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Genome sequence and emended description of Leisingera nanhaiensis strain DSM 24252 isolated from marine sediment.
Published in:
Standards in Genomic Sciences, 2014, v. 9, n. 3, p. 687, doi. 10.4056/sigs.3828824
By:
- Breider, Sven;
- Teshima, Hazuki;
- Petersen, Jörn;
- Chertkov, Olga;
- Dalingault, Hajnalka;
- Chen, Amy;
- Pati, Amrita;
- Ivanova, Natalia;
- Lapidus, Alla;
- Goodwin, Lynne;
- Chain, Patrick;
- Detter, John;
- Rohde, Manfred;
- Tindall, Brian;
- Kyrpides, Nikos;
- Woyke, Tanja;
- Simon, Meinhard;
- Göker, Markus;
- Klenk, Hans-Peter;
- Brinkhoff, Thorsten
Publication type:
Article
Permanent draft genome sequences of the symbiotic nitrogen fixing Ensifer meliloti strains BO21CC and AK58.
Published in:
Standards in Genomic Sciences, 2013, v. 9, n. 2, p. 325, doi. 10.4056/sigs.3797438
By:
- Galardini, Marco;
- Bazzicalupo, Marco;
- Biondi, Emanuele;
- Brambilla, Eveline;
- Brilli, Matteo;
- Bruce, David;
- Chain, Patrick;
- Chen, Amy;
- Daligault, Hajnalka;
- Davenport, Karen;
- Deshpande, Shweta;
- Detter, John;
- Goodwin, Lynne;
- Han, Cliff;
- Han, James;
- Huntemann, Marcel;
- Ivanova, Natalia;
- Klenk, Hans-Peter;
- Kyrpides, Nikos;
- Markowitz, Victor
Publication type:
Article
Genome sequence of Phaeobacter inhibens type strain (T5), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens.
Published in:
Standards in Genomic Sciences, 2013, v. 9, n. 2, p. 334, doi. 10.4056/sigs.4448212
By:
- Dogs, Marco;
- Voget, Sonja;
- Teshima, Hazuki;
- Petersen, Jörn;
- Davenport, Karen;
- Dalingault, Hajnalka;
- Chen, Amy;
- Pati, Amrita;
- Ivanova, Natalia;
- Goodwin, Lynne;
- Chain, Patrick;
- Detter, John;
- Standfest, Sonja;
- Rohde, Manfred;
- Gronow, Sabine;
- Kyrpides, Nikos;
- Woyke, Tanja;
- Simon, Meinhard;
- Klenk, Hans-Peter;
- Göker, Markus
Publication type:
Article
Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134).
Published in:
Standards in Genomic Sciences, 2013, v. 9, n. 1, p. 28, doi. 10.4056/sigs.4207886
By:
- Meier-Kolthoff, Jan;
- Lu, Megan;
- Huntemann, Marcel;
- Lucas, Susan;
- Lapidus, Alla;
- Copeland, Alex;
- Pitluck, Sam;
- Goodwin, Lynne;
- Han, Cliff;
- Tapia, Roxanne;
- Pötter, Gabriele;
- Land, Miriam;
- Ivanova, Natalia;
- Rohde, Manfred;
- Göker, Markus;
- Detter, John;
- Woyke, Tanja;
- Kyrpides, Nikos;
- Klenk, Hans-Peter
Publication type:
Article
Genome sequence of Phaeobacter daeponensis type strain (DSM 23529), a facultatively anaerobic bacterium isolated from marine sediment, and emendation of Phaeobacter daeponensis.
Published in:
Standards in Genomic Sciences, 2013, v. 9, n. 1, p. 142, doi. 10.4056/sigs.4287962
By:
- Dogs, Marco;
- Teshima, Hazuki;
- Petersen, Jörn;
- Fiebig, Anne;
- Chertkov, Olga;
- Dalingault, Hajnalka;
- Chen, Amy;
- Pati, Amrita;
- Goodwin, Lynne;
- Chain, Patrick;
- Detter, John;
- Ivanova, Natalia;
- Lapidus, Alla;
- Rohde, Manfred;
- Gronow, Sabine;
- Kyrpides, Nikos;
- Woyke, Tanja;
- Simon, Meinhard;
- Göker, Markus;
- Klenk, Hans-Peter
Publication type:
Article
Complete genome sequence of the marine methyl-halide oxidizing Leisingera methylohalidivorans type strain (DSM 14336), a representative of the Roseobacter clade.
Published in:
Standards in Genomic Sciences, 2013, v. 9, n. 1, p. 128, doi. 10.4056/sigs.4297965
By:
- Buddruhs, Nora;
- Chertkov, Olga;
- Petersen, Jörn;
- Fiebig, Anne;
- Chen, Amy;
- Pati, Amrita;
- Ivanova, Natalia;
- Lapidus, Alla;
- Goodwin, Lynne;
- Chain, Patrick;
- Detter, John;
- Gronow, Sabine;
- Kyrpides, Nikos;
- Woyke, Tanja;
- Göker, Markus;
- Brinkhoff, Thorsten;
- Klenk, Hans-Peter
Publication type:
Article
Genome sequence of Phaeobacter caeruleus type strain (DSM 24564), a surface-associated member of the marine Roseobacter clade.
Published in:
Standards in Genomic Sciences, 2013, v. 8, n. 3, p. 403, doi. 10.4056/sigs.3927626
