Works matching AU Domingo, Esteban

Results: 65

Inference with viral quasispecies diversity indices: clonal and NGS approaches.

Published in:

Bioinformatics, 2014, v. 30, n. 8, p. 1104, doi. 10.1093/bioinformatics/btt768

By:

Gregori, Josep;
Salicrú, Miquel;
Domingo, Esteban;
Sanchez, Alex;
Esteban, Juan I.;
Rodríguez-Frías, Francisco;
Quer, Josep

Publication type:

Article

Quasispecies and virus.

Published in:

European Biophysics Journal, 2018, v. 47, n. 4, p. 443, doi. 10.1007/s00249-018-1282-6

By:

Domingo, Esteban;
Perales, Celia

Publication type:

Article

Non-additive effects of multiple amino acid substitutions on antigen-antibody recognition.

Published in:

European Journal of Immunology, 1992, v. 22, n. 6, p. 1385, doi. 10.1002/eji.1830220609

By:

Mateu, Mauricio G.;
Andreu, David;
Carreno, Cristina;
Roig, Xavier;
Cairó, Jordi-Joan;
Camarero, Julio A.;
Giralt, Ernest;
Domingo, Esteban

Publication type:

Article

Molecular and Functional Bases of Selection against a Mutation Bias in an RNA Virus.

Published in:

Genome Biology & Evolution, 2017, v. 9, n. 5, p. 1212, doi. 10.1093/gbe/evx075

By:

de la Higuera, Ignacio;
Ferrer-Orta, Cristina;
de Ávila, Ana I.;
Perales, Celia;
Sierra, Macarena;
Singh, Kamalendra;
Sarafianos, Stefan G.;
Dehouck, Yves;
Bastolla, Ugo;
Verdaguer, Nuria;
Domingo, Esteban

Publication type:

Article

Mutation hot spots in hepatitis B surface antigen in chronic carriers from khoozestan province, southern of iran.

Published in:

2013

By:

Ramezani, Fatemeh;
Norouzi, Mehdi;
Sarizade, Gholam Reza;
Poortahmasebi, Vahdat;
Kalantar, Ebrahim;
Magnius, Lars;
Norder, Helen;
Domingo, Esteban;
Jazayeri, Seyed Mohammad

Publication type:

Journal Article

Mutation Hot Spots in Hepatitis B Surface Antigen in Chronic Carriers from Khoozestan Province, Southern of Iran.

Published in:

Iranian Journal of Allergy, Asthma & Immunology, 2013, v. 12, n. 3, p. 269

By:

Ramezani, Fatemeh;
Norouzi, Mehdi;
Sarizade, Gholam Reza;
Poortahmasebi, Vahdat;
Kalantar, Ebrahim;
Magnius, Lars;
Norder, Helen;
Domingo, Esteban;
Jazayeri, Seyed Mohammad

Publication type:

Article

Viral Quasispecies and Lethal Mutagenesis.

Published in:

European Review, 2016, v. 24, n. 1, p. 39, doi. 10.1017/S1062798715000411

By:

Domingo, Esteban;
Perales, Celia

Publication type:

Article

Rare haplotype load as marker for lethal mutagenesis.

Published in:

PLoS ONE, 2018, v. 13, n. 10, p. 1, doi. 10.1371/journal.pone.0204877

By:

Gregori, Josep;
Soria, María Eugenia;
Gallego, Isabel;
Guerrero-Murillo, Mercedes;
Esteban, Juan Ignacio;
Quer, Josep;
Perales, Celia;
Domingo, Esteban

Publication type:

Article

Influence of the Mutant Spectrum in Viral Evolution: Focused Selection of Antigenic Variants in a Reconstructed Viral Quasispecies.

Published in:

Molecular Biology & Evolution, 2008, v. 25, n. 8, p. 1544, doi. 10.1093/molbev/msn099

By:

Martín, Verónica;
Domingo, Esteban

Publication type:

Article

Evidence for Positive Selection in the Capsid Protein-Coding Region of the Foot-and-Mouth Disease Virus (FMDV) Subjected to Experimental Passage Regimens.

