Works by David, Sophia

Results: 15

Novel Subclone of Carbapenem-Resistant Klebsiella pneumoniae Sequence Type 11 with Enhanced Virulence and Transmissibility, China.
Published in:
2020
By:
- Kai Zhou;
- Tingting Xiao;
- David, Sophia;
- Qin Wang;
- Yanzi Zhou;
- Lihua Guo;
- Aanensen, David;
- Holt, Kathryn E.;
- Thomson, Nicholas R.;
- Grundmann, Hajo;
- Ping Shen;
- Yonghong Xiao;
- Zhou, Kai;
- Xiao, Tingting;
- Wang, Qin;
- Zhou, Yanzi;
- Guo, Lihua;
- Shen, Ping;
- Xiao, Yonghong
Publication type:
journal article
Cryo-EM structure and evolutionary history of the conjugation surface exclusion protein TraT.
Published in:
Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-55834-w
By:
- Seddon, Chloe;
- David, Sophia;
- Wong, Joshua L. C.;
- Ishimoto, Naito;
- He, Shan;
- Bradshaw, Jonathan;
- Low, Wen Wen;
- Frankel, Gad;
- Beis, Konstantinos
Publication type:
Article
Emergence and persistent spread of carbapenemaseproducing Klebsiella pneumoniae high-risk clones in Greek hospitals, 2013 to 2022.
Published in:
Eurosurveillance (15607917), 2023, v. 28, n. 47, p. 1, doi. 10.2807/1560-7917.ES.2023.28.47.2300571
By:
- Tryfinopoulou, Kyriaki;
- Linkevicius, Marius;
- Pappa, Olga;
- Alm, Erik;
- Karadimas, Kleon;
- Svartström, Olov;
- Polemis, Michalis;
- Mellou, Kassiani;
- Maragkos, Antonis;
- Brolund, Alma;
- Fröding, Inga;
- David, Sophia;
- Vatopoulos, Alkiviadis;
- Palm, Daniel;
- Monnet, Dominique L.;
- Zaoutis, Theoklis;
- Kohlenberg, Anke
Publication type:
Article
It's diversity all the way down.
Published in:
Nature Reviews Microbiology, 2015, v. 13, n. 12, p. 740, doi. 10.1038/nrmicro3587
By:
- David, Sophia;
- Hadfield, James
Publication type:
Article
Whole genome resequencing of the human parasite Schistosoma mansoni reveals population history and effects of selection.
Published in:
Scientific Reports, 2016, p. 20954, doi. 10.1038/srep20954
By:
- Crellen, Thomas;
- Allan, Fiona;
- David, Sophia;
- Durrant, Caroline;
- Huckvale, Thomas;
- Holroyd, Nancy;
- Emery, Aidan M.;
- Rollinson, David;
- Aanensen, David M.;
- Berriman, Matthew;
- Webster, Joanne P.;
- Cotton, James A.
Publication type:
Article
Correction: Dynamics and impact of homologous recombination on the evolution of Legionella pneumophila.
Published in:
2017
By:
- David, Sophia;
- Sánchez-Busó, Leonor;
- Harris, Simon R.;
- Marttinen, Pekka;
- Rusniok, Christophe;
- Buchrieser, Carmen;
- Harrison, Timothy G.;
- Parkhill, Julian
Publication type:
Correction Notice
Dynamics and impact of homologous recombination on the evolution of Legionella pneumophila.
Published in:
PLoS Genetics, 2017, v. 13, n. 6, p. 1, doi. 10.1371/journal.pgen.1006855
By:
- David, Sophia;
- Sánchez-Busó, Leonor;
- Harris, Simon R.;
- Marttinen, Pekka;
- Rusniok, Christophe;
- Buchrieser, Carmen;
- Harrison, Timothy G.;
- Parkhill, Julian
Publication type:
Article
The changing epidemiology of carbapenemase-producing Klebsiella pneumoniae in Italy: toward polyclonal evolution with emergence of high-risk lineages.
Published in:
2021
By:
- Pilato, Vincenzo Di;
- Errico, Giulia;
- Monaco, Monica;
- Giani, Tommaso;
- Grosso, Maria Del;
- Antonelli, Alberto;
- David, Sophia;
- Lindh, Erika;
- Camilli, Romina;
- Aanensen, David M;
- Rossolini, Gian Maria;
- Pantosti, Annalisa;
- pneumoniae, the AR-ISS Laboratory Study Group on carbapenemase-producing Klebsiella;
- Di Pilato, Vincenzo;
- Del Grosso, Maria;
- AR-ISS Laboratory Study Group on carbapenemase-producing Klebsiella pneumoniae
Publication type:
journal article
Widespread emergence of OmpK36 loop 3 insertions among multidrug-resistant clones of Klebsiella pneumoniae.
