Works matching AU Dellicour, Simon

Results: 95
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    Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico.

    Published in:
    eLife, 2023, p. 1, doi. 10.7554/eLife.82069
    By:
    • Castelán-Sánchez, Hugo G.;
    • Delaye, Luis;
    • Inward, Rhys P. D.;
    • Dellicour, Simon;
    • Gutierrez, Bernardo;
    • Martinez de la Vina, Natalia;
    • Boukadida, Celia;
    • Pybus, Oliver G.;
    • de Anda Jáuregui, Guillermo;
    • Guzmán, Plinio;
    • Flores-Garrido, Marisol;
    • Fontanelli, Óscar;
    • Hernández Rosales, Maribel;
    • Meneses, Amilcar;
    • Olmedo-Alvarez, Gabriela;
    • Heriberto Herrera-Estrella, Alfredo;
    • Sánchez-Flores, Alejandro;
    • Esteban Muñoz-Medina, José;
    • Comas-García, Andreu;
    • Gómez-Gil, Bruno
    Publication type:
    Article
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    The International Virus Bioinformatics Meeting 2023.

    Published in:
    Viruses (1999-4915), 2023, v. 15, n. 10, p. 2031, doi. 10.3390/v15102031
    By:
    • Hufsky, Franziska;
    • Abecasis, Ana B.;
    • Babaian, Artem;
    • Beck, Sebastian;
    • Brierley, Liam;
    • Dellicour, Simon;
    • Eggeling, Christian;
    • Elena, Santiago F.;
    • Gieraths, Udo;
    • Ha, Anh D.;
    • Harvey, Will;
    • Jones, Terry C.;
    • Lamkiewicz, Kevin;
    • Lovate, Gabriel L.;
    • Lücking, Dominik;
    • Machyna, Martin;
    • Nishimura, Luca;
    • Nocke, Maximilian K.;
    • Renard, Bernard Y.;
    • Sakaguchi, Shoichi
    Publication type:
    Article
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    Two Years of Genomic Surveillance in Belgium during the SARS-CoV-2 Pandemic to Attain Country-Wide Coverage and Monitor the Introduction and Spread of Emerging Variants.

    Published in:
    Viruses (1999-4915), 2022, v. 14, n. 10, p. N.PAG, doi. 10.3390/v14102301
    By:
    • Cuypers, Lize;
    • Dellicour, Simon;
    • Hong, Samuel L.;
    • Potter, Barney I.;
    • Verhasselt, Bruno;
    • Vereecke, Nick;
    • Lambrechts, Laurens;
    • Durkin, Keith;
    • Bours, Vincent;
    • Klamer, Sofieke;
    • Bayon-Vicente, Guillaume;
    • Vael, Carl;
    • Ariën, Kevin K.;
    • De Mendonca, Ricardo;
    • Soetens, Oriane;
    • Michel, Charlotte;
    • Bearzatto, Bertrand;
    • Naesens, Reinout;
    • Gras, Jeremie;
    • Vankeerberghen, Anne
    Publication type:
    Article
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    Variant Analysis of SARS-CoV-2 Genomes from Belgian Military Personnel Engaged in Overseas Missions and Operations.

    Published in:
    Viruses (1999-4915), 2021, v. 13, n. 7, p. 1359, doi. 10.3390/v13071359
    By:
    • Pirnay, Jean-Paul;
    • Selhorst, Philippe;
    • Hong, Samuel L.;
    • Cochez, Christel;
    • Potter, Barney;
    • Maes, Piet;
    • Petrillo, Mauro;
    • Dudas, Gytis;
    • Claes, Vincent;
    • Van der Beken, Yolien;
    • Verbeken, Gilbert;
    • Degueldre, Julie;
    • Dellicour, Simon;
    • Cuypers, Lize;
    • T'Sas, France;
    • Van den Eede, Guy;
    • Verhasselt, Bruno;
    • Weuts, Wouter;
    • Smets, Cedric;
    • Mertens, Jan
    Publication type:
    Article
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    Genomic sequencing of SARS-CoV-2 in Rwanda reveals the importance of incoming travelers on lineage diversity.

    Published in:
    Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25985-7
    By:
    • Butera, Yvan;
    • Mukantwari, Enatha;
    • Artesi, Maria;
    • Umuringa, Jeanne d'arc;
    • O'Toole, Áine Niamh;
    • Hill, Verity;
    • Rooke, Stefan;
    • Hong, Samuel Leandro;
    • Dellicour, Simon;
    • Majyambere, Onesphore;
    • Bontems, Sebastien;
    • Boujemla, Bouchra;
    • Quick, Josh;
    • Resende, Paola Cristina;
    • Loman, Nick;
    • Umumararungu, Esperance;
    • Kabanda, Alice;
    • Murindahabi, Marylin Milumbu;
    • Tuyisenge, Patrick;
    • Gashegu, Misbah
    Publication type:
    Article
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    Dynamics and Dispersal of Local Human Immunodeficiency Virus Epidemics Within San Diego and Across the San Diego–Tijuana Border.

