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Modern Solutions for Ancient Pathogens: Direct Pathogen Sequencing for Diagnosis of Lepromatous Leprosy and Cerebral Coenurosis.
Published in:
Open Forum Infectious Diseases, 2022, v. 9, n. 9, p. 1, doi. 10.1093/ofid/ofac428
By:
- Young, Bernadette C;
- Bush, Stephen J;
- Lipworth, Sam;
- George, Sophie;
- Dingle, Kate E;
- Sanderson, Nick;
- Brankin, Alice;
- Walker, Timothy;
- Sharma, Srilakshmi;
- Leong, James;
- Plaha, Puneet;
- Hofer, Monika;
- Chiodini, Peter;
- Gottstein, B;
- Furrer, Lavinia;
- Crook, Derrick;
- Brent, Andrew
Publication type:
Article
Wild bird-associated C ampylobacter jejuni isolates are a consistent source of human disease, in Oxfordshire, United Kingdom.
Published in:
Environmental Microbiology Reports, 2015, v. 7, n. 5, p. 782, doi. 10.1111/1758-2229.12314
By:
- Cody, Alison J.;
- McCarthy, Noel D.;
- Bray, James E.;
- Wimalarathna, Helen M. L.;
- Colles, Frances M.;
- Jansen van Rensburg, Melissa J.;
- Dingle, Kate E.;
- Waldenström, Jonas;
- Maiden, Martin C. J.
Publication type:
Article
Extended Sequence Typing of Campylobacter spp., United Kingdom.
Published in:
Emerging Infectious Diseases, 2008, v. 14, n. 10, p. 1620, doi. 10.3201/eid1410.071109
By:
- Dingle, Kate E.;
- McCarthy, Noel D.;
- Cody, Alison J.;
- Peto, Tim E. A.;
- Maiden, Martin C. J.
Publication type:
Article
Host-associated genetic import in Campylobacter jejuni.
Published in:
2007
By:
- McCarthy, Noel D.;
- Colles, Frances M.;
- Dingle, Kate E.;
- Bagnall, Mary C.;
- Manning, Georgina;
- Maiden, Martin C. J.;
- Falush, Daniel
Publication type:
journal article
Molecular characterization of Campylobacter jejuni clones: a basis for epidemiologic investigation.
Published in:
2002
By:
- Dingle, Kate E.;
- Colles, Frances M.;
- Ure, Roisin;
- Wagenaae, Jaap A.;
- Duim, Birgitta;
- Bolton, Frederick J.;
- Fox, Andrew J.;
- Wareing, David R.A.;
- Maiden, Martin C.J.;
- Wagenaar, Jaap A
Publication type:
journal article
A Modified RNA-Seq Approach for Whole Genome Sequencing of RNA Viruses from Faecal and Blood Samples.
Published in:
PLoS ONE, 2013, v. 8, n. 6, p. 1, doi. 10.1371/journal.pone.0066129
By:
- Batty, Elizabeth M.;
- Wong, T. H. Nicholas;
- Trebes, Amy;
- Argoud, Karène;
- Attar, Moustafa;
- Buck, David;
- Ip, Camilla L. C.;
- Golubchik, Tanya;
- Cule, Madeleine;
- Bowden, Rory;
- Manganis, Charis;
- Klenerman, Paul;
- Barnes, Eleanor;
- Walker, A. Sarah;
- Wyllie, David H.;
- Wilson, Daniel J.;
- Dingle, Kate E.;
- Peto, Tim E. A.;
- Crook, Derrick W.;
- Piazza, Paolo
Publication type:
Article
Macro and Micro Diversity of Clostridium difficile Isolates from Diverse Sources and Geographical Locations.
Published in:
PLoS ONE, 2012, v. 7, n. 3, p. 1, doi. 10.1371/journal.pone.0031559
By:
- Stabler, Richard A.;
- Dawson, Lisa F.;
- Valiente, Esmeralda;
- Cairns, Michelle D.;
- Martin, Melissa J.;
- Donahue, Elizabeth H.;
- Riley, Thomas V.;
- Glenn Songer, J.;
- Kuijper, J.;
- Dingle, Kate E.;
- Wren, Brendan W.
Publication type:
Article
Clinical Clostridium difficile: Clonality and Pathogenicity Locus Diversity.
Published in:
PLoS ONE, 2011, v. 6, n. 5, p. 1, doi. 10.1371/journal.pone.0019993
By:
- Dingle, Kate E.;
- Griffiths, David;
- Didelot, Xavier;
- Evans, Jessica;
- Vaughan, Alison;
- Kachrimanidou, Melina;
- Stoesser, Nicole;
- Jolley, Keith A.;
- Golubchik, Tanya;
- Harding, Rosalind M.;
- Peto, Tim E.;
- Fawley, Warren;
- Walker, A. Sarah;
- Wilcox, Mark;
- Crook, Derrick W.
