motif in the formation of gross deletions generated by ionizing radiation and MULE activation.
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- BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1280-3
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- Article
Profiling the venom gland transcriptomes of Costa Rican snakes by 454 pyrosequencing.
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- BMC Genomics, 2011, v. 12, n. 1, p. 259, doi. 10.1186/1471-2164-12-259
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- Article
Molecular and phylogenetic characterization of the monkeypox outbreak in the South of Spain.
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- Health Science Reports, 2024, v. 7, n. 3, p. 1, doi. 10.1002/hsr2.1965
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- Article
Differential metabolic activity and discovery of therapeutic targets using summarized metabolic pathway models.
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- NPJ Systems Biology & Applications, 2019, v. 5, n. 1, p. N.PAG, doi. 10.1038/s41540-019-0087-2
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- Article
microRNAs‐mediated regulation of insulin signaling in white adipose tissue during aging: Role of caloric restriction.
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- Aging Cell, 2023, v. 22, n. 11, p. 1, doi. 10.1111/acel.13919
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- Article
Author Correction: COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms.
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- 2020
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- Correction Notice
COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms.
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- Scientific Data, 2020, v. 7, n. 1, p. 1, doi. 10.1038/s41597-020-0477-8
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- Article
Assessing dissimilarity of genes by comparing their RNAse A mismatch cleavage patterns.
- Published in:
- Genetics, 1996, v. 144, n. 4, p. 1975, doi. 10.1093/genetics/144.4.1975
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- Publication type:
- Article
SigPrimedNet: A Signaling-Informed Neural Network for scRNA-seq Annotation of Known and Unknown Cell Types.
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- Biology (2079-7737), 2023, v. 12, n. 4, p. 579, doi. 10.3390/biology12040579
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- Article
Integrating transcriptomic and metabolomic analysis to understand natural leaf senescence in sunflower.
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- Plant Biotechnology Journal, 2016, v. 14, n. 2, p. 719, doi. 10.1111/pbi.12422
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- Article
HGVA: the Human Genome Variation Archive.
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- Nucleic Acids Research, 2017, v. 45, n. W1, p. W189, doi. 10.1093/nar/gkx445
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- Article
Actionable pathways: interactive discovery of therapeutic targets using signaling pathway models.
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- Nucleic Acids Research, 2016, v. 44, n. W1, p. W212, doi. 10.1093/nar/gkw369
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- Article
Assessing the impact of mutations found in next generation sequencing data over human signaling pathways.
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- Nucleic Acids Research, 2015, v. 43, n. W1, p. W270, doi. 10.1093/nar/gkv349
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- Article
Babelomics 5.0: functional interpretation for new generations of genomic data.
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- Nucleic Acids Research, 2015, v. 43, n. W1, p. W117, doi. 10.1093/nar/gkv384
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- Publication type:
- Article
PTMcode v2: a resource for functional associations of post-translational modifications within and between proteins.
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- Nucleic Acids Research, 2015, v. 43, n. D1, p. D494, doi. 10.1093/nar/gku1081
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- Publication type:
- Article
A web-based interactive framework to assist in the prioritization of disease candidate genes in whole-exome sequencing studies.
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- Nucleic Acids Research, 2014, v. 42, n. W1, p. W88
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- Publication type:
- Article
A web tool for the design and management of panels of genes for targeted enrichment and massive sequencing for clinical applications.
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- Nucleic Acids Research, 2014, v. 42, n. W1, p. W83
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- Publication type:
- Article
Inferring the functional effect of gene expression changes in signaling pathways.
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- Nucleic Acids Research, 2013, v. 41, p. W213, doi. 10.1093/nar/gkt451
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- Publication type:
- Article
Genome Maps, a new generation genome browser.
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- Nucleic Acids Research, 2013, v. 41, p. W41, doi. 10.1093/nar/gkt530
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- Article
Graph-theoretical comparison of normal and tumor networks in identifying BRCA genes.
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- BMC Systems Biology, 2017, v. 11, p. 1, doi. 10.1186/s12918-017-0495-0
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- Article
Understanding disease mechanisms with models of signaling pathway activities.
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- BMC Systems Biology, 2014, v. 8, n. 1, p. 1, doi. 10.1186/s12918-014-0121-3
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- Publication type:
- Article
Pathway network inference from gene expression data.
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- BMC Systems Biology, 2014, v. 8, n. Suppl 2, p. 1, doi. 10.1186/1752-0509-8-S2-S7
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- Publication type:
- Article
The Prognostic Relevance of the Nonstructural 5A Gene Interferon Sensitivity Determining Region Is Different in Infections with Genotype 1b and 3a Isolates of Hepatitis C Virus.
