Works by Cregan, Perry

Results: 87

Developing market class specific InDel markers from next generation sequence data in Phaseolus vulgaris L.

Published in:

Frontiers in Plant Science, 2014, v. 5, p. 1, doi. 10.3389/fpls.2014.00185

By:

Samira Mafi Moghaddam;
Qijian Song;
Sujan Mamidi;
Schmutz, Jeremy;
Lee, Rian;
Cregan, Perry;
Osorno, Juan M.;
McClean, Phillip E.

Publication type:

Article

Developing market class specific InDel markers from next generation sequence data in Phaseolus vulgaris L.

Published in:

Frontiers in Plant Science, 2014, v. 5, p. 1, doi. 10.3389/fpls.2014.00185

By:

Moghaddam, Samira Mafi;
Qijian Song;
Mamidi, Sujan;
Schmutz, Jeremy;
Lee, Rian;
Cregan, Perry;
Osorno, Juan M.;
McClean, Phillip E.

Publication type:

Article

Developing market class specific InDel markers from next generation sequence data in Phaseolus vulgaris L.

Published in:

Frontiers in Plant Science, 2013, v. 4, p. 1, doi. 10.3389/fpls.2014.00185

By:

Moghaddam, Samira Mafi;
Song, Qijian;
Mamidi, Sujan;
Schmutz, Jeremy;
Lee, Rian;
Cregan, Perry;
Osorno, Juan M.;
McClean, Phillip E.

Publication type:

Article

MOLECULAR MAPPING OF THE FASCIATION MUTATION IN SOYBEAN, GLYCINE MAX (LEGUMINOSAE).

Published in:

American Journal of Botany, 2002, v. 89, n. 4, p. 559, doi. 10.3732/ajb.89.4.559

By:

Karakaya, H. Caglar;
Yuhong Tang;
Cregan, Perry B.;
Knap, Halina T.

Publication type:

Article

Proteomic analysis of the distribution of the major seed allergens in wild, landrace, ancestral, and modern soybean genotypes.

Published in:

Journal of the Science of Food & Agriculture, 2007, v. 87, n. 13, p. 2511, doi. 10.1002/jsfa.3017

By:

Xu, Chenping;
Caperna, Thomas J;
Garrett, Wesley M;
Cregan, Perry;
Bae, Hanhong;
Luthria, Devanand L;
Natarajan, Savithiry

Publication type:

Article

Genetic Diversity and Phylogenetic Relationships of Annual and Perennial Glycine Species.

Published in:

G3: Genes | Genomes | Genetics, 2019, v. 9, n. 7, p. 2325, doi. 10.1534/g3.119.400220

By:

Eun-Young Hwang;
He Wei;
Schroeder, Steven G.;
Fickus, Edward W.;
Quigley, Charles V.;
Elia, Patrick;
Araya, Susan;
Faming Dong;
Costa, Larissa;
Ferreira, Marcio Elias;
Cregan, Perry B.;
Qijian Song

Publication type:

Article

Genetic Architecture of Soybean Yield and Agronomic Traits.

Published in:

G3: Genes | Genomes | Genetics, 2018, v. 8, n. 10, p. 3367, doi. 10.1534/g3.118.200332

By:

Diers, Brian W.;
Specht, Jim;
Rainey, Katy Martin;
Cregan, Perry;
Qijian Song;
Ramasubramanian, Vishnu;
Graef, George;
Nelson, Randall;
Schapaugh, William;
Dechun Wang;
Shannon, Grover;
McHale, Leah;
Kantartzi, Stella K.;
Xavier, Alencar;
Mian, Rouf;
Stupar, Robert M.;
Michno, Jean-Michel;
An, Yong-Qiang Charles;
Goettel, Wolfgang;
Ward, Russell

Publication type:

Article

Genome-Wide Analysis of Grain Yield Stability and Environmental Interactions in a Multiparental Soybean Population.

Published in:

G3: Genes | Genomes | Genetics, 2018, v. 8, n. 2, p. 519, doi. 10.1534/g3.117.300300

By:

Xavier, Alencar;
Jarquin, Diego;
Howard, Reka;
Ramasubramanian, Vishnu;
Specht, James E.;
Graef, George L.;
Beavis, William D.;
Diers, Brian W.;
Song, Qijian;
Cregan, Perry B.;
Nelson, Randall;
Mian, Rouf;
Shannon, J. Grover;
McHale, Leah;
Dechun Wang;
Schapaugh, William;
Lorenz, Aaron J.;
Shizhong Xu;
Muir, William M.;
Rainey, Katy M.

Publication type:

Article

Multi-Population Selective Genotyping to Identify Soybean [Glycine max (L.) Merr.] Seed Protein and Oil QTLs.

Published in:

G3: Genes | Genomes | Genetics, 2016, v. 6, n. 6, p. 1635, doi. 10.1534/g3.116.027656

By:

Phansak, Piyaporn;
Soonsuwon, Watcharin;
Hyten, David L.;
Song, Qijian;
Cregan, Perry B.;
Graef, George L.;
Specht, James E.

