Works by Deng, Pingchuan

Results: 41

Population‐level transcriptomes reveal gene expression and splicing underlying cadmium accumulation in barley.

Published in:

Plant Journal, 2022, v. 112, n. 3, p. 847, doi. 10.1111/tpj.15986

By:

Deng, Pingchuan;
Yan, Tao;
Ji, Wanquan;
Zhang, Guoping;
Wu, Liang;
Wu, Dezhi

Publication type:

Article

Comparative Analysis of Asteraceae Chloroplast Genomes: Structural Organization, RNA Editing and Evolution.

Published in:

Plant Molecular Biology Reporter, 2015, v. 33, n. 5, p. 1526, doi. 10.1007/s11105-015-0853-2

By:

Wang, Mengxing;
Cui, Licao;
Feng, Kewei;
Deng, Pingchuan;
Du, Xianghong;
Wan, Fanghao;
Weining, Song;
Nie, Xiaojun

Publication type:

Article

Comparative analysis of codon usage patterns in chloroplast genomes of the Asteraceae family.

Published in:

Plant Molecular Biology Reporter, 2014, v. 32, n. 4, p. 828, doi. 10.1007/s11105-013-0691-z

By:

Nie, Xiaojun;
Deng, Pingchuan;
Feng, Kewei;
Liu, Peixun;
Du, Xianghong;
You, Frank;
Weining, Song

Publication type:

Article

Computational Identification and Comparative Analysis of miRNAs in Wheat Group 7 Chromosomes.

Published in:

Plant Molecular Biology Reporter, 2014, v. 32, n. 2, p. 487, doi. 10.1007/s11105-013-0669-x

By:

Deng, Pingchuan;
Nie, Xiaojun;
Wang, Le;
Cui, Licao;
Liu, Peixun;
Tong, Wei;
Biradar, Siddanagouda;
Edwards, David;
Berkman, Paul;
Šimková, Hana;
Doležel, Jaroslav;
Luo, Mincheng;
You, Frank;
Batley, Jacqueline;
Fleury, Delphine;
Appels, Rudi;
Weining, Song

Publication type:

Article

Combined GWAS and eGWAS reveals the genetic basis underlying drought tolerance in emmer wheat (Triticum turgidum L.).

Published in:

New Phytologist, 2024, v. 242, n. 5, p. 2115, doi. 10.1111/nph.19589

By:

Yang, Guang;
Pan, Yan;
Pan, Wenqiu;
Song, Qingting;
Zhang, Ruoyu;
Tong, Wei;
Cui, Licao;
Ji, Wanquan;
Song, Weining;
Song, Baoxing;
Deng, Pingchuan;
Nie, Xiaojun

Publication type:

Article

Pesticide application has little influence on coding and non-coding gene expressions in rice.

Published in:

BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6381-y

By:

Muhammad, Sajid;
Tan, Jingai;
Deng, Pingchuan;
Li, Tingting;
He, Haohua;
Bian, Jianmin;
Wu, Liang

Publication type:

Article

Characteristics and Expression Analysis of Invertase Gene Family in Common Wheat (Triticum aestivum L.).

Published in:

Genes, 2023, v. 14, n. 1, p. 41, doi. 10.3390/genes14010041

By:

Wang, Chao;
Wang, Guanghao;
Wen, Xinyu;
Qu, Xiaojian;
Zhang, Yaoyuan;
Zhang, Xiangyu;
Deng, Pingchuan;
Chen, Chunhuan;
Ji, Wanquan;
Zhang, Hong

Publication type:

Article

Genome-Wide Identification and Characterization of Salinity Stress-Responsive miRNAs in Wild Emmer Wheat (Triticum turgidum ssp. dicoccoides).

Published in:

Genes, 2017, v. 8, n. 6, p. 156, doi. 10.3390/genes8060156

By:

Kewei Feng;
Xiaojun Nie;
Licao Cui;
Pingchuan Deng;
Mengxing Wang;
Weining Song

Publication type:

Article

Genome-Wide Comparative Analysis of the Cytochrome P450 Monooxygenase Family in 19 Aphid Species and Their Expression Analysis in 4 Cereal Crop Aphids.

