Works matching AU De Masi, Federico

Results: 22

The dynamics of the gut microbiota in prediabetes during a four-year follow-up among European patients—an IMI-DIRECT prospective study.

Published in:

Genome Medicine, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s13073-025-01508-7

By:

Lyu, Liwei;
Fan, Yong;
Vogt, Josef Korbinian;
Clos-Garcia, Marc;
Bonnefond, Amelie;
Pedersen, Helle Krogh;
Dutta, Avirup;
Koivula, Robert;
Sharma, Sapna;
Allin, Kristine Højgaard;
Brorsson, Caroline;
Cederberg, Henna;
Chabanova, Elizaveta;
De Masi, Federico;
Dermitzakis, Emmanouil;
Elders, Petra J.;
Blom, Marieke T.;
Hollander, Monika;
Eriksen, Rebeca;
Forgie, Ian

Publication type:

Article

Bayesian network imputation methods applied to multi-omics data identify putative causal relationships in a type 2 diabetes dataset containing incomplete data: An IMI DIRECT Study.

Published in:

PLoS Genetics, 2025, v. 21, n. 7, p. 1, doi. 10.1371/journal.pgen.1011776

By:

Howey, Richard;
Adam, Jonathan;
Adamski, Jerzy;
Atabaki, Natalie N.;
Brunak, Søren;
Chmura, Piotr Jaroslaw;
De Masi, Federico;
Dermitzakis, Emmanouil T.;
Fernandez-Tajes, Juan J.;
Forgie, Ian M.;
Franks, Paul W.;
Giordano, Giuseppe N.;
Haid, Mark;
Hansen, Torben;
Hansen, Tue H.;
Harms, Peter P.;
Hattersley, Andrew T.;
Hong, Mun-gwan;
Jacobsen, Ulrik Plesner;
Jones, Angus G.

Publication type:

Article

Systematic Discovery of New Recognition Peptides Mediating Protein Interaction Networks.

Published in:

PLoS Biology, 2005, v. 3, n. 12, p. e405, doi. 10.1371/journal.pbio.0030405

By:

Neduva, Victor;
Linding, Rune;
Su-Angrand, Isabelle;
Stark, Alexander;
Masi, Federico de;
Gibson, Toby J.;
Lewis, Joe;
Serrano, Luis;
Russell, Robert B.

Publication type:

Article

Systematic Discovery of New Recognition Peptides Mediating Protein Interaction Networks.

Published in:

PLoS Biology, 2005, v. 3, n. 11, p. 1, doi. 10.1371/journal.pbio.0030405

By:

Neduva, Victor;
Linding, Rune;
Su-Angrand, Isabelle;
Stark, Alexander;
Masi, Federico de;
Gibson, Toby J;
Lewis, Joe;
Serrano, Luis;
Russell, Robert B

Publication type:

Article

High throughput production of mouse monoclonal antibodies using antigen microarrays.

Published in:

Proteomics, 2005, v. 5, n. 16, p. 4070, doi. 10.1002/pmic.200401279

By:

Federico De Masi;
Pieranna Chiarella;
Heike Wilhelm;
Marzia Massimi;
Belinda Bullard;
Wilhelm Ansorge;
Alan Sawyer

Publication type:

Article

Using a structural and logics systems approach to infer bHLH–DNA binding specificity determinants.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 11, p. 4553, doi. 10.1093/nar/gkr070

By:

De Masi, Federico;
Grove, Christian A.;
Vedenko, Anastasia;
Alibés, Andreu;
Gisselbrecht, Stephen S.;
Serrano, Luis;
Bulyk, Martha L.;
Walhout, Albertha J. M.

Publication type:

Article

Using protein design algorithms to understand the molecular basis of disease caused by protein–DNA interactions: the Pax6 example.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7422, doi. 10.1093/nar/gkq683

By:

Alibés, Andreu;
Nadra, Alejandro D.;
De Masi, Federico;
Bulyk, Martha L.;
Serrano, Luis;
Stricher, François

Publication type:

Article

Genetic analysis of blood molecular phenotypes reveals common properties in the regulatory networks affecting complex traits.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40569-3

By:

Brown, Andrew A.;
Fernandez-Tajes, Juan J.;
Hong, Mun-gwan;
Brorsson, Caroline A.;
Koivula, Robert W.;
Davtian, David;
Dupuis, Théo;
Sartori, Ambra;
Michalettou, Theodora-Dafni;
Forgie, Ian M.;
Adam, Jonathan;
Allin, Kristine H.;
Caiazzo, Robert;
Cederberg, Henna;
De Masi, Federico;
Elders, Petra J. M.;
Giordano, Giuseppe N.;
Haid, Mark;
Hansen, Torben;
Hansen, Tue H.

Publication type:

Article

Correction to: The role of physical activity in metabolic homeostasis before and after the onset of type 2 diabetes: an IMI DIRECT study.