Publication type:
Article
Recombinational Switching of the Clostridium difficile S-Layer and a Novel Glycosylation Gene Cluster Revealed by Large-Scale Whole-Genome Sequencing.
Published in:
Journal of Infectious Diseases, 2013, v. 207, n. 4, p. 675, doi. 10.1093/infdis/jis734
By:
- Dingle, Kate E.;
- Didelot, Xavier;
- Ansari, M. Azim;
- Eyre, David W.;
- Vaughan, Alison;
- Griffiths, David;
- Ip, Camilla L. C.;
- Batty, Elizabeth M.;
- Golubchik, Tanya;
- Bowden, Rory;
- Jolley, Keith A.;
- Hood, Derek W.;
- Fawley, Warren N.;
- Walker, A. Sarah;
- Peto, Timothy E.;
- Wilcox, Mark H.;
- Crook, Derrick W.
Publication type:
Article
Major genetic discontinuity and novel toxigenic species in Clostridioides difficile taxonomy.
Published in:
eLife, 2021, p. 1, doi. 10.7554/eLife.64325
By:
- Knight, Daniel R.;
- Imwattana, Korakrit;
- Kullin, Brian;
- Guerrero-Araya, Enzo;
- Paredes-Sabja, Daniel;
- Didelot, Xavier;
- Dingle, Kate E.;
- Eyre, David W.;
- Rodrıguez, Cesar
Publication type:
Article
Correlation of patient immune responses with genetically characterized small round-structured viruses involved in outbreaks of nonbacterial acute gastroenteritis in the United States, 1990 to 1995.
Published in:
Journal of Medical Virology, 1997, v. 53, n. 4, p. 372, doi. 10.1002/(SICI)1096-9071(199712)53:4<372::AID-JMV10>3.0.CO;2-H
By:
- Noel, Jacqueline S.;
- Ando, Tamie;
- Leite, Jose Paulo;
- Green, Kim Y.;
- Dingle, Kate E.;
- Estes, Mary K.;
- Seto, Yoshiyuki;
- Monroe, Stephan S.;
- Glass, Roger I.
Publication type:
Article
Campylobacter infection of broiler chickens in a free-range environment.
Published in:
Environmental Microbiology, 2008, v. 10, n. 8, p. 2042, doi. 10.1111/j.1462-2920.2008.01623.x
By:
- Colles, Frances M.;
- Jones, Tracey A.;
- McCarthy, Noel D.;
- Sheppard, Samuel K.;
- Cody, Alison J.;
- Dingle, Kate E.;
- Dawkins, Marian S.;
- Maiden, Martin C. J.
Publication type:
Article
Microevolutionary analysis of Clostridium difficile genomes to investigate transmission.
Published in:
Genome Biology, 2012, v. 13, n. 12, p. 1, doi. 10.1186/gb-2012-13-12-r118
By:
- Didelot, Xavier;
- Eyre, David W.;
- Cule, Madeleine;
- Ip, Camilla L.C.;
- Ansari, M. Azim;
- Griffiths, David;
- Vaughan, Alison;
- O'Connor, Lily;
- Golubchik, Tanya;
- Batty, Elizabeth M.;
- Piazza, Paolo;
- Wilson, Daniel J.;
- Bowden, Rory;
- Donnelly, Peter J.;
- Dingle, Kate E.;
- Wilcox, Mark;
- Walker, A. Sarah;
- Crook, Derrick W.;
- Peto, Tim E. A.;
- Harding, Rosalind M.
Publication type:
Article
The Complexity and Diversity of the Pathogenicity Locus in Clostridium difficile Clade 5.
Published in:
Genome Biology & Evolution, 2014, v. 6, n. 12, p. 3159, doi. 10.1093/gbe/evu248
By:
- Elliott, Briony;
- Dingle, Kate E.;
- Didelot, Xavier;
- Crook, Derrick W.;
- Riley, Thomas V.
Publication type:
Article
Evolutionary History of the Clostridium difficile Pathogenicity Locus.
Published in:
Genome Biology & Evolution, 2014, v. 6, n. 1, p. 36, doi. 10.1093/gbe/evt204
By:
- Dingle, Kate E.;
- Elliott, Briony;
- Robinson, Esther;
- Griffiths, David;
- Eyre, David W.;
- Stoesser, Nicole;
- Vaughan, Alison;
- Golubchik, Tanya;
- Fawley, Warren N.;
- Wilcox, Mark H.;
- Peto, Timothy E.;
- Walker, A. Sarah;
- Riley, Thomas V.;
- Crook, Derrick W.;
- Didelot, Xavier
Publication type:
Article
Two Distinct Patterns of Clostridium difficile Diversity Across Europe Indicating Contrasting Routes of Spread.