Published in:

Molecular Biology & Evolution, 2001, v. 18, n. 1, p. 10, doi. 10.1093/oxfordjournals.molbev.a003715

By:

Fares, Mario Ali;
Moya, Andrés;
Escarmís, Cristina;
Baranowski, Eric;
Domingo, Esteban;
Barrio, Eladio

Publication type:

Article

Adaptive value of foot-and-mouth disease virus capsid substitutions with opposite effects on particle acid stability.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-02757-3

By:

Caridi, Flavia;
Cañas-Arranz, Rodrigo;
Vázquez-Calvo, Ángela;
de León, Patricia;
Calderón, Katherine I.;
Domingo, Esteban;
Sobrino, Francisco;
Martín-Acebes, Miguel A.

Publication type:

Article

Prevalence and Genetic Heterogeneity of the Reverse Transcriptase T69S-S-X Insertion in Pretreated HIV-Infected Patients.

Published in:

Intervirology, 2001, v. 44, n. 6, p. 339, doi. 10.1159/000050068

By:

Briones, Carlos;
Mas, Antonio;
Pérez-Olmeda, Mayte;
Altisent, Carmen;
Domingo, Esteban;
Soriano, Vincent

Publication type:

Article

RNA virus fitness.

Published in:

Reviews in Medical Virology, 1997, v. 7, n. 2, p. 87, doi. 10.1002/(SICI)1099-1654(199707)7:2<87::AID-RMV188>3.0.CO;2-0

By:

Domingo, Esteban;
Menéndez-Arias, Luis;
Holland, John J.

Publication type:

Article

Biological and biomedical implications of the co-evolution of pathogens and their hosts.

Published in:

Nature Genetics, 2002, v. 32, n. 4, p. 569, doi. 10.1038/ng1202-569

By:

Woolhouse, Mark E. J.;
Webster, Joanne P.;
Domingo, Esteban;
Charlesworth, Brian;
Levin, Bruce R.

Publication type:

Article

Guanosine inhibits hepatitis C virus replication and increases indel frequencies, associated with altered intracellular nucleotide pools.

Published in:

PLoS Pathogens, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.ppat.1010210

By:

Sabariegos, Rosario;
Ortega-Prieto, Ana María;
Díaz-Martínez, Luis;
Grande-Pérez, Ana;
García Crespo, Carlos;
Gallego, Isabel;
de Ávila, Ana I.;
Albentosa-González, Laura;
Soria, María Eugenia;
Gastaminza, Pablo;
Domingo, Esteban;
Perales, Celia;
Mas, Antonio

Publication type:

Article

Viral quasispecies.

Published in:

PLoS Genetics, 2019, v. 15, n. 10, p. 1, doi. 10.1371/journal.pgen.1008271

By:

Domingo, Esteban;
Perales, Celia

Publication type:

Article

Adapting the rhizome concept to an extended definition of viral quasispecies and the implications for molecular evolution.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-68760-6

By:

Landa, Carlos Raico;
Ariza-Mateos, Ascensión;
Briones, Carlos;
Perales, Celia;
Wagner, Astrid;
Domingo, Esteban;
Gómez, Jordi

Publication type:

Article

SARS-CoV-2 mutant spectra as variant of concern nurseries: endless variation?

Published in:

Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2024.1358258

By:

Martínez-González, Brenda;
Eugenia Soria, María;
Mínguez, Pablo;
Lorenzo-Redondo, Ramón;
Salar-Vidal, Llanos;
López-García, Alberto;
Esteban-Muñoz, Mario;
Durán-Pastor, Antoni;
Somovilla, Pilar;
García-Crespo, Carlos;
de Ávila, Ana Isabel;
Gómez, Jordi;
Esteban, Jaime;
Fernández-Roblas, Ricardo;
Gadea, Ignacio;
Domingo, Esteban;
Perales, Celia

Publication type:

Article

The International Virus Bioinformatics Meeting 2022.

