Works by Dai, Yulin

Results: 59

Fucoidan JHCF4s from Hizikia fusiformis against ethanol-induced damage in vitro and in vivo.

Published in:

Food Science & Biotechnology, 2025, v. 34, n. 10, p. 2295, doi. 10.1007/s10068-025-01865-4

By:

Wu, Tongchuan;
Liu, Yichao;
Ai, Xindan;
Wang, Sixuan;
Hou, Aixia;
Zheng, Fei;
Yue, Hao;
Dai, Yulin

Publication type:

Article

Progression of prostate carcinoma is promoted by adipose stromal cell-secreted CXCL12 signaling in prostate epithelium.

Published in:

NPJ Precision Oncology, 2021, v. 5, n. 1, p. 1, doi. 10.1038/s41698-021-00160-9

By:

Su, Fei;
Daquinag, Alexes C.;
Ahn, Songyeon;
Saha, Achinto;
Dai, Yulin;
Zhao, Zhongming;
DiGiovanni, John;
Kolonin, Mikhail G.

Publication type:

Article

Total ginsenoside wild ginseng root improves spleen qi deficiency by regulating intestinal microbes and flora metabolites.

Published in:

Arabian Journal of Chemistry, 2023, v. 16, n. 11, p. N.PAG, doi. 10.1016/j.arabjc.2023.105232

By:

Li, Fangtong;
Zhang, Meiyu;
Cai, Yongyu;
Wu, Yongxi;
Wang, Yizhu;
Luo, Jing;
Pi, Zifeng;
Dai, Yulin;
Zheng, Fei;
Yue, Hao

Publication type:

Article

Prioritization of risk genes in multiple sclerosis by a refined Bayesian framework followed by tissue-specificity and cell type feature assessment.

Published in:

BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08580-y

By:

Liu, Andi;
Manuel, Astrid M.;
Dai, Yulin;
Zhao, Zhongming

Publication type:

Article

Correction to: The International Conference on Intelligent Biology and Medicine (ICIBM) 2019: bioinformatics methods and applications for human diseases.

Published in:

2020

By:

Zhao, Zhongming;
Dai, Yulin;
Zhang, Chi;
Mathé, Ewy;
Wei, Lai;
Wang, Kai

Publication type:

Correction Notice

The International Conference on Intelligent Biology and Medicine (ICIBM) 2019: bioinformatics methods and applications for human diseases.

Published in:

2019

By:

Zhao, Zhongming;
Dai, Yulin;
Zhang, Chi;
Mathé, Ewy;
Wei, Lai;
Wang, Kai

Publication type:

Editorial

Isoquercitrin Attenuates Osteogenic Injury in MC3T3 Osteoblastic Cells and the Zebrafish Model via the Keap1-Nrf2-ARE Pathway.

Published in:

Molecules, 2022, v. 27, n. 11, p. 3459, doi. 10.3390/molecules27113459

By:

Li, Xue;
Zhou, Dongyue;
Yang, Di;
Fu, Yunhua;
Tao, Xingyu;
Hu, Xuan;
Dai, Yulin;
Yue, Hao

Publication type:

Article

Advances in the Bioactivity and Environmental of Hizikia Fusiformis: A Systematic Review.

Published in:

Food Reviews International, 2024, v. 40, n. 9, p. 2641, doi. 10.1080/87559129.2023.2276777

By:

Hu, Xuan;
Li, Xue;
Gao, Wen;
Yang, Di;
Wu, Tongchuan;
Li, Jiannan;
Dai, Yulin;
Jeon, Youjin

Publication type:

Article

Gene expression in mice with endothelium-specific telomerase knockout.

Published in:

Frontiers in Cell & Developmental Biology, 2023, p. 1, doi. 10.3389/fcell.2023.1295072

By:

Zhanguo Gao;
Yongmei Yu;
Yulin Dai;
Zhongming Zhao;
Eckel-Mahan, Kristin;
Kolonin, Mikhail G.

Publication type:

Article

A Convergent Study of Genetic Variants Associated With Crohn's Disease: Evidence From GWAS, Gene Expression, Methylation, eQTL and TWAS.

Published in:

Frontiers in Genetics, 2019, p. N.PAG, doi. 10.3389/fgene.2019.00318

By:

Dai, Yulin;
Pei, Guangsheng;
Zhao, Zhongming;
Jia, Peilin

Publication type:

Article

The de novo sequence origin of two long non-coding genes from an inter-genic region.