Published in:

International Journal of Molecular Sciences, 2024, v. 25, n. 12, p. 6668, doi. 10.3390/ijms25126668

By:

Wang, Zhenyu;
Hao, Weixi;
Wang, Hao;
Deng, Pingchuan;
Li, Tingdong;
Wang, Changyou;
Zhao, Jixin;
Chen, Chunhuan;
Ji, Wanquan;
Liu, Xinlun

Publication type:

Article

Intra-Varietal Diversity and Its Contribution to Wheat Evolution, Domestication, and Improvement in Wheat.

Published in:

International Journal of Molecular Sciences, 2023, v. 24, n. 12, p. 10217, doi. 10.3390/ijms241210217

By:

Li, Tianbao;
Kong, Chuizheng;
Deng, Pingchuan;
Li, Chengdao;
Zhao, Guangyao;
Li, Hongjie;
Gao, Lifeng;
Cui, Dangqun;
Jia, Jizeng

Publication type:

Article

Molecular Cytological Analysis and Specific Marker Development in Wheat- Psathyrostachys huashanica Keng 3Ns Additional Line with Elongated Glume.

Published in:

International Journal of Molecular Sciences, 2023, v. 24, n. 7, p. 6726, doi. 10.3390/ijms24076726

By:

Pang, Jingyu;
Huang, Chenxi;
Wang, Yuesheng;
Wen, Xinyu;
Deng, Pingchuan;
Li, Tingdong;
Wang, Changyou;
Liu, Xinlun;
Chen, Chunhuan;
Zhao, Jixin;
Ji, Wanquan

Publication type:

Article

Identification of Differentially Expressed Genes in Resistant Tetraploid Wheat (Triticum turgidum) under Sitobion avenae (F.) Infestation.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 11, p. 6012, doi. 10.3390/ijms23116012

By:

Liu, Xinlun;
Kou, Xudan;
Bai, Shichao;
Luo, Yufeng;
Wang, Zhenyu;
Xie, Lincai;
Deng, Pingchuan;
Zhang, Hong;
Wang, Changyou;
Wang, Yajuan;
Zhao, Jixin;
Ji, Wanquan

Publication type:

Article

Identification and DNA Marker Development for a Wheat- Leymus mollis 2Ns (2D) Disomic Chromosome Substitution.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 5, p. 2676, doi. 10.3390/ijms23052676

By:

Feng, Xianbo;
Du, Xin;
Wang, Siwen;
Deng, Pingchuan;
Wang, Yongfu;
Shang, Lihui;
Tian, Zengrong;
Wang, Changyou;
Chen, Chunhuan;
Zhao, Jixin;
Ji, Wanquan

Publication type:

Article

Transcriptional Dynamics of Grain Development in Barley (Hordeum vulgare L.).

Published in:

International Journal of Molecular Sciences, 2019, v. 20, n. 4, p. 962, doi. 10.3390/ijms20040962

By:

Bian, Jianxin;
Deng, Pingchuan;
Zhan, Haoshuang;
Wu, Xiaotong;
Nishantha, Mutthanthirige D. L. C.;
Yan, Zhaogui;
Du, Xianghong;
Nie, Xiaojun;
Song, Weining

Publication type:

Article

Molecular cytogenetics and development of St-chromosome-specific molecular markers of novel stripe rust resistant wheat–Thinopyrum intermedium and wheat–Thinopyrum ponticum substitution lines.

Published in:

BMC Plant Biology, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12870-022-03496-x

By:

Wang, Siwen;
Wang, Changyou;
Feng, Xianbo;
Zhao, Jixin;
Deng, Pingchuan;
Wang, Yajuan;
Zhang, Hong;
Liu, Xinlun;
Li, Tingdong;
Chen, Chunhuan;
Wang, Baotong;
Ji, Wanquan

Publication type:

Article

Molecular cytogenetics for a wheat–Aegilops geniculata 3M<sup>g</sup> alien addition line with resistance to stripe rust and powdery mildew.