Published in:

Viruses (1999-4915), 2022, v. 14, n. 5, p. 973, doi. 10.3390/v14050973

By:

Hufsky, Franziska;
Beslic, Denis;
Boeckaerts, Dimitri;
Duchene, Sebastian;
González-Tortuero, Enrique;
Gruber, Andreas J.;
Guo, Jiarong;
Jansen, Daan;
Juma, John;
Kongkitimanon, Kunaphas;
Luque, Antoni;
Ritsch, Muriel;
Lencioni Lovate, Gabriel;
Nishimura, Luca;
Pas, Célia;
Domingo, Esteban;
Hodcroft, Emma;
Lemey, Philippe;
Sullivan, Matthew B.;
Weber, Friedemann

Publication type:

Article

Mutation Rates, Mutation Frequencies, and Proofreading-Repair Activities in RNA Virus Genetics.

Published in:

Viruses (1999-4915), 2021, v. 13, n. 9, p. 1882, doi. 10.3390/v13091882

By:

Domingo, Esteban;
García-Crespo, Carlos;
Lobo-Vega, Rebeca;
Perales, Celia

Publication type:

Article

Population Disequilibrium as Promoter of Adaptive Explorations in Hepatitis C Virus.

Published in:

Viruses (1999-4915), 2021, v. 13, n. 4, p. 616, doi. 10.3390/v13040616

By:

García-Crespo, Carlos;
Gallego, Isabel;
Soria, María Eugenia;
de Ávila, Ana Isabel;
Martínez-González, Brenda;
Vázquez-Sirvent, Lucía;
Lobo-Vega, Rebeca;
Moreno, Elena;
Gómez, Jordi;
Briones, Carlos;
Gregori, Josep;
Quer, Josep;
Domingo, Esteban;
Perales, Celia;
Martínez, Miguel A.

Publication type:

Article

Resistance of Hepatitis C Virus to Inhibitors: Complexity and Clinical Implications.

Published in:

Viruses (1999-4915), 2015, v. 7, n. 11, p. 5746, doi. 10.3390/v7112902

By:

Perales, Celia;
Quer, Josep;
Gregori, Josep;
Esteban, Juan Ignacio;
Domingo, Esteban

Publication type:

Article

Arenaviruses and Lethal Mutagenesis. Prospects for New Ribavirin-based Interventions.

Published in:

Viruses (1999-4915), 2012, v. 4, n. 11, p. 2786, doi. 10.3390/v4112786

By:

Moreno, Héctor;
Grande-Pérez, Ana;
Domingo, Esteban;
Martín, Verónica

Publication type:

Article

Paradoxical Interplay of Viral and Cellular Functions.

Published in:

Viruses (1999-4915), 2011, v. 3, n. 3, p. 272, doi. 10.3390/v3030272

By:

Domingo, Esteban

Publication type:

Article

Baseline hepatitis C virus resistance-associated substitutions present at frequencies lower than 15% may be clinically significant.

Published in:

Infection & Drug Resistance, 2018, v. 11, p. 2207, doi. 10.2147/IDR.S172226

By:

Perales, Celia;
Chen, Qian;
Soria, Maria Eugenia;
Gregori, Josep;
Garcia-Cehic, Damir;
Nieto-Aponte, Leonardo;
Castells, Lluis;
Imaz, Arkaitz;
Llorens-Revull, Meritxell;
Domingo, Esteban;
Buti, Maria;
Esteban, Juan Ignacio;
Rodriguez-Frias, Francisco;
Quer, Josep

Publication type:

Article

Viruses as archaeological tools for uncovering ancient molecular relationships.

Published in:

Annals of the New York Academy of Sciences, 2023, v. 1529, n. 1, p. 3, doi. 10.1111/nyas.15071

By:

Ariza‐Mateos, Ascensión;
Briones, Carlos;
Perales, Celia;
Bayo‐Jiménez, María Teresa;
Domingo, Esteban;
Gómez, Jordi

Publication type:

Article

The 30th anniversary of quasispecies. Meeting on ‘Quasispecies: past, present and future’.

Published in:

EMBO Reports, 2009, v. 10, n. 5, p. 444, doi. 10.1038/embor.2009.61

By:

Domingo, Esteban;
Wain-Hobson, Simon

Publication type:

Article

Foot-and-mouth disease in Europe.