Published in:

BMC Genomics, 2013, v. 14, p. 1, doi. 10.1186/1471-2164-14-S8-S6

By:

Yulin Dai;
Shengdi Li;
Xiao Dong;
Han Sun;
Chao Li;
Zhi Liu;
Beili Ying;
Guohui Ding;
Yixue Li

Publication type:

Article

Genome sequencing of strain Cellulosimicrobium sp. TH-20 with ginseng biotransformation ability.

Published in:

3 Biotech, 2017, v. 7, n. 4, p. 1, doi. 10.1007/s13205-017-0850-2

By:

Zheng, Fei;
Zhang, Wei;
Chu, Xiaodan;
Dai, Yulin;
Li, Jing;
Zhao, Huanxi;
Wen, Liankui;
Yue, Hao;
Yu, Shanshan

Publication type:

Article

A gene regulatory network approach harmonizes genetic and epigenetic signals and reveals repurposable drug candidates for multiple sclerosis.

Published in:

Human Molecular Genetics, 2023, v. 32, n. 6, p. 998, doi. 10.1093/hmg/ddac265

By:

Manuel, Astrid M;
Dai, Yulin;
Jia, Peilin;
Freeman, Leorah A;
Zhao, Zhongming

Publication type:

Article

Identifying candidate genes and drug targets for Alzheimer's disease by an integrative network approach using genetic and brain region-specific proteomic data.

Published in:

Human Molecular Genetics, 2022, v. 31, n. 19, p. 3341, doi. 10.1093/hmg/ddac124

By:

Liu, Andi;
Manuel, Astrid M;
Dai, Yulin;
Fernandes, Brisa S;
Enduru, Nitesh;
Jia, Peilin;
Zhao, Zhongming

Publication type:

Article

Identifying the active compounds and mechanism of action of TongFu XieXia Decoction for treating intestinal obstruction using network pharmacology combined with ultra‐high performance liquid chromatography‐quadrupole‐orbitrap mass spectrometry

Published in:

Rapid Communications in Mass Spectrometry: RCM, 2024, v. 38, n. 2, p. 1, doi. 10.1002/rcm.9664

By:

Ma, Liting;
Wu, Yongxi;
Luo, Jing;
Li, Fangtong;
Zhang, Meiyu;
Cai, Yongyu;
Dai, Yulin;
Pi, Zifeng;
Zheng, Fei;
Yue, Hao

Publication type:

Article

Effects of ginseng on short‐chain fatty acids and intestinal microbiota in rats with spleen‐qi deficiency based on gas chromatography–mass spectrometry and 16s rRNA technology.

Published in:

Rapid Communications in Mass Spectrometry: RCM, 2023, v. 37, n. 23, p. 1, doi. 10.1002/rcm.9640

By:

Zhang, Meiyu;
Pi, Yijun;
Ma, Liting;
Li, Fangtong;
Luo, Jing;
Cai, Yongyu;
Wu, Yongxi;
Liu, Ming;
Dai, Yulin;
Zheng, Fei;
Yue, Hao

Publication type:

Article

Biomarkers of Mycoplasma pneumoniae pneumonia in children by urine metabolomics based on Q Exactive liquid chromatography/tandem mass spectrometry.

Published in:

Rapid Communications in Mass Spectrometry: RCM, 2022, v. 36, n. 5, p. 1, doi. 10.1002/rcm.9234

By:

Jing Li;
Yunhua Fu;
Wei Jing;
Jie Li;
Xin Wang;
Jialing Chen;
Shuxin Sun;
Hao Yue;
Yulin Dai

Publication type:

Article

Metabolic study of ginsenoside Rg3 and glimepiride in type 2 diabetic rats by liquid chromatography coupled with quadrupole‐Orbitrap mass spectrometry.

Published in:

Rapid Communications in Mass Spectrometry: RCM, 2021, v. 35, n. 11, p. 1, doi. 10.1002/rcm.9083

By:

Yang, Di;
Li, Xue;
Fu, Yunhua;
Tao, Xingyu;
Zheng, Fei;
Yu, Jiangbo;
Yue, Hao;
Dai, Yulin

Publication type:

Article

Investigation of multi-trait associations using pathway-based analysis of GWAS summary statistics.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-018-5373-7

By:

Pei, Guangsheng;
Sun, Hua;
Dai, Yulin;
Liu, Xiaoming;
Zhao, Zhongming;
Jia, Peilin

Publication type:

Article

Gene2vec: distributed representation of genes based on co-expression.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-018-5370-x

By:

Du, Jingcheng;
Jia, Peilin;
Dai, Yulin;
Tao, Cui;
Zhao, Zhongming;
Zhi, Degui

Publication type:

Article

Association of CXCR6 with COVID-19 severity: delineating the host genetic factors in transcriptomic regulation.