Published in:

BMC Plant Biology, 2021, v. 21, n. 1, p. 1, doi. 10.1186/s12870-021-03360-4

By:

Wang, Yongfu;
Cheng, Xiaofang;
Yang, Xiaoying;
Wang, Changyou;
Zhang, Hong;
Deng, Pingchuan;
Liu, Xinlun;
Chen, Chunhuan;
Ji, Wanquan;
Wang, Yajuan

Publication type:

Article

Switching action modes of miR408-5p mediates auxin signaling in rice.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-46765-z

By:

Rong, Fuxi;
Lv, Yusong;
Deng, Pingchuan;
Wu, Xia;
Zhang, Yaqi;
Yue, Erkui;
Shen, Yuxin;
Muhammad, Sajid;
Ni, Fangrui;
Bian, Hongwu;
Wei, Xiangjin;
Zhou, Weijun;
Hu, Peisong;
Wu, Liang

Publication type:

Article

LncRNAs are cool regulators in cold exposure in plants.

Published in:

SCIENCE CHINA Life Sciences, 2019, v. 62, n. 7, p. 978, doi. 10.1007/s11427-019-9575-3

By:

Deng, Pingchuan;
Wu, Liang

Publication type:

Article

Conservation analysis of long non-coding RNAs in plants.

Published in:

SCIENCE CHINA Life Sciences, 2018, v. 61, n. 2, p. 190, doi. 10.1007/s11427-017-9174-9

By:

Deng, Pingchuan;
Liu, Shu;
Nie, Xiaojun;
Weining, Song;
Wu, Liang

Publication type:

Article

Physical mapping of a new powdery mildew resistance locus from Thinopyrum ponticum chromosome 4AgS.

Published in:

Frontiers in Plant Science, 2023, v. 14, p. 1, doi. 10.3389/fpls.2023.1131205

By:

Guotang Yang;
Pingchuan Deng;
Wanquan Ji;
Shulan Fu;
Hongwei Li;
Bin Li;
Zhensheng Li;
Qi Zheng

Publication type:

Article

Cytogenetic identification and molecular marker development of a novel wheat-Leymus mollis 4Ns(4D) alien disomic substitution line with resistance to stripe rust and Fusarium head blight.

Published in:

Frontiers in Plant Science, 2022, v. 13, p. 01, doi. 10.3389/fpls.2022.1012939

By:

Xin Du;
Xianbo Feng;
Ruoxuan Li;
Yanlong Jin;
Lihui Shang;
Jixin Zhao;
Changyou Wang;
Tingdong Li;
Chunhuan Chen;
Zengrong Tian;
Pingchuan Deng;
Wanquan Ji

Publication type:

Article

Complexity and regulation of age-dependent alternative splicing in Brachypodium distachyon.

Published in:

Plant Physiology, 2023, v. 192, n. 4, p. 2703, doi. 10.1093/plphys/kiad223

By:

Yuxin Shen;
Zhengrui Qin;
Gaojie Ren;
Pingchuan Deng;
Wanquan Ji;
Chen Jiao;
Liang Wu

Publication type:

Article

Cytogenetic identification and molecular mapping for the wheat-Thinopyrum ponticum introgression line with resistance to Fusarium head blight.

Published in:

Theoretical & Applied Genetics, 2024, v. 137, n. 8, p. 1, doi. 10.1007/s00122-024-04686-x

By:

Yang, Xiaoying;
Cheng, Xiaofang;
Wang, Guangyi;
Song, Siyuan;
Ding, Xu;
Xiong, Hui;
Wang, Changyou;
Zhao, Jixin;
Li, Tingdong;
Deng, Pingchuan;
Liu, Xinlun;
Chen, Chunhuan;
Ji, Wanquan

Publication type:

Article

GenoBaits®WheatplusEE: a targeted capture sequencing panel for quick and accurate identification of wheat–Thinopyrum derivatives.

Published in:

Theoretical & Applied Genetics, 2024, v. 137, n. 2, p. 1, doi. 10.1007/s00122-023-04538-0

By:

Deng, Pingchuan;
Du, Xin;
Wang, Yanzhen;
Yang, Xiaoying;
Cheng, Xiaofang;
Huang, Chenxi;
Li, Tingting;
Li, Tingdong;
Chen, Chunhuan;
Zhao, Jixin;
Wang, Changyou;
Liu, Xinlun;
Tian, Zengrong;
Ji, Wanquan

Publication type:

Article

An intron-located single nucleotide variation of TaGS5-3D is related to wheat grain size through accumulating intron retention transcripts.

