Works by Daley, Mark

Results: 50

Halting the hallmarks: a cellular automaton model of early cancer growth inhibition.

Published in:

Natural Computing, 2016, v. 15, n. 1, p. 15, doi. 10.1007/s11047-015-9508-3

By:

Butler, Jenna;
Daley, Mark;
Mackay, Frances;
Denniston, Colin

Publication type:

Article

Theoretical and computational properties of transpositions.

Published in:

Natural Computing, 2011, v. 10, n. 2, p. 795, doi. 10.1007/s11047-010-9207-z

By:

Daley, Mark;
McQuillan, Ian;
McQuillan, James M.;
Mahalingam, Kalpana

Publication type:

Article

A relation by palindromic subwords.

Published in:

Natural Computing, 2010, v. 9, n. 4, p. 935, doi. 10.1007/s11047-010-9179-z

By:

Daley, Mark;
Mahalingam, Kalpana

Publication type:

Article

Modelling programmed frameshifting with frameshift machines.

Published in:

Natural Computing, 2010, v. 9, n. 1, p. 239, doi. 10.1007/s11047-009-9144-x

By:

Daley, Mark;
McQuillan, Ian

Publication type:

Article

Organ and cell-specific biomarkers of Long-COVID identified with targeted proteomics and machine learning.

Published in:

Molecular Medicine, 2023, v. 29, n. 1, p. 1, doi. 10.1186/s10020-023-00610-z

By:

Patel, Maitray A.;
Knauer, Michael J.;
Nicholson, Michael;
Daley, Mark;
Van Nynatten, Logan R.;
Cepinskas, Gediminas;
Fraser, Douglas D.

Publication type:

Article

Elevated vascular transformation blood biomarkers in Long-COVID indicate angiogenesis as a key pathophysiological mechanism.

Published in:

Molecular Medicine, 2022, v. 28, n. 1, p. 1, doi. 10.1186/s10020-022-00548-8

By:

Patel, Maitray A.;
Knauer, Michael J.;
Nicholson, Michael;
Daley, Mark;
Van Nynatten, Logan R.;
Martin, Claudio;
Patterson, Eric K.;
Cepinskas, Gediminas;
Seney, Shannon L.;
Dobretzberger, Verena;
Miholits, Markus;
Webb, Brian;
Fraser, Douglas D.

Publication type:

Article

Structure and function of gene regulatory networks associated with worker sterility in honeybees.

Published in:

Ecology & Evolution (20457758), 2016, v. 6, n. 6, p. 1692, doi. 10.1002/ece3.1997

By:

Sobotka, Julia A.;
Daley, Mark;
Chandrasekaran, Sriram;
Rubin, Benjamin D.;
Thompson, Graham J.

Publication type:

Article

Constructures: supporting human ingenuity in software.

Published in:

Digital Creativity, 2009, v. 20, n. 1/2, p. 79, doi. 10.1080/14626260902868079

By:

Smith, Jeff;
Mould, David;
Daley, Mark

Publication type:

Article

A Distinct Metabolite Signature in Military Personnel Exposed to Repetitive Low-Level Blasts.

Published in:

Frontiers in Neurology, 2022, v. 13, p. 1, doi. 10.3389/fneur.2022.831792

By:

Miller, Michael R.;
DiBattista, Alicia;
Patel, Maitray A.;
Daley, Mark;
Tenn, Catherine;
Nakashima, Ann;
Rhind, Shawn G.;
Vartanian, Oshin;
Shiu, Maria Y.;
Caddy, Norleen;
Garrett, Michelle;
Saunders, Doug;
Smith, Ingrid;
Jetly, Rakesh;
Fraser, Douglas D.

Publication type:

Article

Putative Concussion Biomarkers Identified in Adolescent Male Athletes Using Targeted Plasma Proteomics.

Published in:

Frontiers in Neurology, 2021, v. 12, p. 1, doi. 10.3389/fneur.2021.787480

By:

Miller, Michael R.;
Robinson, Michael;
Fischer, Lisa;
DiBattista, Alicia;
Patel, Maitray A.;
Daley, Mark;
Bartha, Robert;
Dekaban, Gregory A.;
Menon, Ravi S.;
Shoemaker, J. Kevin;
Diamandis, Eleftherios P.;
Prassas, Ioannis;
Fraser, Douglas D.

Publication type:

Article

ORTHOGONAL SHUFFLE ON TRAJECTORIES.