Published in:

Human Genetics, 2021, v. 140, n. 9, p. 1313, doi. 10.1007/s00439-021-02305-z

By:

Dai, Yulin;
Wang, Junke;
Jeong, Hyun-Hwan;
Chen, Wenhao;
Jia, Peilin;
Zhao, Zhongming

Publication type:

Article

Genome-Wide Correlation of DNA Methylation and Gene Expression in Postmortem Brain Tissues of Opioid Use Disorder Patients.

Published in:

International Journal of Neuropsychopharmacology, 2021, v. 24, n. 11, p. 879, doi. 10.1093/ijnp/pyab043

By:

Liu, Andi;
Dai, Yulin;
Mendez, Emily F;
Hu, Ruifeng;
Fries, Gabriel R;
Najera, Katherine E;
Jiang, Shan;
Meyer, Thomas D;
Stertz, Laura;
Jia, Peilin;
Walss-Bass, Consuelo;
Zhao, Zhongming

Publication type:

Article

Accelerating bioinformatics research with International Conference on Intelligent Biology and Medicine 2020.

Published in:

BMC Bioinformatics, 2020, v. 21, n. 21, p. 1, doi. 10.1186/s12859-020-03890-y

By:

Guo, Yan;
Shen, Li;
Shi, Xinghua;
Wang, Kai;
Dai, Yulin;
Zhao, Zhongming

Publication type:

Article

Antihypertensive effect of fucoidan from Yangqicai (Sargassum fusiforme) in EA.hy-926 cells and spontaneously hypertensive rats.

Published in:

Journal of Applied Phycology, 2023, v. 35, n. 1, p. 397, doi. 10.1007/s10811-022-02868-y

By:

Li, FangTong;
Li, Xue;
Fu, YunHua;
Hu, Xuan;
Zhou, DongYue;
Dai, YuLin;
Jeon, YouJin

Publication type:

Article

Microbial conversion of ginsenoside Rd from Rb1 by the fungus mutant Aspergillus niger strain TH-10a.

Published in:

Preparative Biochemistry & Biotechnology, 2016, v. 46, n. 4, p. 336, doi. 10.1080/10826068.2015.1031391

By:

Feng, Li;
Xu, Chunchun;
Li, Zhuo;
Li, Jing;
Dai, Yulin;
Han, Hongxiang;
Yu, Shanshan;
Liu, Shuying

Publication type:

Article

Web‐grading—a tool to test personal grading of renal and prostate cancer.

Published in:

APMIS, 2023, v. 131, n. 10, p. 528, doi. 10.1111/apm.13347

By:

Kristiansen, Glen;
Schmid, Matthias;
Egevad, Lars;
Samaratunga, Hemamali;
Varma, Murali;
Inam, Kaan;
Thiesen, Hans‐Jürgen;
Delahunt, Brett;
Dai, Yulin

Publication type:

Article

Enhancing the utility of polygenic scores in Alzheimer's disease through systematic curation and annotation.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1507395

By:

Mwesigwa, Savannah;
Dai, Yulin;
Enduru, Nitesh;
Zhao, Zhongming

Publication type:

Article

scGWAS: landscape of trait-cell type associations by integrating single-cell transcriptomics-wide and genome-wide association studies.

Published in:

Genome Biology, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s13059-022-02785-w

By:

Jia, Peilin;
Hu, Ruifeng;
Yan, Fangfang;
Dai, Yulin;
Zhao, Zhongming

Publication type:

Article

Adipose tissue-specific ablation of Ces1d causes metabolic dysregulation in mice.

Published in:

Life Science Alliance, 2022, v. 5, n. 8, p. 1, doi. 10.26508/lsa.202101209

By:

Gang Li;
Xin Li;
Li Yang;
Shuyue Wang;
Yulin Dai;
Fekry, Baharan;
Veillon, Lucas;
Lin Tan;
Berdeaux, Rebecca;
Eckel-Mahan, Kristin;
Lorenzi, Philip L.;
Zhongming Zhao;
Lehner, Richard;
Kai Sun

Publication type:

Article

De novo mutations disturb early brain development more frequently than common variants in schizophrenia.

Published in:

American Journal of Medical Genetics. Part B: Neuropsychiatric Genetics, 2023, v. 192, n. 3/4, p. 62, doi. 10.1002/ajmg.b.32932

By:

Itai, Toshiyuki;
Jia, Peilin;
Dai, Yulin;
Chen, Jingchun;
Chen, Xiangning;
Zhao, Zhongming

Publication type:

Article

Multiple transcription factors contribute to inter-chromosomal interaction in yeast.