Published in:

Theoretical & Applied Genetics, 2023, v. 136, n. 9, p. 1, doi. 10.1007/s00122-023-04439-2

By:

Zhang, Yaoyuan;
Miao, Hanxiao;
Xiao, Yi;
Wang, Chao;
Zhang, Junjie;
Shi, Xiaoxi;
Xie, Songfeng;
Wang, Changyou;
Li, Tingdong;
Deng, Pingchuan;
Chen, Chunhuan;
Zhang, Hong;
Ji, Wanquan

Publication type:

Article

The improved assembly of 7DL chromosome provides insight into the structure and evolution of bread wheat.

Published in:

Plant Biotechnology Journal, 2020, v. 18, n. 3, p. 732, doi. 10.1111/pbi.13240

By:

Feng, Kewei;
Cui, Licao;
Wang, Le;
Shan, Dai;
Tong, Wei;
Deng, Pingchuan;
Yan, Zhaogui;
Wang, Mengxing;
Zhan, Haoshuang;
Wu, Xiaotong;
He, Weiming;
Zhou, Xianqiang;
Ji, Jingjing;
Zhang, Guiping;
Mao, Long;
Karafiátová, Miroslava;
Šimková, Hana;
Doležel, Jaroslav;
Du, Xianghong;
Zhao, Shancen

Publication type:

Article

Biogenesis and regulatory hierarchy of phased small interfering RNAs in plants.

Published in:

Plant Biotechnology Journal, 2018, v. 16, n. 5, p. 965, doi. 10.1111/pbi.12882

By:

Deng, Pingchuan;
Muhammad, Sajid;
Cao, Min;
Wu, Liang

Publication type:

Article

Global Identification of MicroRNAs and Their Targets in Barley under Salinity Stress.

Published in:

PLoS ONE, 2015, v. 10, n. 9, p. 1, doi. 10.1371/journal.pone.0137990

By:

Deng, Pingchuan;
Wang, Le;
Cui, Licao;
Feng, Kewei;
Liu, Fuyan;
Du, Xianghong;
Tong, Wei;
Nie, Xiaojun;
Ji, Wanquan;
Weining, Song

Publication type:

Article

Characterization and Fine Mapping of the Stay-Green-Related Spot Leaf Gene TaSpl1 with Enhanced Stripe Rust and Powdery Mildew Resistance in Wheat.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 9, p. 4002, doi. 10.3390/ijms26094002

By:

Xu, Xiaomin;
Du, Xin;
Jin, Yanlong;
Wang, Yanzhen;
Wang, Zhenyu;
Zhao, Jixin;
Wang, Changyou;
Liu, Xinlun;
Chen, Chunhuan;
Deng, Pingchuan;
Li, Tingdong;
Ji, Wanquan

Publication type:

Article

Comparative transcriptomes reveal insights into different host responses associated with Fusarium head blight resistance in wheat.

Published in:

BMC Plant Biology, 2025, p. 1, doi. 10.1186/s12870-025-06553-3

By:

Wang, Hao;
Yang, Xiaoying;
Li, Tingting;
Li, Zuchun;
Zhao, Jianing;
Wang, Zi;
Wang, Zhenyu;
Li, Tingdong;
Chen, Chunhuan;
Zhao, Jixin;
Wang, Changyou;
Liu, Xinlun;
Deng, Pingchuan;
Ji, Wanquan

Publication type:

Article

Comparative transcriptomes reveal insights into different host responses associated with Fusarium head blight resistance in wheat.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. N.PAG, doi. 10.1186/s12870-025-06553-3

By:

Wang, Hao;
Yang, Xiaoying;
Li, Tingting;
Li, Zuchun;
Zhao, Jianing;
Wang, Zi;
Wang, Zhenyu;
Li, Tingdong;
Chen, Chunhuan;
Zhao, Jixin;
Wang, Changyou;
Liu, Xinlun;
Deng, Pingchuan;
Ji, Wanquan

Publication type:

Article

Chromosome karyotype and stability of new synthetic hexaploid wheat.