Published in:

International Journal of Foundations of Computer Science, 2011, v. 22, n. 1, p. 213, doi. 10.1142/S0129054111007964

By:

DALEY, MARK;
KARI, LILA;
SEKI, SHINNOSUKE;
SOSÌK, PETR;
Gheorghe, Marian

Publication type:

Article

COMPUTATION BY ANNOTATION:: MODELLING EPIGENETIC REGULATION.

Published in:

International Journal of Foundations of Computer Science, 2008, v. 19, n. 5, p. 1087, doi. 10.1142/S0129054108006157

By:

BIEGLER, FRANZISKA;
DALEY, MARK;
LOCKE, M. ELIZABETH O.

Publication type:

Article

INTRA-MOLECULAR TEMPLATE-GUIDED RECOMBINATION.

Published in:

International Journal of Foundations of Computer Science, 2007, v. 18, n. 6, p. 1177, doi. 10.1142/S0129054107005224

By:

DALEY, MARK;
DOMARATZKI, MICHAEL;
MORRIS, ALEXIS;
Stiebe, R.

Publication type:

Article

FORMAL MODELLING OF VIRAL GENE COMPRESSION.

Published in:

International Journal of Foundations of Computer Science, 2005, v. 16, n. 3, p. 453, doi. 10.1142/S0129054105003091

By:

Daley, Mark;
Mcquillan, Ian

Publication type:

Article

Action potential metrics and automated data analysis pipeline for cardiotoxicity testing using optically mapped hiPSC-derived 3D cardiac microtissues.

Published in:

PLoS ONE, 2023, v. 18, n. 2, p. 1, doi. 10.1371/journal.pone.0280406

By:

Soepriatna, Arvin H.;
Navarrete-Welton, Allison;
Kim, Tae Yun;
Daley, Mark C.;
Bronk, Peter;
Kofron, Celinda M.;
Mende, Ulrike;
Coulombe, Kareen L. K.;
Choi, Bum-Rak

Publication type:

Article

The Sticky Riff: Quantifying the Melodic Identities of Medieval Modes.

Published in:

Empirical Musicology Review, 2021, v. 16, n. 2, p. 312, doi. 10.18061/emr.v16i2.7357

By:

HELSEN, KATE;
DALEY, MARK;
SCHINDLER, JAKE

Publication type:

Article

"AI's gonna have an impact on everything in society, so it has to have an impact on public health": a fundamental qualitative descriptive study of the implications of artificial intelligence for public health.

Published in:

2021

By:

Morgenstern, Jason D.;
Rosella, Laura C.;
Daley, Mark J.;
Goel, Vivek;
Schünemann, Holger J.;
Piggott, Thomas

Publication type:

journal article

The Use of Cremation Data for Timely Mortality Surveillance During the COVID-19 Pandemic in Ontario, Canada: Validation Study.

Published in:

JMIR Public Health & Surveillance, 2022, v. 8, n. 2, p. 1, doi. 10.2196/32426

By:

Postill, Gemma;
Murray, BMScH; Regan;
Wilton, Andrew S.;
Wells, Richard A.;
Sirbu, Renee;
Daley, Mark J.;
Rosella, Laura

Publication type:

Article

Novel severe traumatic brain injury blood outcome biomarkers identified with proximity extension assay.

Published in:

Clinical Chemistry & Laboratory Medicine, 2021, v. 59, n. 10, p. 1662, doi. 10.1515/cclm-2021-0103

By:

Fraser, Douglas D.;
Chen, Michelle;
Ren, Annie;
Miller, Michael R.;
Martin, Claudio;
Daley, Mark;
Diamandis, Eleftherios P.;
Prassas, Ioannis

Publication type:

Article

Critically Ill COVID-19 Patients Exhibit Anti-SARS-CoV-2 Serological Responses.

Published in:

Pathophysiology, 2021, v. 28, n. 2, p. 212, doi. 10.3390/pathophysiology28020014

By:

Fraser, Douglas D.;
Cepinskas, Gediminas;
Slessarev, Marat;
Martin, Claudio M.;
Daley, Mark;
Patel, Maitray A.;
Miller, Michael R.;
Patterson, Eric K.;
O'Gorman, David B.;
Gill, Sean E.;
Higgins, Ian;
John, Julius P. P.;
Melo, Christopher;
Nini, Lylia;
Wang, Xiaoqin;
Zeidler, Johannes;
Cruz-Aguado, Jorge A.