Published in:

EMBO Reports, 2001, v. 2, n. 6, p. 459, doi. 10.1093/embo-reports/kve122

By:

Sobrino, Francisco;
Domingo, Esteban

Publication type:

Article

An Efficient Microarray-Based Genotyping Platform for the Identification of Drug-Resistance Mutations in Majority and Minority Subpopulations of HIV-1 Quasispecies.

Published in:

PLoS ONE, 2016, v. 11, n. 12, p. 1, doi. 10.1371/journal.pone.0166902

By:

Martín, Verónica;
Perales, Celia;
Fernández-Algar, María;
Dos Santos, Helena G.;
Garrido, Patricia;
Pernas, María;
Parro, Víctor;
Moreno, Miguel;
García-Pérez, Javier;
Alcamí, José;
Torán, José Luis;
Abia, David;
Domingo, Esteban;
Briones, Carlos

Publication type:

Article

Lethal Mutagenesis of Hepatitis C Virus Induced by Favipiravir.

Published in:

PLoS ONE, 2016, v. 11, n. 10, p. 1, doi. 10.1371/journal.pone.0164691

By:

de Ávila, Ana I.;
Gallego, Isabel;
Soria, Maria Eugenia;
Gregori, Josep;
Quer, Josep;
Esteban, Juan Ignacio;
Rice, Charles M.;
Domingo, Esteban;
Perales, Celia

Publication type:

Article

Crystallization and preliminary x-ray diffraction studies of a monoclonal antibody fab fragment against foot-and-mouth disease virus and of its complex with the main antigenic site peptide.

Published in:

Proteins, 1994, v. 18, n. 2, p. 201, doi. 10.1002/prot.340180212

By:

Verdaguer, Nuria;
Mateu, Mauricio G.;
Bravo, Jerónimo;
Tormo, José;
Giralt, Ernest;
Andreu, David;
Domingo, Esteban;
Fita, Ignacio

Publication type:

Article

The structure of a protein primer–polymerase complex in the initiation of genome replication.

Published in:

EMBO Journal, 2006, v. 25, n. 4, p. 880, doi. 10.1038/sj.emboj.7600971

By:

Ferrer-Orta, Cristina;
Arias, Armando;
Agudo, Rubén;
Pérez-Luque, Rosa;
Escarmís, Cristina;
Domingo, Esteban;
Verdaguer, Nuria

Publication type:

Article

Role of a dipeptide insertion between codons 69 and 70 of HIV-1 reverse transcriptase in the mechanism of AZT resistance.

Published in:

EMBO Journal, 2000, v. 19, n. 21, p. 5752, doi. 10.1093/emboj/19.21.5752

By:

Mas, Antonio;
Parera, Mariona;
Briones, Carlos;
Soriano, Vicente;
Martínez, Miguel Angel;
Domingo, Esteban;
Menéndez-Arias, Luis

Publication type:

Article

Comparison of Extracellular Vesicle Isolation Methods for miRNA Sequencing.

Published in:

International Journal of Molecular Sciences, 2023, v. 24, n. 15, p. 12183, doi. 10.3390/ijms241512183

By:

Llorens-Revull, Meritxell;
Martínez-González, Brenda;
Quer, Josep;
Esteban, Juan Ignacio;
Núñez-Moreno, Gonzalo;
Mínguez, Pablo;
Burgui, Idoia;
Ramos-Ruíz, Ricardo;
Soria, María Eugenia;
Rico, Angie;
Riveiro-Barciela, Mar;
Sauleda, Silvia;
Piron, María;
Corrales, Irene;
Borràs, Francesc E.;
Rodríguez-Frías, Francisco;
Rando, Ariadna;
Ramírez-Serra, Clara;
Camós, Silvia;
Domingo, Esteban

Publication type:

Article

Quasispecies Fitness Partition to Characterize the Molecular Status of a Viral Population. Negative Effect of Early Ribavirin Discontinuation in a Chronically Infected HEV Patient.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 23, p. 14654, doi. 10.3390/ijms232314654