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- Journal of Infectious Diseases, 1998, v. 177, n. 4, p. 839
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- Publication type:
- Article
A versatile workflow to integrate RNA-seq genomic and transcriptomic data into mechanistic models of signaling pathways.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008748
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- Article
SMN1 copy‐number and sequence variant analysis from next‐generation sequencing data.
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- Human Mutation, 2020, v. 41, n. 12, p. 2073, doi. 10.1002/humu.24120
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- Article
Mechanistic Models of Signaling Pathways Reveal the Drug Action Mechanisms behind Gender-Specific Gene Expression for Cancer Treatments.
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- Cells (2073-4409), 2020, v. 9, n. 7, p. 1579, doi. 10.3390/cells9071579
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- Article
Phylogenetic Analysis of the 2020 West Nile Virus (WNV) Outbreak in Andalusia (Spain).
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- Viruses (1999-4915), 2021, v. 13, n. 5, p. 836, doi. 10.3390/v13050836
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- Article
Whole exome sequencing coupled with unbiased functional analysis reveals new Hirschsprung disease genes.
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- Genome Biology, 2017, v. 18, p. 1, doi. 10.1186/s13059-017-1174-6
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- Article
A framework for genomic sequencing on clusters of multicore and manycore processors.
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- International Journal of High Performance Computing Applications, 2018, v. 32, n. 3, p. 393, doi. 10.1177/1094342016653243
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- Article
Controlled Ovarian Stimulation Induces a Functional Genomic Delay of the Endometrium with Potential Clinical Implications.
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- Journal of Clinical Endocrinology & Metabolism, 2008, v. 93, n. 11, p. 4500, doi. 10.1210/jc.2008-0588
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- Article
An Evolutionary Trade-Off between Protein Turnover Rate and Protein Aggregation Favors a Higher Aggregation Propensity in Fast Degrading Proteins.
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- PLoS Computational Biology, 2011, v. 7, n. 6, p. 1, doi. 10.1371/journal.pcbi.1002090
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- Article
Natural Selection on Functional Modules, a Genome-Wide Analysis.
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- PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001093
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- Article
Selection upon Genome Architecture: Conservation of Functional Neighborhoods with Changing Genes.
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- PLoS Computational Biology, 2010, v. 6, n. 10, p. 1, doi. 10.1371/journal.pcbi.1000953
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- Article
Positive Selection, Relaxation, and Acceleration in the Evolution of the Human and Chimp Genome.
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- PLoS Computational Biology, 2006, v. 2, n. 4, p. e38, doi. 10.1371/journal.pcbi.0020038
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- Article
Reference genome assessment from a population scale perspective: an accurate profile of variability and noise.
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- Bioinformatics, 2017, v. 33, n. 22, p. 3511, doi. 10.1093/bioinformatics/btx482
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- Publication type:
- Article
Web-based network analysis and visualization using CellMaps.
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- Bioinformatics, 2016, v. 32, n. 19, p. 3041, doi. 10.1093/bioinformatics/btw332
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- Article
Integrated gene set analysis for microRNA studies.
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- Bioinformatics, 2016, v. 32, n. 18, p. 2809, doi. 10.1093/bioinformatics/btw334
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- Publication type:
- Article
A parallel and sensitive software tool for methylation analysis on multicore platforms.
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- Bioinformatics, 2015, v. 31, n. 19, p. 3130, doi. 10.1093/bioinformatics/btv357
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- Publication type:
- Article
Using mechanistic models for the clinical interpretation of complex genomic variation.
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- Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-55454-7
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- Publication type:
- Article
The activation of the Sox2 RR2 pluripotency transcriptional reporter in human breast cancer cell lines is dynamic and labels cells with higher tumorigenic potential.
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- Frontiers in Oncology, 2014, v. 4, p. 1, doi. 10.3389/fonc.2014.00308
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- Article
Characterization of the Common Genetic Variation in the Spanish Population of Navarre.
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- Genes, 2024, v. 15, n. 5, p. 585, doi. 10.3390/genes15050585
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- Article
Transcriptomic Analysis of a Diabetic Skin-Humanized Mouse Model Dissects Molecular Pathways Underlying the Delayed Wound Healing Response.
- Published in:
- Genes, 2021, v. 12, n. 1, p. 47, doi. 10.3390/genes12010047
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- Publication type:
- Article
A comprehensive database for integrated analysis of omics data in autoimmune diseases.
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- BMC Bioinformatics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12859-021-04268-4
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- Article
Phenotypic characterization of BRCA1 and BRCA2 tumors based in a tissue microarray study with 37 immunohistochemical markers.
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- Breast Cancer Research & Treatment, 2005, v. 90, n. 1, p. 5, doi. 10.1007/s10549-004-1536-0
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- Article
Acceleration of short and long DNA read mapping without loss of accuracy using suffix array.
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- Bioinformatics, 2014, v. 30, n. 23, p. 3396
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- Publication type:
- Article