Published in:

BMC Systems Biology, 2018, v. 12, n. 8, p. N.PAG, doi. 10.1186/s12918-018-0643-1

By:

Dai, Yulin;
Li, Chao;
Pei, Guangsheng;
Dong, Xiao;
Ding, Guohui;
Zhao, Zhongming;
Li, Yixue;
Jia, Peilin

Publication type:

Article

Urine and serum metabolomics study of wild ginseng in rats with spleen‐qi deficiency using rapid resolution liquid chromatography coupled with quadrupole‐time‐of‐flight mass spectrometry.

Published in:

Journal of Separation Science, 2023, v. 46, n. 17, p. 1, doi. 10.1002/jssc.202300344

By:

Li, Fangtong;
Pi, Yijun;
Zhang, Meiyu;
Ma, Liting;
Wu, Yongxi;
Luo, Jing;
Cai, Yongyu;
Dai, Yulin;
Zheng, Fei;
Yue, Hao

Publication type:

Article

GENEVIC: GENetic data Exploration and Visualization via Intelligent interactive Console.

Published in:

Bioinformatics, 2024, v. 40, n. 10, p. 1, doi. 10.1093/bioinformatics/btae500

By:

Nath, Anindita;
Mwesigwa, Savannah;
Dai, Yulin;
Jiang, Xiaoqian;
Zhao, Zhongming

Publication type:

Article

deTS: tissue-specific enrichment analysis to decode tissue specificity.

Published in:

Bioinformatics, 2019, v. 35, n. 19, p. 3842, doi. 10.1093/bioinformatics/btz138

By:

Pei, Guangsheng;
Dai, Yulin;
Zhao, Zhongming;
Jia, Peilin

Publication type:

Article

WebCSEA: web-based cell-type-specific enrichment analysis of genes.

Published in:

Nucleic Acids Research, 2022, v. 50, n. W1, p. W782, doi. 10.1093/nar/gkac392

By:

Dai, Yulin;
Hu, Ruifeng;
Liu, Andi;
Cho, Kyung Serk;
Manuel, Astrid Marilyn;
Li, Xiaoyang;
Dong, Xianjun;
Jia, Peilin;
Zhao, Zhongming

Publication type:

Article

Predicting regulatory variants using a dense epigenomic mapped CNN model elucidated the molecular basis of trait-tissue associations.

Published in:

Nucleic Acids Research, 2021, v. 49, n. 1, p. 53, doi. 10.1093/nar/gkaa1137

By:

Pei, Guangsheng;
Hu, Ruifeng;
Dai, Yulin;
Manuel, Astrid Marilyn;
Zhao, Zhongming;
Jia, Peilin

Publication type:

Article

TSEA-DB: a trait–tissue association map for human complex traits and diseases.

Published in:

Nucleic Acids Research, 2020, v. 48, n. D1, p. D1022, doi. 10.1093/nar/gkz957

By:

Jia, Peilin;
Dai, Yulin;
Hu, Ruifeng;
Pei, Guangsheng;
Manuel, Astrid Marilyn;
Zhao, Zhongming

Publication type:

Article

ANCO-GeneDB: annotations and comprehensive analysis of candidate genes for alcohol, nicotine, cocaine and opioid dependence.

Published in:

Database: The Journal of Biological Databases & Curation, 2018, v. 2018, p. 1, doi. 10.1093/database/bay121

By:

Hu, Ruifeng;
Dai, Yulin;
Jia, Peilin;
Zhao, Zhongming

Publication type:

Article

Regulation of polysaccharide in Wu‐tou decoction on intestinal microflora and pharmacokinetics of small molecular compounds in AIA rats.

Published in:

Chinese Medicine, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s13020-024-00878-1

By:

Yang, Di;
Cheng, Xiaoxu;
Fan, Meiling;
Xie, Dong;
Liu, Zhiqiang;
Zheng, Fei;
Dai, Yulin;
Pi, Zifeng;
Yue, Hao

Publication type:

Article

Anti-Osteoporotic Effect of Viscozyme-Assisted Polysaccharide Extracts from Portulaca oleracea L. on H 2 O 2 -Treated MC3T3-E1 Cells and Zebrafish.

Published in:

Separations (2297-8739), 2022, v. 9, n. 5, p. 128, doi. 10.3390/separations9050128

By:

Fu, Yunhua;
Hu, Xuan;
Zhou, Dongyue;
Li, Xue;
Tao, Xingyu;
Yang, Di;
Zheng, Fei;
Dai, Yulin;
Yue, Hao

Publication type:

Article

A Fully‐Integrated Diamond Nitrogen‐Vacancy Magnetometer with Nanotesla Sensitivity.