Publication type:

Article

Pediatric sepsis inflammatory blood biomarkers that correlate with clinical variables and severity of illness scores.

Published in:

Journal of Inflammation, 2024, v. 21, n. 1, p. 1, doi. 10.1186/s12950-024-00379-w

By:

Leonard, Sean;
Guertin, Hailey;
Odoardi, Natalya;
Miller, Michael R.;
Patel, Maitray A.;
Daley, Mark;
Cepinskas, Gediminas;
Fraser, Douglas D.

Publication type:

Article

One Billion hiPSC-Cardiomyocytes: Upscaling Engineered Cardiac Tissues to Create High Cell Density Therapies for Clinical Translation in Heart Regeneration.

Published in:

Bioengineering (Basel), 2023, v. 10, n. 5, p. 587, doi. 10.3390/bioengineering10050587

By:

Dwyer, Kiera D.;
Kant, Rajeev J.;
Soepriatna, Arvin H.;
Roser, Stephanie M.;
Daley, Mark C.;
Sabe, Sharif A.;
Xu, Cynthia M.;
Choi, Bum-Rak;
Sellke, Frank W.;
Coulombe, Kareen L. K.

Publication type:

Article

Characterization of cardiac fibroblast-extracellular matrix crosstalk across developmental ages provides insight into age-related changes in cardiac repair.

Published in:

Frontiers in Cell & Developmental Biology, 2024, p. 01, doi. 10.3389/fcell.2024.1279932

By:

Perreault, Luke R.;
Daley, Mark C.;
Watson, Matthew C.;
Rastogi, Sagar;
Jaiganesh, Ajith;
Porter, Elizabeth C.;
Duffy, Breanna M.;
Black III, Lauren D.

Publication type:

Article

Response to Casaer and Van den Berghe.

Published in:

2016

By:

Ferrie, Suzie;
Allman-Farinelli, Margaret;
Daley, Mark;
Smith, Kristine

Publication type:

Letter

Protein Requirements in the Critically Ill: A Randomized Controlled Trial Using Parenteral Nutrition.

Published in:

2016

By:

Ferrie, Suzie;
Allman-Farinelli, Margaret;
Daley, Mark;
Smith, Kristine

Publication type:

journal article

A reduced proteomic signature in critically ill Covid-19 patients determined with plasma antibody micro-array and machine learning.

Published in:

Clinical Proteomics, 2024, v. 21, n. 1, p. 1, doi. 10.1186/s12014-024-09488-3

By:

Patel, Maitray A.;
Daley, Mark;
Van Nynatten, Logan R.;
Slessarev, Marat;
Cepinskas, Gediminas;
Fraser, Douglas D.

Publication type:

Article

Novel plasma protein biomarkers from critically ill sepsis patients.

Published in:

Clinical Proteomics, 2022, v. 19, n. 1, p. 1, doi. 10.1186/s12014-022-09389-3

By:

Van Nynatten, Logan R.;
Slessarev, Marat;
Martin, Claudio M.;
Leligdowicz, Aleks;
Miller, Michael R.;
Patel, Maitray A.;
Daley, Mark;
Patterson, Eric K.;
Cepinskas, Gediminas;
Fraser, Douglas D.

Publication type:

Article

HD-CNV: hotspot detector for copy number variants.

Published in:

Bioinformatics, 2013, v. 29, n. 2, p. 262, doi. 10.1093/bioinformatics/bts650

By:

Butler, Jenna L.;
Osborne Locke, Marjorie Elizabeth;
Hill, Kathleen A.;
Daley, Mark

Publication type:

Article

Classification of lidar measurements using supervised and unsupervised machine learning methods.

Published in:

Atmospheric Measurement Techniques, 2021, v. 14, n. 1, p. 391, doi. 10.5194/amt-14-391-2021

By:

Farhani, Ghazal;
Sica, Robert J.;
Daley, Mark Joseph

Publication type:

Article

Current applications and outcomes of AI-driven adaptive learning systems in physical rehabilitation science education: A scoping review protocol.

Published in:

PLoS ONE, 2025, v. 20, n. 6, p. 1, doi. 10.1371/journal.pone.0325649

By:

Komolafe, Oyindolapo O.;
Mustofa, Jannatul;
Daley, Mark J.;
Walton, David;
Tawiah, Andrews

Publication type:

Article

Gene co-citation networks associated with worker sterility in honey bees.