Published in:
Clinical Infectious Diseases, 2018, v. 67, n. 7, p. 1035, doi. 10.1093/cid/ciy252
By:
- Eyre, David W;
- Davies, Kerrie A;
- Davis, Georgina;
- Fawley, Warren N;
- Dingle, Kate E;
- Maio, Nicola De;
- Karas, Andreas;
- Crook, Derrick W;
- Peto, Tim E A;
- Walker, A Sarah
Publication type:
Article
Detection of a cfr(B) Variant in German Enterococcus faecium Clinical Isolates and the Impact on Linezolid Resistance in Enterococcus spp.
Published in:
PLoS ONE, 2016, v. 11, n. 11, p. 1, doi. 10.1371/journal.pone.0167042
By:
- Bender, Jennifer K.;
- Fleige, Carola;
- Klare, Ingo;
- Fiedler, Stefan;
- Mischnik, Alexander;
- Mutters, Nico T.;
- Dingle, Kate E.;
- Werner, Guido
Publication type:
Article
Whole genome sequencing and de novo assembly identifies Sydney-like variant noroviruses and recombinants during the winter 2012/2013 outbreak in England.
Published in:
Virology Journal, 2013, v. 10, n. 1, p. 1, doi. 10.1186/1743-422X-10-335
By:
- Wong, T. H. Nicholas;
- Dearlove, Bethany L.;
- Hedge, Jessica;
- Giess, Adam P.;
- Piazza, Paolo;
- Trebes, Amy;
- Paul, John;
- Smit, Erasmus;
- Smith, E. Grace;
- Sutton, Julian K.;
- Wilcox, Mark H.;
- Dingle, Kate E.;
- Peto, Tim E. A.;
- Crook, Derrick W.;
- Wilson, Daniel J.;
- Wyllie, David H.
Publication type:
Article
Characterisation of Clostridium difficile hospital ward-based transmission using extensive epidemiological data and molecular typing.
Published in:
2012
By:
- Walker AS;
- Eyre DW;
- Wyllie DH;
- Dingle KE;
- Harding RM;
- O'Connor L;
- Griffiths D;
- Vaughan A;
- Finney J;
- Wilcox MH;
- Crook DW;
- Peto TE;
- Walker, A Sarah;
- Eyre, David W;
- Wyllie, David H;
- Dingle, Kate E;
- Harding, Rosalind M;
- O'Connor, Lily;
- Griffiths, David;
- Vaughan, Ali
Publication type:
journal article
Characterisation of Clostridium difficile Hospital Ward- Based Transmission Using Extensive Epidemiological Data and Molecular Typing.
Published in:
PLoS Medicine, 2012, v. 9, n. 2, p. 1, doi. 10.1371/journal.pmed.1001172
By:
- Walker, A. Sarah;
- Eyre, David W.;
- Wyllie, David H.;
- Dingle, Kate E.;
- Harding, Rosalind M.;
- O'Connor, Lily;
- Griffiths, David;
- Vaughan, Ali;
- Finney, John;
- Wilcox, Mark H.;
- Crook, Derrick W.;
- Peto, Tim E. A.
Publication type:
Article
Epidemiology of Clostridium difficile in infants in Oxfordshire, UK: Risk factors for colonization and carriage, and genetic overlap with regional C. difficile infection strains.
Published in:
PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0182307
By:
- Stoesser, Nicole;
- Eyre, David W.;
- Quan, T. Phuong;
- Godwin, Heather;
- Pill, Gemma;
- Mbuvi, Emily;
- Vaughan, Alison;
- Griffiths, David;
- Martin, Jessica;
- Fawley, Warren;
- Dingle, Kate E.;
- Oakley, Sarah;
- Wanelik, Kazimierz;
- Finney, John M.;
- Kachrimanidou, Melina;
- Moore, Catrin E.;
- Gorbach, Sherwood;
- Riley, Thomas V.;
- Crook, Derrick W.;
- Peto, Tim E. A.
Publication type:
Article
Relationship Between Bacterial Strain Type, Host Biomarkers, and Mortality in Clostridium difficile Infection.
Published in:
Clinical Infectious Diseases, 2013, v. 56, n. 11, p. 1589
By:
- Walker, A. Sarah;
- Eyre, David W.;
- Wyllie, David H.;
- Dingle, Kate E.;
- Griffiths, David;
- Shine, Brian;
- Oakley, Sarah;
- O'Connor, Lily;
- Finney, John;
- Vaughan, Alison;
- Crook, Derrick W.;
- Wilcox, Mark H.;
- Peto, Tim E. A.
Publication type:
Article
Predictors of First Recurrence of Clostridium difficile Infection: Implications for Initial Management.
Published in:
Clinical Infectious Diseases, 2012, v. 55, n. suppl_2, p. S77
By:
- Eyre, David W.;
- Walker, A. Sarah;
- Wyllie, David;
- Dingle, Kate E.;
- Griffiths, David;
- Finney, John;
- O'Connor, Lily;
- Vaughan, Alison;
- Crook, Derrick W.;
- Wilcox, Mark H.;
- Peto, Timothy E. A.
Publication type:
Article

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