Published in:

Advanced Quantum Technologies, 2025, v. 8, n. 4, p. 1, doi. 10.1002/qute.202300438

By:

Dai, Yulin;
Tian, Wenhui;
liu, Qing;
Chen, Bao;
Liu, Yushan;
Hu, Qidi;
Ma, Zheng;
Zhai, Yunpeng;
Wang, Haodong;
Dong, Ying;
Xu, Nanyang

Publication type:

Article

Hyperlipidemia-associated gene variations and expression patterns revealed by whole-genome and transcriptome sequencing of rabbit models.

Published in:

Scientific Reports, 2016, p. 26942, doi. 10.1038/srep26942

By:

Wang, Zhen;
Zhang, Jifeng;
Li, Hong;
Li, Junyi;
Niimi, Manabu;
Ding, Guohui;
Chen, Haifeng;
Xu, Jie;
Zhang, Hongjiu;
Xu, Ze;
Dai, Yulin;
Gui, Tuantuan;
Li, Shengdi;
Liu, Zhi;
Wu, Sujuan;
Cao, Mushui;
Zhou, Lu;
Lu, Xingyu;
Wang, Junxia;
Yang, Jing

Publication type:

Article

Characterization of genome-wide association study data reveals spatiotemporal heterogeneity of mental disorders.

Published in:

BMC Medical Genomics, 2020, v. 13, p. 1, doi. 10.1186/s12920-020-00832-8

By:

Dai, Yulin;
O'Brien, Timothy D.;
Pei, Guangsheng;
Zhao, Zhongming;
Jia, Peilin

Publication type:

Article

An integrative, genomic, transcriptomic and network-assisted study to identify genes associated with human cleft lip with or without cleft palate.

Published in:

BMC Medical Genomics, 2020, v. 13, p. 1, doi. 10.1186/s12920-020-0675-4

By:

Yan, Fangfang;
Dai, Yulin;
Iwata, Junichi;
Zhao, Zhongming;
Jia, Peilin

Publication type:

Article

Dense module searching for gene networks associated with multiple sclerosis.

Published in:

BMC Medical Genomics, 2020, v. 13, p. 1, doi. 10.1186/s12920-020-0674-5

By:

Manuel, Astrid M.;
Dai, Yulin;
Freeman, Leorah A.;
Jia, Peilin;
Zhao, Zhongming

Publication type:

Article

Genetic overlap between Alzheimer's disease and immune‐mediated diseases: An atlas of shared genetic determinants and biological convergence.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, p. 1, doi. 10.1002/alz.089871

By:

Enduru, Nitesh;
Fernandes, Brisa S.;
Bahrami, Shahram;
Dai, Yulin;
Andreassen, Ole;
Zhao, Zhongming

Publication type:

Article

Shared genetic components between brain regions identify potential therapeutic targets for Alzheimer's disease by integrative proteomic analysis.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2022, v. 18, n. 3, p. 1, doi. 10.1002/alz.061072

By:

Liu, Andi;
Manuel, Astrid M.;
Dai, Yulin;
Fernandes, Brisa S.;
Enduru, Nitesh;
Jia, Peilin;
Zhao, Zhongming

Publication type:

Article

A Method for Bridging Population-Specific Genotypes to Detect Gene Modules Associated with Alzheimer's Disease.

Published in:

Cells (2073-4409), 2022, v. 11, n. 14, p. N.PAG, doi. 10.3390/cells11142219

By:

Dai, Yulin;
Jia, Peilin;
Zhao, Zhongming;
Gottlieb, Assaf

Publication type:

Article

Causal Inference of Genetic Variants and Genes in Amyotrophic Lateral Sclerosis.

Published in:

Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.917142

By:

Pan, Siyu;
Liu, Xinxuan;
Liu, Tianzi;
Zhao, Zhongming;
Dai, Yulin;
Wang, Yin-Ying;
Jia, Peilin;
Liu, Fan

Publication type:

Article

Drug-Target Network Study Reveals the Core Target-Protein Interactions of Various COVID-19 Treatments.

Published in:

Genes, 2022, v. 13, n. 7, p. 1210, doi. 10.3390/genes13071210

By:

Dai, Yulin;
Yu, Hui;
Yan, Qiheng;
Li, Bingrui;
Liu, Andi;
Liu, Wendao;
Jiang, Xiaoqian;
Kim, Yejin;
Guo, Yan;
Zhao, Zhongming

Publication type:

Article