Published in:

BMC Systems Biology, 2014, v. 8, n. 1, p. 1, doi. 10.1186/1752-0509-8-38

By:

Mullen, Emma Kate;
Daley, Mark;
Backx, Alanna Gabrielle;
Thompson, Graham James

Publication type:

Article

Useful Templates and Iterated Template-Guided DNA Recombination in Ciliates.

Published in:

Theory of Computing Systems, 2006, v. 39, n. 5, p. 619, doi. 10.1007/s00224-005-1206-6

By:

Daley, Mark;
McQuillan, Ian

Publication type:

Article

Genomic copy number variation in Mus musculus.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1713-z

By:

Locke, M. Elizabeth O.;
Milojevic, Maja;
Eitutis, Susan T.;
Patel, Nisha;
Wishart, Andrea E.;
Daley, Mark;
Hill, Kathleen A.

Publication type:

Article

Genomic copy number variation in Mus musculus.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 497, doi. 10.1186/s12864-015-1713-z

By:

Locke, Elizabeth O;
Milojevic, Maja;
Eitutis, Susan T;
Patel, Nisha;
Wishart, Andrea E;
Daley, Mark;
Hill, Kathleen A

Publication type:

Article

Differential expression of plasma proteins and pathway enrichments in pediatric diabetic ketoacidosis.

Published in:

Molecular Medicine, 2025, v. 31, n. 1, p. 1, doi. 10.1186/s10020-024-01056-7

By:

Spagnolo, Paolo;
Cela, Enis;
Patel, Maitray A.;
Tweddell, David;
Daley, Mark;
Clarson, Cheril;
Stranges, Saverio;
Cepinskas, Gediminas;
Fraser, Douglas D.

Publication type:

Article

Metabolomic signature of pediatric diabetic ketoacidosis: key metabolites, pathways, and panels linked to clinical variables.

Published in:

Molecular Medicine, 2024, v. 30, n. 1, p. 1, doi. 10.1186/s10020-024-01046-9

By:

Spagnolo, Paolo;
Tweddell, David;
Cela, Enis;
Daley, Mark;
Clarson, Cheril;
Rupar, C. Anthony;
Stranges, Saverio;
Bravo, Michael;
Cepinskas, Gediminas;
Fraser, Douglas D.

Publication type:

Article

The plasma proteome differentiates the multisystem inflammatory syndrome in children (MIS-C) from children with SARS-CoV-2 negative sepsis.

Published in:

Molecular Medicine, 2024, v. 30, n. 1, p. 1, doi. 10.1186/s10020-024-00806-x

By:

Patel, Maitray A.;
Fraser, Douglas D.;
Daley, Mark;
Cepinskas, Gediminas;
Veraldi, Noemi;
Grazioli, Serge

Publication type:

Article

Human Atrial Cardiac Microtissues for Chamber-Specific Arrhythmic Risk Assessment.

Published in:

Cellular & Molecular Bioengineering, 2021, v. 14, n. 5, p. 441, doi. 10.1007/s12195-021-00703-x

By:

Soepriatna, Arvin H.;
Kim, Tae Yun;
Daley, Mark C.;
Song, Elena;
Choi, Bum-Rak;
Coulombe, Kareen L. K.

Publication type:

Article

Circe’s Victims: Are We Too Easily Seduced by the Siren Song of Mathematical Physics?

Published in:

2018

By:

Daley, Mark

Publication type:

Letter to the Editor

Neural network models of the tactile system develop first-order units with spatially complex receptive fields.

Published in:

PLoS ONE, 2018, v. 13, n. 6, p. 1, doi. 10.1371/journal.pone.0199196

By:

Zhao, Charlie W.;
Daley, Mark J.;
Pruszynski, J. Andrew

Publication type:

Article

Beyond Pharmaceuticals: Fit-for-Purpose New Approach Methodologies for Environmental Cardiotoxicity Testing.

Published in:

Altex, 2023, v. 40, n. 1, p. 103, doi. 10.14573/altex.2109131

By:

Daley, Mark C.;
Mende, Ulrike;
Choi, Bum-Rak;
McMullen, Patrick D.;
Coulombe, Kareen L. K.

Publication type:

Article

In vitro to in vivo extrapolation from 3D hiPSC-derived cardiac microtissues and physiologically based pharmacokinetic modeling to inform next-generation arrhythmia risk assessment.