Publication type:

Article

Genome-Wide Association Study of Ureide Concentration in Diverse Maturity Group IV Soybean [Glycine max (L.) Merr.] Accessions.

Published in:

G3: Genes | Genomes | Genetics, 2015, v. 5, n. 11, p. 2391, doi. 10.1534/g3.115.021774

By:

Ray, Jeffery D.;
Dhanapal, Arun Prabhu;
Singh, Shardendu K.;
Hoyos-Villegas, Valerio;
Smith, James R.;
Purcell, Larry C.;
King, C. Andy;
Boykin, Debbie;
Cregan, Perry B.;
Qijian Song;
Fritschi, Felix B.

Publication type:

Article

SNP Assay Development for Linkage Map Construction, Anchoring Whole-Genome Sequence, and Other Genetic and Genomic Applications in Common Bean.

Published in:

G3: Genes | Genomes | Genetics, 2015, v. 5, n. 11, p. 2285, doi. 10.1534/g3.115.020594

By:

Qijian Song;
Gaofeng Jia;
Hyten, David L.;
Jenkins, Jerry;
Eun-Young Hwang;
Schroeder, Steven G.;
Osorno, Juan M.;
Schmutz, Jeremy;
Jackson, Scott A.;
McClean, Phillip E.;
Cregan, Perry B.

Publication type:

Article

Fingerprinting Soybean Germplasm and Its Utility in Genomic Research.

Published in:

G3: Genes | Genomes | Genetics, 2015, v. 5, n. 10, p. 1999, doi. 10.1534/g3.115.019000

By:

Qijian Song;
Hyten, David L.;
Gaofeng Jia;
Quigley, Charles V.;
Fickus, Edward W.;
Nelson, Randall L.;
Cregan, Perry B.

Publication type:

Article

Molecular Characterization of Resistance to Soybean Rust (Phakopsora pachyrhizi Syd. & Syd.) in Soybean Cultivar DT 2000 (PI 635999).

Published in:

PLoS ONE, 2016, v. 11, n. 12, p. 1, doi. 10.1371/journal.pone.0164493

By:

Vuong, Tri D.;
Walker, David R.;
Nguyen, Binh T.;
Nguyen, Tuyet T.;
Dinh, Hoan X.;
Hyten, David L.;
Cregan, Perry B.;
Sleper, David A.;
Lee, Jeong D.;
Shannon, James G.;
Nguyen, Henry T.

Publication type:

Article

Pericentromeric Effects Shape the Patterns of Divergence, Retention, and Expression of Duplicated Genes in the Paleopolyploid Soybean.

Published in:

Plant Cell, 2012, v. 24, n. 1, p. 21, doi. 10.1105/tpc.111.092759

By:

Du, Jianchang;
Tian, Zhixi;
Sui, Yi;
Zhao, Meixia;
Song, Qijian;
Cannon, Steven B.;
Cregan, Perry;
Ma, Jianxin

Publication type:

Article

Identifying and Validating a Quantitative Trait Locus on Chromosome 14 Underlying Stearic Acid in a Soybean Landrace.

Published in:

Journal of Crop Improvement, 2016, v. 30, n. 2, p. 152, doi. 10.1080/15427528.2015.1135224

By:

Yan, Long;
Deng, Yingying;
Song, Qijian;
Cregan, Perry B.;
Chen, Pengyin;
Lei, Yakun;
Yang, Chunyan;
Chen, Qiang;
Di, Rui;
Liu, Bingqiang;
Zhang, Mengchen

Publication type:

Article

Genetic linkage map of Phaeosphaeria nodorum, the causal agent of stagonospora nodorum blotch disease of wheat.

Published in:

European Journal of Plant Pathology, 2009, v. 124, n. 4, p. 681, doi. 10.1007/s10658-009-9454-y

By:

Arkadiusz Malkus;
Perry Cregan;
Edward Arseniuk;
Peter Ueng

Publication type:

Article

Construction of high resolution genetic linkage maps to improve the soybean genome sequence assembly Glyma1.01.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-015-2344-0

By:

Qijian Song;
Jenkins, Jerry;
Gaofeng Jia;
Hyten, David L.;
Pantalone, Vince;
Jackson, Scott A.;
Schmutz, Jeremy;
Cregan, Perry B.