    Published in:
    Clinical Infectious Diseases, 2021, v. 73, n. 7, p. e2018, doi. 10.1093/cid/ciaa1588
    By:
    • Vrancken, Bram;
    • Mehta, Sanjay R;
    • Ávila-Ríos, Santiago;
    • García-Morales, Claudia;
    • Tapia-Trejo, Daniela;
    • Reyes-Terán, Gustavo;
    • Navarro-Álvarez, Samuel;
    • Little, Susan J;
    • Hoenigl, Martin;
    • Pines, Heather A;
    • Patterson, Thomas;
    • Strathdee, Steffanie A;
    • Smith, Davey M;
    • Dellicour, Simon;
    • Chaillon, Antoine
    Publication type:
    Article
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    How fast are viruses spreading in the wild?

    Published in:
    PLoS Biology, 2024, v. 22, n. 12, p. 1, doi. 10.1371/journal.pbio.3002914
    By:
    • Dellicour, Simon;
    • Bastide, Paul;
    • Rocu, Pauline;
    • Fargette, Denis;
    • Hardy, Olivier J.;
    • Suchard, Marc A.;
    • Guindon, Stéphane;
    • Lemey, Philippe
    Publication type:
    Article
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    Uncovering the endemic circulation of rabies in Cambodia.

    Published in:
    Molecular Ecology, 2023, v. 32, n. 18, p. 5140, doi. 10.1111/mec.17087
    By:
    • Layan, Maylis;
    • Dacheux, Laurent;
    • Lemey, Philippe;
    • Brunker, Kirstyn;
    • Ma, Laurence;
    • Troupin, Cécile;
    • Dussart, Philippe;
    • Chevalier, Véronique;
    • Wood, James L. N.;
    • Ly, Sowath;
    • Duong, Veasna;
    • Bourhy, Hervé;
    • Dellicour, Simon
    Publication type:
    Article
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    Transmission dynamics of re-emerging rabies in domestic dogs of rural China.

    Published in:
    PLoS Pathogens, 2018, v. 14, n. 12, p. 1, doi. 10.1371/journal.ppat.1007392
    By:
    • Tian, Huaiyu;
    • Yang, Qiqi;
    • Li, Yidan;
    • Feng, Yun;
    • Yang, Weihong;
    • Zhang, Yuzhen;
    • Zhang, Yunzhi;
    • Zhang, Hailin;
    • Vrancken, Bram;
    • Gill, Mandev S.;
    • Lemey, Philippe;
    • Dellicour, Simon;
    • Cazelles, Bernard;
    • Tan, Hua;
    • Pybus, Oliver G.;
    • Stenseth, Nils Chr.
    Publication type:
    Article
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    A Phylodynamic Workflow to Rapidly Gain Insights into the Dispersal History and Dynamics of SARS-CoV-2 Lineages.

    Published in:
    Molecular Biology & Evolution, 2021, v. 38, n. 4, p. 1608, doi. 10.1093/molbev/msaa284
    By:
    • Dellicour, Simon;
    • Durkin, Keith;
    • Hong, Samuel L;
    • Vanmechelen, Bert;
    • Martí-Carreras, Joan;
    • Gill, Mandev S;
    • Meex, Cécile;
    • Bontems, Sébastien;
    • André, Emmanuel;
    • Gilbert, Marius;
    • Walker, Conor;
    • Maio, Nicola De;
    • Faria, Nuno R;
    • Hadfield, James;
    • Hayette, Marie-Pierre;
    • Bours, Vincent;
    • Wawina-Bokalanga, Tony;
    • Artesi, Maria;
    • Baele, Guy;
    • Maes, Piet
    Publication type:
    Article
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    Genomic Epidemiology, Evolution, and Transmission Dynamics of Porcine Deltacoronavirus.

    Published in:
    Molecular Biology & Evolution, 2020, v. 37, n. 9, p. 2641, doi. 10.1093/molbev/msaa117
    By:
    • He, Wan-Ting;
    • Ji, Xiang;
    • He, Wei;
    • Dellicour, Simon;
    • Wang, Shilei;
    • Li, Gairu;
    • Zhang, Letian;
    • Gilbert, Marius;
    • Zhu, Henan;
    • Xing, Gang;
    • Veit, Michael;
    • Huang, Zhen;
    • Han, Guan-Zhu;
    • Huang, Yaowei;
    • Suchard, Marc A;
    • Baele, Guy;
    • Lemey, Philippe;
    • Su, Shuo
    Publication type:
    Article
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    Incorporating heterogeneous sampling probabilities in continuous phylogeographic inference — Application to H5N1 spread in the Mekong region.