By:

Gregori, Josep;
Colomer-Castell, Sergi;
Campos, Carolina;
Ibañez-Lligoña, Marta;
Garcia-Cehic, Damir;
Rando-Segura, Ariadna;
Adombie, Caroline Melanie;
Pintó, Rosa;
Guix, Susanna;
Bosch, Albert;
Domingo, Esteban;
Gallego, Isabel;
Perales, Celia;
Cortese, Maria Francesca;
Tabernero, David;
Buti, Maria;
Riveiro-Barciela, Mar;
Esteban, Juan Ignacio;
Rodriguez-Frias, Francisco;
Quer, Josep

Publication type:

Article

Pipeline for specific subtype amplification and drug resistance detection in hepatitis C virus.

Published in:

2018

By:

Soria, María Eugenia;
Gregori, Josep;
Chen, Qian;
García-Cehic, Damir;
Llorens, Meritxell;
de Ávila, Ana I.;
Beach, Nathan M.;
Domingo, Esteban;
Rodríguez-Frías, Francisco;
Buti, María;
Esteban, Rafael;
Esteban, Juan Ignacio;
Quer, Josep;
Perales, Celia;
Soria, María Eugenia;
García-Cehic, Damir;
de Ávila, Ana I;
Rodríguez-Frías, Francisco;
Buti, María

Publication type:

journal article

Dissimilar Conservation Pattern in Hepatitis C Virus Mutant Spectra, Consensus Sequences, and Data Banks.

Published in:

Journal of Clinical Medicine, 2020, v. 9, n. 11, p. 3450, doi. 10.3390/jcm9113450

By:

García-Crespo, Carlos;
Soria, María Eugenia;
Gallego, Isabel;
Ávila, Ana Isabel de;
Martínez-González, Brenda;
Vázquez-Sirvent, Lucía;
Gómez, Jordi;
Briones, Carlos;
Gregori, Josep;
Quer, Josep;
Perales, Celia;
Domingo, Esteban

Publication type:

Article

Topology of evolving, mutagenized viral populations: quasispecies expansion, compression, and operation of negative selection.

Published in:

BMC Evolutionary Biology, 2008, v. 8, p. 1, doi. 10.1186/1471-2148-8-207

By:

Ojosnegros, Samuel;
Agudo, Rubén;
Sierra, Macarena;
Briones, Carlos;
Sierra, Saleta;
González- López, Claudia;
Domingo, Esteban;
Cristina, Juan

Publication type:

Article

Similar HIV‐1 evolution and immunological responses at 10 years despite several therapeutic strategies and host HLA Types.

Published in:

Journal of Medical Virology, 2004, v. 73, n. 4, p. 495

By:

Mireia Arnedo‐Valero;
Montserrat Plana;
Antonio Mas;
Meritxell Guilà;
Cristina Gil;
Pedro Castro;
Felipe Garcia;
Esteban Domingo;
Josep Ma Gatell;
Tomàs Pumarola

Publication type:

Article

Long-term suppression of plasma viremia with highly active antiretroviral therapy despite virus evolution and very limited selection of drug-resistant genotypes (María Pernas, Rafael de la Rosa, and Gema Gómez-Mariano contributed equally to the present study.)

Published in:

Journal of Medical Virology, 2004, v. 73, n. 3, p. 350

By:

Nonia Pariente;
María Pernas;
Rafael de la Rosa;
Gema Gómez-Mariano;
Guerau Fernández;
Amalia Rubio;
Mariola López;
José Miguel Benito;
Cecilio López-Galíndez;
Manuel Leal;
Esteban Domingo;
Miguel Angel Martinez;
Antonio Mas

Publication type:

Article

Transdisciplinary EU science institute needs funds urgently.