By:
- Beyersmann, Paul;
- Chertkov, Olga;
- Petersen, Jörn;
- Fiebig, Anne;
- Chen, Amy;
- Pati, Amrita;
- Ivanova, Natalia;
- Lapidus, Alla;
- Goodwin, Lynne;
- Chain, Patrick;
- Detter, John;
- Rohde, Manfred;
- Gronow, Sabine;
- Kyrpides, Nikos;
- Woyke, Tanja;
- Simon, Meinhard;
- Göker, Markus;
- Klenk, Hans-Peter;
- Brinkhoff, Thorsten
Publication type:
Article
Genome sequence of the Leisingera aquimarina type strain (DSM 24565), a member of the marine Roseobacter clade rich in extrachromosomal elements.
Published in:
Standards in Genomic Sciences, 2013, v. 8, n. 3, p. 389, doi. 10.4056/sigs.3858183
By:
- Riedel, Thomas;
- Teshima, Hazuki;
- Petersen, Jörn;
- Fiebig, Anne;
- Davenport, Karen;
- Daligault, Hajnalka;
- Erkkila, Tracy;
- Gu, Wei;
- Munk, Christine;
- Xu, Yan;
- Chen, Amy;
- Pati, Amrita;
- Ivanova, Natalia;
- Goodwin, Lynne;
- Chain, Patrick;
- Detter, John;
- Rohde, Manfred;
- Gronow, Sabine;
- Kyrpides, Nikos;
- Woyke, Tanja
Publication type:
Article
Genome sequence of the phage-gene rich marine Phaeobacter arcticus type strain DSM 23566.
Published in:
Standards in Genomic Sciences, 2013, v. 8, n. 3, p. 450, doi. 10.4056/sigs.383362
By:
- Freese, Heike;
- Dalingault, Hajnalka;
- Petersen, Jörn;
- Pradella, Silke;
- Davenport, Karen;
- Teshima, Hazuki;
- Chen, Amy;
- Pati, Amrita;
- Ivanova, Natalia;
- Goodwin, Lynne;
- Chain, Patrick;
- Detter, John;
- Rohde, Manfred;
- Gronow, Sabine;
- Kyrpides, Nikos;
- Woyke, Tanja;
- Brinkhoff, Thorsten;
- Göker, Markus;
- Overmann, Jörg;
- Klenk, Hans-Peter
Publication type:
Article
Complete genome sequence of Halorhodospira halophila SL1.
Published in:
Standards in Genomic Sciences, 2013, v. 8, n. 2, p. 206, doi. 10.4056/sigs.3677284
By:
- Challacombe, Jean;
- Majid, Sophia;
- Deole, Ratnakar;
- Brettin, Thomas;
- Bruce, David;
- Delano, Susana;
- Detter, John;
- Gleasner, Cheryl;
- Han, Cliff;
- Misra, Monica;
- Reitenga, Krista;
- Mikhailova, Natalia;
- Woyke, Tanja;
- Pitluck, Sam;
- Nolan, Matt;
- Land, Miriam;
- Saunders, Elizabeth;
- Tapia, Roxanne;
- Lapidus, Alla;
- Ivanova, Natalia
Publication type:
Article
Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DLT).
Published in:
Standards in Genomic Sciences, 2012, v. 7, n. 2, p. 304, doi. 10.4056/sigs.3226659
By:
- Spring, Stefan;
- Visser, Michael;
- Lu, Megan;
- Copeland, Alex;
- Lapidus, Alla;
- Lucas, Susan;
- Jan-Fang Cheng;
- Han, Cliff;
- Tapia, Roxanne;
- Goodwin, Lynne A.;
- Pitluck, Sam;
- Ivanova, Natalia;
- Land, Miriam;
- Hauser, Loren;
- Larimer, Frank;
- Rohde, Manfred;
- Göker, Markus;
- Detter, John C.;
- Kyrpides, Nikos C.;
- Woyke, Tanja
Publication type:
Article
Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093T).
Published in:
2012
By:
- Kappler, Ulrike;
- Davenport, Karen;
- Beatson, Scott;
- Lucas, Susan;
- Lapidus, Alla;
- Copeland, Alex;
- Berry, Kerrie W.;
- Del Rio, Tijana Glavina;
- Hammon, Nancy;
- Dalin, Eileen;
- Tice, Hope;
- Pitluck, Sam;
- Richardson, Paul;
- Bruce, David;
- Goodwin, Lynne A.;
- Han, Cliff;
- Tapia, Roxanne;
- Detter, John C.;
- Chang, Yun-juan;
- Jeffries, Cynthia D.
Publication type:
Art Reproduction
Complete genome sequence of the plant-associated Serratia plymuthica strain AS13.
Published in:
Standards in Genomic Sciences, 2012, v. 7, n. 1, p. 22, doi. 10.4056/sigs.2966299
By:
- Neupane, Saraswoti;
- Finlay, Roger D.;
- Kyrpides, Nikos C.;
- Goodwin, Lynne;
- Alström, Sadhna;
- Lucas, Susan;
- Land, Miriam;
- Han, James;
- Lapidus, Alla;
- Jan-Fang Cheng;
- Bruce, David;
- Pitluck, Sam;
- Peters, Lin;
- Ovchinnikova, Galina;
- Held, Brittany;
- Cliff Han;
- Detter, John C.;
- Tapia, Roxanne;
- Hauser, Loren;
- Ivanova, Natalia
Publication type:
Article
Arrangement of the Clostridium baratii F7 Toxin Gene Cluster with Identification of a σ Factor That Recognizes the Botulinum Toxin Gene Cluster Promoters.