Published in:

2021

By:

Koivula, Robert W.;
Atabaki-Pasdar, Naeimeh;
Giordano, Giuseppe N.;
White, Tom;
Adamski, Jerzy;
Bell, Jimmy D.;
Beulens, Joline;
Brage, Søren;
Brunak, Søren;
De Masi, Federico;
Dermitzakis, Emmanouil T.;
Forgie, Ian M.;
Frost, Gary;
Hansen, Torben;
Hansen, Tue H.;
Hattersley, Andrew;
Kokkola, Tarja;
Kurbasic, Azra;
Laakso, Markku;
Mari, Andrea

Publication type:

Correction Notice

The role of physical activity in metabolic homeostasis before and after the onset of type 2 diabetes: an IMI DIRECT study.

Published in:

Diabetologia, 2020, v. 63, n. 4, p. 744, doi. 10.1007/s00125-019-05083-6

By:

Koivula, Robert W.;
Atabaki-Pasdar, Naeimeh;
Giordano, Giuseppe N.;
White, Tom;
Adamski, Jerzy;
Bell, Jimmy D.;
Beulens, Joline;
Brage, Søren;
Brunak, Søren;
De Masi, Federico;
Dermitzakis, Emmanouil T.;
Forgie, Ian M.;
Frost, Gary;
Hansen, Torben;
Hansen, Tue H.;
Hattersley, Andrew;
Kokkola, Tarja;
Kurbasic, Azra;
Laakso, Markku;
Mari, Andrea

Publication type:

Article

Discovery of biomarkers for glycaemic deterioration before and after the onset of type 2 diabetes: descriptive characteristics of the epidemiological studies within the IMI DIRECT Consortium.

Published in:

Diabetologia, 2019, v. 62, n. 9, p. 1601, doi. 10.1007/s00125-019-4906-1

By:

Koivula, Robert W.;
Forgie, Ian M.;
Kurbasic, Azra;
Viñuela, Ana;
Heggie, Alison;
Giordano, Giuseppe N.;
Hansen, Tue H.;
Hudson, Michelle;
Koopman, Anitra D. M.;
Rutters, Femke;
Siloaho, Maritta;
Allin, Kristine H.;
Brage, Søren;
Brorsson, Caroline A.;
Dawed, Adem Y.;
De Masi, Federico;
Groves, Christopher J.;
Kokkola, Tarja;
Mahajan, Anubha;
Perry, Mandy H.

Publication type:

Article

Whole blood co-expression modules associate with metabolic traits and type 2 diabetes: an IMI-DIRECT study.

Published in:

Genome Medicine, 2020, v. 12, n. 1, p. 1, doi. 10.1186/s13073-020-00806-6

By:

Gudmundsdottir, Valborg;
Pedersen, Helle Krogh;
Mazzoni, Gianluca;
Allin, Kristine H.;
Artati, Anna;
Beulens, Joline W.;
Banasik, Karina;
Brorsson, Caroline;
Cederberg, Henna;
Chabanova, Elizaveta;
De Masi, Federico;
Elders, Petra J.;
Forgie, Ian;
Giordano, Giuseppe N.;
Grallert, Harald;
Gupta, Ramneek;
Haid, Mark;
Hansen, Torben;
Hansen, Tue H.;
Hattersley, Andrew T.

Publication type:

Article

Control of lysosomal biogenesis and Notch-dependent tissue patterning by components of the TFEB-V-ATPase axis in Drosophila melanogaster.

Published in:

Autophagy, 2016, v. 12, n. 3, p. 499, doi. 10.1080/15548627.2015.1134080

By:

Tognon, Emiliana;
Kobia, Francis;
Busi, Ilaria;
Fumagalli, Arianna;
De Masi, Federico;
Vaccari, Thomas

Publication type:

Article

ATAF1 transcription factor directly regulates abscisic acid biosynthetic gene NCED3 in Arabidopsis thaliana.

Published in:

FEBS Open Bio, 2013, v. 3, p. 321, doi. 10.1016/j.fob.2013.07.006

By:

Jensen, Michael Krogh;
Lindemose, Søren;
Masi, Federico de;
Reimer, Julia J.;
Nielsen, Michael;
Perera, Venura;
Workman, Chris T.;
Turck, Franziska;
Grant, Murray R.;
Mundy, John;
Petersen, Morten;
Skriver, Karen

Publication type:

Article

ATAF1 transcription factor directly regulates abscisic acid biosynthetic gene NCED3 in Arabidopsis thaliana.

