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Molecular characterization of colorectal cancer related peritoneal metastatic disease.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-32198-z
By:
- Lenos, Kristiaan J.;
- Bach, Sander;
- Ferreira Moreno, Leandro;
- ten Hoorn, Sanne;
- Sluiter, Nina R.;
- Bootsma, Sanne;
- Vieira Braga, Felipe A.;
- Nijman, Lisanne E.;
- van den Bosch, Tom;
- Miedema, Daniel M.;
- van Dijk, Erik;
- Ylstra, Bauke;
- Kulicke, Ruth;
- Davis, Fred P.;
- Stransky, Nicolas;
- Smolen, Gromoslaw A.;
- Coebergh van den Braak, Robert R. J.;
- IJzermans, Jan N. M.;
- Martens, John W. M.;
- Hallam, Sally
Publication type:
Article
Chromosomal copy number heterogeneity predicts survival rates across cancers.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-23384-6
By:
- van Dijk, Erik;
- van den Bosch, Tom;
- Lenos, Kristiaan J.;
- El Makrini, Khalid;
- Nijman, Lisanne E.;
- van Essen, Hendrik F. B.;
- Lansu, Nico;
- Boekhout, Michiel;
- Hageman, Joris H.;
- Fitzgerald, Rebecca C.;
- Punt, Cornelis J. A.;
- Tuynman, Jurriaan B.;
- Snippert, Hugo J. G.;
- Kops, Geert J. P. L.;
- Medema, Jan Paul;
- Ylstra, Bauke;
- Vermeulen, Louis;
- Miedema, Daniël M.
Publication type:
Article
A phase Ib/II study of regorafenib and paclitaxel in patients with beyond first-line advanced esophagogastric carcinoma (REPEAT).
Published in:
Therapeutic Advances in Medical Oncology, 2022, p. 1, doi. 10.1177/17588359221109196
By:
- Stroes, Charlotte I;
- Schokker, Sandor;
- Khurshed, Mohammed;
- van der Woude, Stephanie O;
- Mathôt, Ron AA;
- Slingerland, Marije;
- de Vos-Geelen, Judith;
- Zucchetti, Massimo;
- Matteo, Cristina;
- van Dijk, Erik;
- Ylstra, Bauke;
- Thijssen, Victor;
- Derks, Sarah;
- Godefa, Tesfay;
- Dijksterhuis, Willemieke;
- Breimer, Gerben E;
- van Delden, Otto M;
- Verhoeven, Rob HA;
- Meijer, Sybren L;
- Bijlsma, Maarten F
Publication type:
Article
Nanoscale Organization of the Pathogen Receptor DC-SIGN Mapped by Single-Molecule High-Resolution Fluorescence Microscopy.
Published in:
ChemPhysChem, 2007, v. 8, n. 10, p. 1473, doi. 10.1002/cphc.200700169
By:
- de Bakker, Bärbel I.;
- de Lange, Frank;
- Cambi, Alessandra;
- Korterik, Jeroen P.;
- van Dijk, Erik M. H. P.;
- van Hulst, Niek F.;
- Figdor, Carl G.;
- Garcia-Parajo, Maria F.
Publication type:
Article
Cover Picture: Nanoscale Organization of the Pathogen Receptor DC-SIGN Mapped by Single-Molecule High-Resolution Fluorescence Microscopy (ChemPhysChem 10/2007).
Published in:
ChemPhysChem, 2007, v. 8, n. 10, p. 1425, doi. 10.1002/cphc.200790029
By:
- de Bakker, Bärbel I.;
- de Lange, Frank;
- Cambi, Alessandra;
- Korterik, Jeroen P.;
- van Dijk, Erik M. H. P.;
- van Hulst, Niek F.;
- Figdor, Carl G.;
- Garcia-Parajo, Maria F.
Publication type:
Article
Power-Law Blinking in the Fluorescence of Single Organic Molecules.
Published in:
ChemPhysChem, 2007, v. 8, n. 6, p. 823, doi. 10.1002/cphc.200600783
By:
- Hoogenboom, Jacob P.;
- Hernando, Jordi;
- van Dijk, Erik M. H. P.;
- van Hulst, Niek F.;
- García-Parajó, Maria F.
Publication type:
Article
Energy Transfer in Single-Molecule Photonic Wires.