    Published in:
    Bioinformatics, 2020, v. 36, n. 7, p. 2098, doi. 10.1093/bioinformatics/btz882
    By:
    • Dellicour, Simon;
    • Lemey, Philippe;
    • Artois, Jean;
    • Lam, Tommy T;
    • Fusaro, Alice;
    • Monne, Isabella;
    • Cattoli, Giovanni;
    • Kuznetsov, Dmitry;
    • Xenarios, Ioannis;
    • Dauphin, Gwenaelle;
    • Kalpravidh, Wantanee;
    • Dobschuetz, Sophie Von;
    • Claes, Filip;
    • Newman, Scott H;
    • Suchard, Marc A;
    • Baele, Guy;
    • Gilbert, Marius
    Publication type:
    Article
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    Contribution of climate change to the spatial expansion of West Nile virus in Europe.

    Published in:
    Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-45290-3
    By:
    • Erazo, Diana;
    • Grant, Luke;
    • Ghisbain, Guillaume;
    • Marini, Giovanni;
    • Colón-González, Felipe J.;
    • Wint, William;
    • Rizzoli, Annapaola;
    • Van Bortel, Wim;
    • Vogels, Chantal B. F.;
    • Grubaugh, Nathan D.;
    • Mengel, Matthias;
    • Frieler, Katja;
    • Thiery, Wim;
    • Dellicour, Simon
    Publication type:
    Article
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    Dispersion patterns of SARS-CoV-2 variants Gamma, Lambda and Mu in Latin America and the Caribbean.

    Published in:
    Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-46143-9
    By:
    • Gräf, Tiago;
    • Martinez, Alexander A.;
    • Bello, Gonzalo;
    • Dellicour, Simon;
    • Lemey, Philippe;
    • Colizza, Vittoria;
    • Mazzoli, Mattia;
    • Poletto, Chiara;
    • Cardoso, Vanessa Leiko Oikawa;
    • da Silva, Alexandre Freitas;
    • Baumeister, Elsa;
    • Campos, Josefina;
    • Pontoriero, Andrea;
    • Martin, Indira;
    • Ferguson, Kirvina;
    • Johnson, Draven;
    • Beckles, Songee;
    • Forde, Kasandra;
    • Sosa, Aldo;
    • Melendez, Roberto
    Publication type:
    Article
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    Application of Phylodynamic Tools to Inform the Public Health Response to COVID-19: Qualitative Analysis of Expert Opinions.

    Published in:
    JMIR Formative Research, 2023, v. 7, n. 1, p. 1, doi. 10.2196/39409
    By:
    • Rich, Shannan N;
    • Richards, Veronica;
    • Mavian, Carla;
    • Rife Magalis, Brittany;
    • Grubaugh, Nathan;
    • Rasmussen, Sonja A;
    • Dellicour, Simon;
    • Vrancken, Bram;
    • Carrington, Christine;
    • Fisk-Hoffman, Rebecca;
    • Danso-Odei, Demi;
    • Chacreton, Daniel;
    • Shapiro, Jerne;
    • Seraphin, Marie Nancy;
    • Hepp, Crystal;
    • Black, Allison;
    • Dennis, Ann;
    • Trovão, Nídia Sequeira;
    • Vandamme, Anne-Mieke;
    • Rasmussen, Angela
    Publication type:
    Article
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    Investigation of an international water polo tournament in Czechia as a potential source for early introduction of the SARS-CoV-2 Omicron variant into Belgium, Switzerland and Germany, November 2021.

    Published in:
    Eurosurveillance (15607917), 2023, v. 28, n. 45, p. 14, doi. 10.2807/1560-7917.ES.2023.28.45.2300018
    By:
    • Rudin, Christoph;
    • Bollen, Nena;
    • Hong, Samuel L.;
    • Wegner, Fanny;
    • Politi, Lida;
    • Mellou, Kassiani;
    • Geenen, Caspar;
    • Gorissen, Sarah;
    • Verhasselt, Bruno;
    • Durkin, Keith;
    • Henin, Coralie;
    • Logist, Anne-Sophie;
    • Dellicour, Simon;
    • Resa, Tobias;
    • Stadler, Tanja;
    • Maes, Piet;
    • Cuypers, Lize;
    • André, Emmanuel;
    • Egli, Adrian;
    • Baele, Guy
    Publication type:
    Article