Published in:

Toxicological Sciences, 2024, v. 201, n. 1, p. 145, doi. 10.1093/toxsci/kfae079

By:

Daley, Mark C;
Moreau, Marjory;
Bronk, Peter;
Fisher, Jeffrey;
Kofron, Celinda M;
Mende, Ulrike;
McMullen, Patrick;
Choi, Bum-Rak;
Coulombe, Kareen

Publication type:

Article

A novel multiplex biomarker panel for profiling human acute and chronic kidney disease.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-47418-9

By:

Van Nynatten, Logan R.;
Miller, Michael R.;
Patel, Maitray A.;
Daley, Mark;
Filler, Guido;
Badrnya, Sigrun;
Miholits, Markus;
Webb, Brian;
McIntyre, Christopher W.;
Fraser, Douglas D.

Publication type:

Article

Putative biomarkers of hepatic dysfunction in critically ill sepsis patients.

Published in:

Clinical & Experimental Medicine, 2025, v. 25, n. 1, p. 1, doi. 10.1007/s10238-024-01545-3

By:

Van Nynatten, Logan R.;
Patel, Maitray A.;
Daley, Mark;
Miller, Michael R.;
Cepinskas, Gediminas;
Slessarev, Marat;
Russell, James A.;
Fraser, Douglas D.

Publication type:

Article

Repetitive mild traumatic brain injury in mice triggers a slowly developing cascade of long-term and persistent behavioral deficits and pathological changes.

Published in:

Acta Neuropathologica Communications, 2021, v. 9, n. 1, p. 1, doi. 10.1186/s40478-021-01161-2

By:

Xu, Xiaoyun;
Cowan, Matthew;
Beraldo, Flavio;
Schranz, Amy;
McCunn, Patrick;
Geremia, Nicole;
Brown, Zalman;
Patel, Maitray;
Nygard, Karen L.;
Khazaee, Reza;
Lu, Lihong;
Liu, Xingyu;
Strong, Michael J.;
Dekaban, Gregory A.;
Menon, Ravi;
Bartha, Robert;
Daley, Mark;
Mao, Haojie;
Prado, Vania;
Prado, Marco A. M.

Publication type:

Article

The Association between Multimorbidity and Cognitive Decline: A Systematic Review.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2022, v. 18, n. 11, p. 1, doi. 10.1002/alz.067769

By:

Vargas‐González, Juan‐Camilo;
Stranges, Saverio;
Speechley, Mark R.;
Daley, Mark J.;
Were, Jason;
Sharma, Ishor;
Hachinski, Vladimir

Publication type:

Article

The association of multimorbidity and neuropsychological test scores in Canadian cohorts recruited in 1991 and 2015.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2022, v. 18, n. 11, p. 1, doi. 10.1002/alz.067604

By:

Vargas‐González, Juan‐Camilo;
Hachinski, Vladimir;
Speechley, Mark R.;
Daley, Mark J.;
Were, Jason;
Sharma, Ishor;
Stranges, Saverio

Publication type:

Article

Transcriptional profiling of leukocytes in critically ill COVID19 patients: implications for interferon response and coagulation.

Published in:

Intensive Care Medicine Experimental, 2020, v. 8, n. 1, p. 1, doi. 10.1186/s40635-020-00361-9

By:

Gill, Sean E.;
dos Santos, Claudia C.;
O'Gorman, David B.;
Carter, David E.;
Patterson, Eric K.;
Slessarev, Marat;
Martin, Claudio;
Daley, Mark;
Miller, Michael R.;
Cepinskas, Gediminas;
Fraser, Douglas D.;
Lawson COVID19 Study Team;
Arntfield, Robert;
Ball, Ian;
Barkwell, Gordon;
Bentall, Tracey;
Bosma, Karen;
Cameron, Saoirse;
Campbell, Eileen;
Gillio-Meina, Carolina

Publication type:

Article

Networks of the Brain.

Published in:

2011

By:

DALEY, MARK;
CULHAM, JODY C.

Publication type:

Book Review

Classification of Lidar Measurements Using Supervised and Unsupervised Machine Learning Methods.

Published in:

Atmospheric Measurement Techniques Discussions, 2020, p. 1, doi. 10.5194/amt-2019-495

By:

Farhani, Ghazal;
Sica, Robert J.;
Daley, Mark Joseph

Publication type:

Article