Published in:
ChemPhysChem, 2005, v. 6, n. 5, p. 819
By:
- Mara F. Garca-Paraj;
- Jordi Hernando;
- Gabriel Sanchez Mosteiro;
- Jacob P. Hoogenboom;
- Erik M. H. P. van Dijk;
- Niek. F. van Hulst
Publication type:
Article
Photon Antibunching Proves Emission from a Single Subunit in the Autofluorescent Protein DsRed.
Published in:
ChemPhysChem, 2004, v. 5, n. 11, p. 1782, doi. 10.1002/cphc.200400216
By:
- Gabriel Snchez-Mosteiro;
- Majolein Koopman;
- Erik M. H. P. van Dijk;
- Jordi Hernando;
- Niek F. van Hulst;
- Mara F. Garca-Paraj
Publication type:
Article
Microdomains of the C-type lectin DC-SIGN are portals for virus entry into dendritic cells.
Published in:
Journal of Cell Biology, 2004, v. 164, n. 1, p. 145, doi. 10.1083/jcb.200306112
By:
- Cambi, Alessandra;
- de Lange, Frank;
- van Maarseveen, Noortje M.;
- Nijhuis, Monique;
- Joosten, Ben;
- van Dijk, Erik M. H. P.;
- de Bakker, Bärbel I.;
- Fransen, Jack A. M.;
- Bovee-Geurts, Petra H. M.;
- van Leeuwen, Frank N.;
- van Hulst, Niek F.;
- Figdor, Carl C.
Publication type:
Article
Ongoing Transmission of Hepatitis B Virus in Rural Parts of the Netherlands, 2009–2013.
Published in:
PLoS ONE, 2015, v. 10, n. 2, p. 1, doi. 10.1371/journal.pone.0117703
By:
- Soetens, Loes C.;
- van Benthem, Birgit H. B.;
- Urbanus, Anouk;
- Cremer, Jeroen;
- Benschop, Kimberly S. M.;
- Rietveld, Ariene;
- van Dijk, Erik I.;
- Hahné, Susan J. M.
Publication type:
Article
Predictive value of chromosome 18q11.2‐q12.1 loss for benefit from bevacizumab in metastatic colorectal cancer: A post hoc analysis of the randomized phase III‐trial AGITG‐MAX.
Published in:
International Journal of Cancer, 2022, v. 151, n. 7, p. 1166, doi. 10.1002/ijc.34061
By:
- van Dijk, Erik;
- van Werkhoven, Erik;
- Asher, Rebecca;
- Mooi, Jennifer K.;
- Espinoza, David;
- van Essen, Hendrik F.;
- van Tinteren, Harm;
- van Grieken, Nicole C. T.;
- Punt, Cornelis J. A.;
- Tebbutt, Niall C.;
- Ylstra, Bauke
Publication type:
Article
The Hydrophobic Temperature Dependence of Amino Acids Directly Calculated from Protein Structures.
Published in:
PLoS Computational Biology, 2015, v. 11, n. 5, p. 1, doi. 10.1371/journal.pcbi.1004277
By:
- van Dijk, Erik;
- Hoogeveen, Arlo;
- Abeln, Sanne
Publication type:
Article
Long-term Survival Update and Extended RAS Mutational Analysis of the CAIRO2 Trial: Addition of Cetuximab to CAPOX/Bevacizumab in Metastatic Colorectal Cancer.
Published in:
Clinical Colorectal Cancer, 2023, v. 22, n. 1, p. 67, doi. 10.1016/j.clcc.2022.11.006
By:
- ten Hoorn, Sanne;
- Mol, Linda;
- Sommeijer, Dirkje W.;
- Nijman, Lisanne;
- van den Bosch, Tom;
- de Back, Tim R.;
- Ylstra, Bauke;
- van Dijk, Erik;
- van Noesel, Carel J. M.;
- Reinten, Roy J.;
- Nagtegaal, Iris D.;
- Koopman, Miriam;
- Punt, Cornelis J. A.;
- Vermeulen, Louis
Publication type:
Article
Investigation of Perylene Photonic Wires by Combined Single-Molecule Fluorescence and Atomic Force MicroscopyThe authors thank E. E. Neuteboom, S. C. J. Meskers and R. A. J. Janssen for providing with the monomer precursor for the perylene polymer synthesis and their help with the ensemble fluorescence lifetime measurements. Financial support from the EC SMARTON network is gratefully acknowledged. J.H. thanks the EC Program IHP-99 for a Marie Curie Fellowship (HPMF-CT-2002-01698). E.M.H.P.v.D. thanks the support by Dutch Foundation for Fundamental Research of Matter (FOM). M.F.G.P. acknowledges support from KNAW.