Published in:
PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0097983
By:
- Dover, Nir;
- Barash, Jason R.;
- Burke, Julianne N.;
- Hill, Karen K.;
- Detter, John C.;
- Arnon, Stephen S.
Publication type:
Article
Genome Analysis and Physiological Comparison of Alicycliphilus denitrificans Strains BC and K601T.
Published in:
PLoS ONE, 2013, v. 8, n. 6, p. 1, doi. 10.1371/journal.pone.0066971
By:
- Oosterkamp, Margreet J.;
- Veuskens, Teun;
- Talarico Saia, Flávia;
- Weelink, Sander A. B.;
- Goodwin, Lynne A.;
- Daligault, Hajnalka E.;
- Bruce, David C.;
- Detter, John C.;
- Tapia, Roxanne;
- Han, Cliff S.;
- Land, Miriam L.;
- Hauser, Loren J.;
- Langenhoff, Alette A. M.;
- Gerritse, Jan;
- van Berkel, Willem J. H.;
- Pieper, Dietmar H.;
- Junca, Howard;
- Smidt, Hauke;
- Schraa, Gosse;
- Davids, Mark
Publication type:
Article
Identification of novel simple sequence length polymorphisms (SSLPs) in mouse by interspersed repetitive element (IRE)‐PCR.
Published in:
Nucleic Acids Research, 1998, v. 26, n. 17, p. 4091, doi. 10.1093/nar/26.17.4091
By:
- Detter, John C.;
- Nguyen, Quan A.;
- Kingsmore, Stephen F.
Publication type:
Article
Characterization of a diesel sludge microbial consortia for bioremediation.
Published in:
Scanning, 2005, v. 27, n. 1, p. 8, doi. 10.1002/sca.4950270103
By:
- Vrdoljak, Gordon;
- Feil, William S.;
- Feil, Helene;
- Detter, John C.;
- Fields, Phillip
Publication type:
Article
Exception to the Rule: Genomic Characterization of Naturally Occurring Unusual Vibrio cholerae Strains with a Single Chromosome.
Published in:
International Journal of Genomics, 2017, p. 1, doi. 10.1155/2017/8724304
By:
- Xie, Gary;
- Johnson, Shannon L.;
- Davenport, Karen W.;
- Rajavel, Mathumathi;
- Waldminghaus, Torsten;
- Detter, John C.;
- Chain, Patrick S.;
- Sozhamannan, Shanmuga
Publication type:
Article
The genome of the Gram-positive metal- and sulfate-reducing bacterium Desulfotomaculum reducens strain MI-1.
Published in:
Environmental Microbiology, 2010, v. 12, n. 10, p. 2738, doi. 10.1111/j.1462-2920.2010.02242.x
By:
- Junier, Pilar;
- Junier, Thomas;
- Podell, Sheila;
- Sims, David R.;
- Detter, John C.;
- Lykidis, Athanasios;
- Han, Cliff S.;
- Wigginton, Nicholas S.;
- Gaasterland, Terry;
- Bernier-Latmani, Rizlan
Publication type:
Article
The complete genome sequence of Moorella thermoacetica (f. Clostridium thermoaceticum).
Published in:
Environmental Microbiology, 2008, v. 10, n. 10, p. 2550, doi. 10.1111/j.1462-2920.2008.01679.x
By:
- Pierce, Elizabeth;
- Xie, Gary;
- Barabote, Ravi D.;
- Saunders, Elizabeth;
- Han, Cliff S.;
- Detter, John C.;
- Richardson, Paul;
- Brettin, Thomas S.;
- Das, Amaresh;
- Ljungdahl, Lars G.;
- Ragsdale, Stephen W.
Publication type:
Article
Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains.
Published in:
PLoS Biology, 2014, v. 12, n. 8, p. 1, doi. 10.1371/journal.pbio.1001920
By:
- Kyrpides, Nikos C.;
- Hugenholtz, Philip;
- Eisen, Jonathan A.;
- Woyke, Tanja;
- Göker, Markus;
- Parker, Charles T.;
- Amann, Rudolf;
- Beck, Brian J.;
- Chain, Patrick S. G.;
- Chun, Jongsik;
- Colwell, Rita R.;
- Danchin, Antoine;
- Dawyndt, Peter;
- Dedeurwaerdere, Tom;
- DeLong, Edward F.;
- Detter, John C.;
- De Vos, Paul;
- Donohue, Timothy J.;
- Dong, Xiu-Zhu;
- Ehrlich, Dusko S.
Publication type:
Article
Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34.
Published in:
Standards in Genomic Sciences, 2016, v. 11, p. 1, doi. 10.1186/s40793-016-0194-2
By:
- Anderson, Iain J.;
- DasSarma, Priya;
- Lucas, Susan;
- Copeland, Alex;
- Lapidus, Alla;
- Del Rio, Tijana Glavina;
- Tice, Hope;
- Dalin, Eileen;
- Bruce, David C.;
- Goodwin, Lynne;
- Pitluck, Sam;
- Sims, David;
- Brettin, Thomas S.;
- Detter, John C.;
- Han, Cliff S.;
- Larimer, Frank;
- Hauser, Loren;
- Land, Miriam;
- Ivanova, Natalia;
- Richardson, Paul
Publication type:
Article