Published in:

Molecular Breeding, 2021, v. 41, n. 10, p. 1, doi. 10.1007/s11032-021-01253-w

By:

Wang, Yajuan;
Wang, Siwen;
Jia, Xiujuan;
Tian, Zengrong;
Wang, Yongfu;
Wang, Changyou;
Zhang, Hong;
Liu, Xinlun;
Zhao, Jixin;
Deng, Pingchuan;
Ji, Wanquan

Publication type:

Article

Genome-wide identification and characterization of lipoxygenase genes related to the English grain aphid infestation response in wheat.

Published in:

Planta: An International Journal of Plant Biology, 2023, v. 257, n. 5, p. 1, doi. 10.1007/s00425-023-04114-2

By:

Wang, Zhenyu;
Luo, Yufeng;
Yu, Jiuyang;
Kou, Xudan;
Xie, Lincai;
Deng, Pingchuan;
Li, Tingdong;
Chen, Chunhuan;
Ji, Wanquan;
Liu, Xinlun

Publication type:

Article

Population transcriptomic analysis identifies the comprehensive lncRNAs landscape of spike in wheat (Triticum aestivum L.).

Published in:

BMC Plant Biology, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12870-022-03828-x

By:

Yang, Guang;
Deng, Pingchuan;
Guo, Qifan;
Shi, Tingrui;
Pan, Wenqiu;
Cui, Licao;
Liu, Xiaoqin;
Nie, Xiaojun

Publication type:

Article

Genome-wide identification, phylogeny and expressional profiles of mitogen activated protein kinase kinase kinase (MAPKKK) gene family in bread wheat (Triticum aestivum L.).

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2993-7

By:

Meng Wang;
Hong Yue;
Kewei Feng;
Pingchuan Deng;
Weining Song;
Xiaojun Nie

Publication type:

Article

Genome-wide identification, phylogeny and expression analysis of AP2/ERF transcription factors family in Brachypodium distachyon.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2968-8

By:

Licao Cui;
Kewei Feng;
Mengxing Wang;
Meng Wang;
Pingchuan Deng;
Weining Song;
Xiaojun Nie

Publication type:

Article

Genome-wide characterization of microsatellites in Triticeae species: abundance, distribution and evolution.

Published in:

Scientific Reports, 2016, p. 32224, doi. 10.1038/srep32224

By:

Deng, Pingchuan;
Wang, Meng;
Feng, Kewei;
Cui, Licao;
Tong, Wei;
Song, Weining;
Nie, Xiaojun

Publication type:

Article

Establishment of a set of St-group wheat- Thinopyrum ponticum derivative lines conferring resistance to powdery mildew.

Published in:

Frontiers in Plant Science, 2025, p. 1, doi. 10.3389/fpls.2025.1576050

By:

Cheng, Xiaofang;
Guan, Yue;
Zhao, Jianing;
Yang, Xiaoying;
Wang, Guangyi;
Li, Tingdong;
Deng, Pingchuan;
Chen, Chunhuan;
Zhao, Jixin;
Wang, Changyou;
Liu, Xinlun;
Ji, Wanquan

Publication type:

Article

Genome-Wide Identification, Evolution, and Co-expression Network Analysis of Mitogen-Activated Protein Kinase Kinase Kinases in Brachypodium distachyon.

Published in:

Frontiers in Plant Science, 2016, p. 1, doi. 10.3389/fpls.2016.01400

By:

Kewei Feng;
Fuyan Liu;
Jinwei Zou;
Guangwei Xing;
Pingchuan Deng;
Weining Song;
Wei Tong;
Xiaojun Nie

Publication type:

Article

Divergent roles of FT-like 9 in flowering transition under different day lengths in Brachypodium distachyon.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-08785-y

By:

Qin, Zhengrui;
Bai, Yuxue;
Muhammad, Sajid;
Wu, Xia;
Deng, Pingchuan;
Wu, Jiajie;
An, Hailong;
Wu, Liang

Publication type:

Article

Characterization of microRNAs and their targets in wild barley ( Hordeum vulgare subsp. spontaneum) using deep sequencing.

Published in:

Genome, 2016, v. 59, n. 5, p. 339, doi. 10.1139/gen-2015-0224

By:

Deng, Pingchuan;
Bian, Jianxin;
Yue, Hong;
Feng, Kewei;
Wang, Mengxing;
Du, Xianghong;
Weining, Song;
Nie, Xiaojun;
Cloutier, S.

Publication type:

Article