Published in:
Angewandte Chemie, 2004, v. 116, n. 31, p. 4137, doi. 10.1002/ange.200453745
By:
- Jordi Hernando;
- Pieter A. J. de Witte;
- Erik M. H.P van Dijk;
- Jeroen Korterik;
- Roeland J. M. Nolte;
- Alan E. Rowan;
- María F. García-Parajó;
- Niek F. van Hulst
Publication type:
Article
Longitudinal characteristics of T2-FLAIR mismatch in IDH-mutant astrocytomas: Relation to grade, histopathology, and overall survival in the GLASS-NL cohort.
Published in:
Neuro-Oncology Advances, 2023, v. 5, n. 1, p. 1, doi. 10.1093/noajnl/vdad149
By:
- Garderen, Karin A van;
- Vallentgoed, Wies R;
- Lavrova, Anna;
- Niers, Johanna M;
- Leng, Wendy W J de;
- Hoogstrate, Youri;
- Heer, Iris de;
- Ylstra, Bauke;
- Dijk, Erik van;
- Klein, Stefan;
- Draaisma, Kaspar;
- Robe, Pierre A J T;
- Verhaak, Roel G W;
- Westerman, Bart A;
- French, Pim J;
- Bent, Martin J van den;
- Kouwenhoven, Mathilde C M;
- Kros, Johan M;
- Wesseling, Pieter;
- Smits, Marion
Publication type:
Article
Computational Screening of Tip and Stalk Cell Behavior Proposes a Role for Apelin Signaling in Sprout Progression.
Published in:
PLoS ONE, 2016, v. 11, n. 11, p. 1, doi. 10.1371/journal.pone.0159478
By:
- Palm, Margriet M.;
- Dallinga, Marchien G.;
- van Dijk, Erik;
- Klaassen, Ingeborg;
- Schlingemann, Reinier O.;
- Merks, Roeland M. H.
Publication type:
Article
Investigation of Perylene Photonic Wires by Combined Single-Molecule Fluorescence and Atomic Force MicroscopyThe authors thank E. E. Neuteboom, S. C. J. Meskers and R. A. J. Janssen for providing with the monomer precursor for the perylene polymer synthesis and their help with the ensemble fluorescence lifetime measurements. Financial support from the EC SMARTON network is gratefully acknowledged. J.H. thanks the EC Program IHP-99 for a Marie Curie Fellowship (HPMF-CT-2002-01698). E.M.H.P.v.D. thanks the support by Dutch Foundation for Fundamental Research of Matter (FOM). M.F.G.P. acknowledges support from KNAW.
Published in:
Angewandte Chemie International Edition, 2004, v. 43, n. 31, p. 4045, doi. 10.1002/anie.200453745
By:
- Jordi Hernando;
- Pieter A. J. de Witte;
- Erik M. H.P van Dijk;
- Jeroen Korterik;
- Roeland J. M. Nolte;
- Alan E. Rowan;
- María F. García-Parajó;
- Niek F. van Hulst
Publication type:
Article
How sticky are our proteins? Quantifying hydrophobicity of the human proteome.
Published in:
Bioinformatics Advances, 2022, v. 2, n. 1, p. 1, doi. 10.1093/bioadv/vbac002
By:
- Gils, Juami Hermine Mariama van;
- Gogishvili, Dea;
- Eck, Jan van;
- Bouwmeester, Robbin;
- Dijk, Erik van;
- Abeln, Sanne
Publication type:
Article
The hydrophobic effect characterises the thermodynamic signature of amyloid fibril growth.
Published in:
PLoS Computational Biology, 2020, v. 16, n. 5, p. 1, doi. 10.1371/journal.pcbi.1007767
By:
- van Gils, Juami Hermine Mariama;
- van Dijk, Erik;
- Peduzzo, Alessia;
- Hofmann, Alexander;
- Vettore, Nicola;
- Schützmann, Marie P.;
- Groth, Georg;
- Mouhib, Halima;
- Otzen, Daniel E.;
- Buell, Alexander K.;
- Abeln, Sanne
Publication type:
Article
Coarse-grained versus atomistic simulations: realistic interaction free energies for real proteins.
Published in:
Bioinformatics, 2014, v. 30, n. 3, p. 326, doi. 10.1093/bioinformatics/btt675
By:
- May, Ali;
- Pool, René;
- van Dijk, Erik;
- Bijlard, Jochem;
- Abeln, Sanne;
- Heringa, Jaap;
- Feenstra, K. Anton
Publication type:
Article

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