Found: 22

Genome sequence and emended description of Leisingera nanhaiensis strain DSM 24252 isolated from marine sediment.

Permanent draft genome sequences of the symbiotic nitrogen fixing Ensifer meliloti strains BO21CC and AK58.

Genome sequence of Phaeobacter inhibens type strain (T5), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens.

Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134).

Genome sequence of Phaeobacter daeponensis type strain (DSM 23529), a facultatively anaerobic bacterium isolated from marine sediment, and emendation of Phaeobacter daeponensis.

Complete genome sequence of the marine methyl-halide oxidizing Leisingera methylohalidivorans type strain (DSM 14336), a representative of the Roseobacter clade.

Genome sequence of Phaeobacter caeruleus type strain (DSM 24564), a surface-associated member of the marine Roseobacter clade.

Genome sequence of the Leisingera aquimarina type strain (DSM 24565), a member of the marine Roseobacter clade rich in extrachromosomal elements.

Genome sequence of the phage-gene rich marine Phaeobacter arcticus type strain DSM 23566.

Complete genome sequence of Halorhodospira halophila SL1.

Complete genome sequence of the sulfate-reducing firmicute Desulfotomaculum ruminis type strain (DL<sup>T</sup>).

Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093<sup>T</sup>).

Complete genome sequence of the plant-associated Serratia plymuthica strain AS13.

Arrangement of the <i>Clostridium baratii</i> F7 Toxin Gene Cluster with Identification of a σ Factor That Recognizes the Botulinum Toxin Gene Cluster Promoters.

Genome Analysis and Physiological Comparison of <i>Alicycliphilus denitrificans</i> Strains BC and K601<sup>T</sup>.

Identification of novel simple sequence length polymorphisms (SSLPs) in mouse by interspersed repetitive element (IRE)‐PCR.

Characterization of a diesel sludge microbial consortia for bioremediation.

Exception to the Rule: Genomic Characterization of Naturally Occurring Unusual Vibrio cholerae Strains with a Single Chromosome.

The genome of the Gram-positive metal- and sulfate-reducing bacterium Desulfotomaculum reducens strain MI-1.

The complete genome sequence of Moorella thermoacetica (f. Clostridium thermoaceticum).

Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains.

Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34.