Published in:

2010

By:

Vasbinder, Jan W.;
Andersson, Bertil;
Arthur, W. Brian;
Boasson, Maarten;
de Boer, Rob;
Changeux, Jean Pierre;
Domingo, Esteban;
Eigen, Manfred;
Fersht, Alan;
Frenkel, Daan;
Rees, Martin;
Groen, Theo;
Huber, Robert;
Hunt, Tim;
Holland, John;
May, Robert;
Norrby, Erling;
Nijkamp, Peter;
Lehn, Jean Marie;
Rabbinge, Rudy

Publication type:

Letter

Native-like cyclic peptide models of a viral antigenic site: finding a balance between rigidity and flexibility.

Published in:

Journal of Molecular Recognition, 2000, v. 13, n. 1, p. 5, doi. 10.1002/(SICI)1099-1352(200001/02)13:1<5::AID-JMR480>3.0.CO;2-L

By:

Valero, Mari-Luz;
Camarero, Julio A.;
Haack, Thomas;
Mateu, Mauricio G.;
Domingo, Esteban;
Giralt, Ernest;
Andreu, David

Publication type:

Article

Competition-colonization dynamics.

Published in:

Communicative & Integrative Biology, 2010, v. 3, n. 4, p. 333, doi. 10.4161/cib.3.4.11658

By:

Ojosnegros, Samuel;
Beerenwinkel, Niko;
Domingo, Esteban

Publication type:

Article

Natural languages and RNA virus evolution.

Published in:

Journal of Physiology, 2024, v. 602, n. 11, p. 2565, doi. 10.1113/JP284415

By:

Ariza‐Mateos, Ascensión;
Briones, Carlos;
Perales, Celia;
Sobrino, Francisco;
Domingo, Esteban;
Gómez, Jordi

Publication type:

Article

Archaeological approaches to RNA virus evolution.

Published in:

Journal of Physiology, 2024, v. 602, n. 11, p. 2469, doi. 10.1113/JP284416

By:

Ariza‐Mateos, Ascensión;
Briones, Carlos;
Perales, Celia;
Sobrino, Francisco;
Domingo, Esteban;
Gómez, Jordi

Publication type:

Article

Akt Phosphorylation of Hepatitis C Virus NS5B Regulates Polymerase Activity and Hepatitis C Virus Infection.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.754664

By:

Sabariegos, Rosario;
Albentosa-González, Laura;
Palmero, Blanca;
Clemente-Casares, Pilar;
Ramírez, Eugenio;
García-Crespo, Carlos;
Gallego, Isabel;
de Ávila, Ana Isabel;
Perales, Celia;
Domingo, Esteban;
Mas, Antonio

Publication type:

Article

Quasispecies structure and persistence of RNA viruses.

Published in:

Emerging Infectious Diseases, 1998, v. 4, n. 4, p. 521, doi. 10.3201/eid0404.980402

By:

Domingo, Esteban;
Baranowski, Eric;
Ruiz-Jarabo, Carmen M.;
Escarmis, Cristina;
Martin-Hernandez, Ana M.;
Saiz, Juan C.

Publication type:

Article

Mispair Extension Fidelity of Human Immunodeficiency Virus Type 1 Reverse Transcriptases with Amino Acid Substitutions Affecting Tyr115.

Published in:

Nucleic Acids Research, 1997, v. 25, n. 7, p. 1383, doi. 10.1093/nar/25.7.1383

By:

Martín-Hernández, Ana M.;
Gutiérrez-Rivas, Mónica;
Domingo, Esteban;
Menendez-Arias, Luis

Publication type:

Article

Potential Benefits of Sequential Inhibitor-Mutagen Treatments of RNA Virus Infections.

Published in:

PLoS Pathogens, 2009, v. 5, n. 11, p. 1, doi. 10.1371/journal.ppat.1000658

By:

Perales, Celia;
Agudo, Rubén;
Tejero, Hector;
Manrubia, Susanna C.;
Domingo, Esteban

Publication type:

Article

Molecular Basis for a Lack of Correlation between Viral Fitness and Cell Killing Capacity.

Published in:

PLoS Pathogens, 2007, v. 3, n. 4, p. e53, doi. 10.1371/journal.ppat.0030053

By:

Herrera, Mónica;
García-Arriaza, Juan;
Pariente, Nonia;
Escarmís, Cristina;
Domingo, Esteban

Publication type:

Article