Published in:
PLoS Pathogens, 2022, v. 18, n. 7, p. 1, doi. 10.1371/journal.ppat.1010334
By:
- David, Sophia;
- Wong, Joshua L. C.;
- Sanchez-Garrido, Julia;
- Kwong, Hok-Sau;
- Low, Wen Wen;
- Morecchiato, Fabio;
- Giani, Tommaso;
- Rossolini, Gian Maria;
- Brett, Stephen J.;
- Clements, Abigail;
- Beis, Konstantinos;
- Aanensen, David M.;
- Frankel, Gad
Publication type:
Article
Plasmids pick a bacterial partner before committing to conjugation.
Published in:
Nucleic Acids Research, 2023, v. 51, n. 17, p. 8925, doi. 10.1093/nar/gkad678
By:
- Frankel, Gad;
- David, Sophia;
- Low, Wen Wen;
- Seddon, Chloe;
- Wong, Joshua L C;
- Beis, Konstantinos
Publication type:
Article
Population genomics and antimicrobial resistance dynamics of Escherichia coli in wastewater and river environments.
Published in:
Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-01949-x
By:
- Delgado-Blas, Jose F.;
- Ovejero, Cristina M.;
- David, Sophia;
- Montero, Natalia;
- Calero-Caceres, William;
- Garcillan-Barcia, M. Pilar;
- de la Cruz, Fernando;
- Muniesa, Maite;
- Aanensen, David M.;
- Gonzalez-Zorn, Bruno
Publication type:
Article
Uno spaccato genomico su larga scala delle specie di Klebsiella isolate nel nord Italia rivela una trasmissione limitata tra contesti clinici e non-clinici.
Published in:
Summa, Animali da Reddito, 2024, v. 19, n. 6, p. 55, doi. 10.1038/s41564-022-01263-0
By:
- Thorpe, Harry A.;
- Booton, Ross;
- Kallonen, Teemu;
- Gibbon, Marjorie J.;
- Cout, Natacha;
- Passet, Virginie;
- López-Fernández, Sebastián;
- Rodrigues, Carla;
- Matthews, Louise;
- Mitchell, Sonia;
- Reeve, Richard;
- David, Sophia;
- Merla, Cristina;
- Corbella, Marta;
- Ferrari, Carolina;
- Comandatore, Francesco;
- Marone, Piero;
- Brisse, Sylvain;
- Sassera, Davide;
- Corander, Jukka
Publication type:
Article
Rapid Genomic Characterization and Global Surveillance of Klebsiella Using Pathogenwatch.
Published in:
Clinical Infectious Diseases, 2021, v. 73, p. S325, doi. 10.1093/cid/ciab784
By:
- Argimón, Silvia;
- David, Sophia;
- Underwood, Anthony;
- Abrudan, Monica;
- Wheeler, Nicole E;
- Kekre, Mihir;
- Abudahab, Khalil;
- Yeats, Corin A;
- Goater, Richard;
- Taylor, Ben;
- Harste, Harry;
- Muddyman, Dawn;
- Feil, Edward J;
- Brisse, Sylvain;
- Holt, Kathryn;
- Donado-Godoy, Pilar;
- Ravikumar, K L;
- Okeke, Iruka N;
- Carlos, Celia;
- Aanensen, David M
Publication type:
Article
Clones and Clusters of Antimicrobial-Resistant Klebsiella From Southwestern Nigeria.
Published in:
Clinical Infectious Diseases, 2021, v. 73, p. S308, doi. 10.1093/cid/ciab769
By:
- Afolayan, Ayorinde O;
- Oaikhena, Anderson O;
- Aboderin, Aaron O;
- Olabisi, Olatunde F;
- Amupitan, Adewale A;
- Abiri, Oyekola V;
- Ogunleye, Veronica O;
- Odih, Erkison Ewomazino;
- Adeyemo, Abolaji T;
- Adeyemo, Adeyemi T;
- Obadare, Temitope O;
- Abrudan, Monica;
- Argimón, Silvia;
- David, Sophia;
- Kekre, Mihir;
- Underwood, Anthony;
- Egwuenu, Abiodun;
- Ihekweazu, Chikwe;
- Aanensen, David M;
- Okeke, Iruka N
Publication type:
Article
Seeding and Establishment of Legionella pneumophila in Hospitals: Implications for Genomic Investigations of Nosocomial Legionnaires' Disease.
Published in:
Clinical Infectious Diseases, 2017, v. 64, n. 9, p. 1251, doi. 10.1093/cid/cix153
By:
- David, Sophia;
- Afshar, Baharak;
- Mentasti, Massimo;
- Ginevra, Christophe;
- Podglajen, Isabelle;
- Harris, Simon R.;
- Chalker, Victoria J.;
- Jarraud, Sophie;
- Harrison, Timothy G.;
- Parkhill, Julian
Publication type:
Article