Published in:

FEBS Open Bio, 2013, v. 3, n. 1, p. 321, doi. 10.1016/j.fob.2013.07.006

By:

Jensen, Michael Krogh;
Lindemose, Søren;
de Masi, Federico;
Reimer, Julia J.;
Nielsen, Michael;
Perera, Venura;
Workman, Chris T.;
Turck, Franziska;
Grant, Murray R.;
Mundy, John;
Petersen, Morten;
Skriver, Karen

Publication type:

Article

A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 12, p. 7681, doi. 10.1093/nar/gku502

By:

Lindemose, Søren;
Jensen, Michael K.;
de Velde, Jan Van;
O'Shea, Charlotte;
Heyndrickx, Ken S.;
Workman, Christopher T.;
Vandepoele, Klaas;
Skriver, Karen;
Masi, Federico De

Publication type:

Article

Cross-recognition of a pit viper (Crotalinae) polyspecific antivenom explored through high-density peptide microarray epitope mapping.

Published in:

PLoS Neglected Tropical Diseases, 2017, v. 11, n. 7, p. 1, doi. 10.1371/journal.pntd.0005768

By:

Engmark, Mikael;
Lomonte, Bruno;
Gutiérrez, José María;
Laustsen, Andreas H.;
De Masi, Federico;
Andersen, Mikael R.;
Lund, Ole

Publication type:

Article

Profiles of Glucose Metabolism in Different Prediabetes Phenotypes, Classified by Fasting Glycemia, 2-Hour OGTT, Glycated Hemoglobin, and 1-Hour OGTT: An IMI DIRECT Study.

Published in:

2021

By:

Tura, Andrea;
Grespan, Eleonora;
Göbl, Christian S.;
Koivula, Robert W.;
Franks, Paul W.;
Pearson, Ewan R.;
Walker, Mark;
Forgie, Ian M.;
Giordano, Giuseppe N.;
Pavo, Imre;
Ruetten, Hartmut;
Dermitzakis, Emmanouil T.;
McCarthy, Mark I.;
Pedersen, Oluf;
Schwenk, Jochen M.;
Adamski, Jerzy;
De Masi, Federico;
Tsirigos, Konstantinos D.;
Brunak, Søren;
Viñuela, Ana

Publication type:

journal article

High-throughput immuno-profiling of mamba (Dendroaspis) venom toxin epitopes using high-density peptide microarrays.

Published in:

Scientific Reports, 2016, p. 36629, doi. 10.1038/srep36629

By:

Engmark, Mikael;
Andersen, Mikael R.;
Laustsen, Andreas H.;
Patel, Jigar;
Sullivan, Eric;
de Masi, Federico;
Hansen, Christian S.;
Kringelum, Jens V.;
Lomonte, Bruno;
Gutiérrez, José María;
Lund, Ole

Publication type:

Article

High-throughput sequencing enhanced phage display enables the identification of patient-specific epitope motifs in serum.

Published in:

Scientific Reports, 2015, p. 12913, doi. 10.1038/srep12913

By:

Christiansen, Anders;
Kringelum, Jens V.;
Hansen, Christian S.;
Bøgh, Katrine L.;
Sullivan, Eric;
Patel, Jigar;
Rigby, Neil M.;
Eiwegger, Thomas;
Szépfalusi, Zsolt;
Masi, Federico de;
Nielsen, Morten;
Lund, Ole;
Dufva, Martin

Publication type:

Article

The Association of Cardiometabolic, Diet and Lifestyle Parameters With Plasma Glucagon-like Peptide-1: An IMI DIRECT Study.

Published in:

Journal of Clinical Endocrinology & Metabolism, 2024, v. 109, n. 9, p. e1697, doi. 10.1210/clinem/dgae119

By:

Eriksen, Rebeca;
White, Margaret C;
Dawed, Adem Y;
Perez, Isabel Garcia;
Posma, Joram M;
Haid, Mark;
Sharma, Sapna;
Prehn, Cornelia;
Thomas, E Louise;
Koivula, Robert W;
Bizzotto, Roberto;
Mari, Andrea;
Giordano, Giuseppe N;
Pavo, Imre;
Schwenk, Jochen M;
Masi, Federico De;
Tsirigos, Konstantinos D;
Brunak, Søren;
Viñuela, Ana;
Mahajan, Anubha

Publication type:

Article

Genome-Wide Association Analysis of Pancreatic Beta-Cell Glucose Sensitivity.

Published in:

2021

By:

Deshmukh, Harshal A;
Madsen, Anne Lundager;
Viñuela, Ana;
Have, Christian Theil;
Grarup, Niels;
Tura, Andrea;
Mahajan, Anubha;
Heggie, Alison J;
Koivula, Robert W;
De Masi, Federico;
Tsirigos, Konstantinos K;
Linneberg, Allan;
Drivsholm, Thomas;
Pedersen, Oluf;
Sørensen, Thorkild I A;
Astrup, Arne;
Gjesing, Anette A P;
Pavo, Imre;
Wood, Andrew R;
Ruetten, Hartmut

Publication type:

journal article