Publication type:

Article

Genomic consequences of selection and genome-wide association mapping in soybean.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1872-y

By:

Zixiang Wen;
Boyse, John F.;
Qijian Song;
Cregan, Perry B.;
Dechun Wang

Publication type:

Article

Genomic consequences of selection and genome-wide association mapping in soybean.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 671, doi. 10.1186/s12864-015-1872-y

By:

Wen, Zixiang;
Boyse, John F.;
Song, Qijian;
Cregan, Perry B.;
Wang, Dechun

Publication type:

Article

Genome-wide association study for flowering time, maturity dates and plant height in early maturing soybean (Glycine max) germplasm.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1441-4

By:

Jiaoping Zhang;
Qijian Song;
Cregan, Perry B.;
Nelson, Randall L.;
Xianzhi Wang;
Jixiang Wu;
Guo-Liang Jiang

Publication type:

Article

Genome-wide association study for flowering time, maturity dates and plant height in early maturing soybean (Glycine max) germplasm.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 217, doi. 10.1186/s12864-015-1441-4

By:

Jiaoping Zhang;
Qijian Song;
Cregan, Perry B;
Nelson, Randall L;
Xianzhi Wang;
Jixiang Wu;
Guo-Liang Jiang

Publication type:

Article

Application of in silico bulked segregant analysis for rapid development of markers linked to Bean common mosaic virus resistance in common bean.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 903, doi. 10.1186/1471-2164-15-903

By:

Bello, Marco H.;
Moghaddam, Samira M.;
Massoudi, Mark;
McClean, Phillip E.;
Cregan, Perry B.;
Miklas, Phillip N.

Publication type:

Article

Genome-wide association mapping of quantitative resistance to sudden death syndrome in soybean.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 809, doi. 10.1186/1471-2164-15-809

By:

Zixiang Wen;
Ruijuan Tan;
Jiazheng Yuan;
Bales, Carmille;
Wenyan Du;
Shichen Zhang;
Chilvers, Martin I.;
Schmidt, Cathy;
Qijian Song;
Cregan, Perry B.;
Dechun Wang

Publication type:

Article

A genome-wide association study of seed protein and oil content in soybean.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-1

By:

Eun-Young Hwang;
Qijian Song;
Jia, Gaofeng;
Specht, James E.;
Hyten, David L.;
Costa, Jose;
Cregan, Perry B.

Publication type:

Article

Identification and validation of quantitative trait loci for seed yield, oil and protein contents in two recombinant inbred line populations of soybean.

Published in:

Molecular Genetics & Genomics, 2014, v. 289, n. 5, p. 935, doi. 10.1007/s00438-014-0865-x

By:

Wang, Xianzhi;
Jiang, Guo-Liang;
Green, Marci;
Scott, Roy;
Song, Qijian;
Hyten, David;
Cregan, Perry

Publication type:

Article

Mapping novel aphid resistance QTL from wild soybean, Glycine soja 85-32.

Published in:

Theoretical & Applied Genetics, 2017, v. 130, n. 9, p. 1941, doi. 10.1007/s00122-017-2935-z

By:

Zhang, Shichen;
Zhang, Zhongnan;
Bales, Carmille;
Gu, Cuihua;
DiFonzo, Chris;
Li, Ming;
Song, Qijian;
Cregan, Perry;
Yang, Zhenyu;
Wang, Dechun

Publication type:

Article

High-resolution mapping reveals linkage between genes in common bean cultivar Ouro Negro conferring resistance to the rust, anthracnose, and angular leaf spot diseases.

Published in:

Theoretical & Applied Genetics, 2017, v. 130, n. 8, p. 1705, doi. 10.1007/s00122-017-2920-6

By:

Valentini, Giseli;
Gonçalves-Vidigal, Maria;
Lima Castro, Sandra;
Hurtado-Gonzales, Oscar;
Cregan, Perry;
Song, Qijian;
Pastor-Corrales, Marcial

Publication type:

Article

Phenotypic variation and identification of quantitative trait loci for ozone tolerance in a Fiskeby III × Mandarin (Ottawa) soybean population.

Published in:

Theoretical & Applied Genetics, 2016, v. 129, n. 6, p. 1113, doi. 10.1007/s00122-016-2687-1

By:

Burton, Amy;
Burkey, Kent;
Carter, Thomas;
Orf, James;
Cregan, Perry

Publication type:

Article

Genome-wide association study, genomic prediction and marker-assisted selection for seed weight in soybean ( Glycine max).

Published in:

Theoretical & Applied Genetics, 2016, v. 129, n. 1, p. 117, doi. 10.1007/s00122-015-2614-x

By:

Zhang, Jiaoping;
Song, Qijian;
Cregan, Perry;
Jiang, Guo-Liang

Publication type:

Article

Confirmation of delayed canopy wilting QTLs from multiple soybean mapping populations.

Published in:

Theoretical & Applied Genetics, 2015, v. 128, n. 10, p. 2047, doi. 10.1007/s00122-015-2566-1

By:

Hwang, Sadal;
King, C.;
Ray, Jeffery;
Cregan, Perry;
Chen, Pengyin;
Carter, Thomas;
Li, Zenglu;
Abdel-Haleem, Hussein;
Matson, Kevin;
Schapaugh, William;
Purcell, Larry

Publication type:

Article

Erratum to: Genome-wide association study (GWAS) of carbon isotope ratio (δC) in diverse soybean [ Glycine max (L.) Merr.] genotypes.

Published in:

2015

By:

Dhanapal, Arun;
Ray, Jeffery;
Singh, Shardendu;
Hoyos-Villegas, Valerio;
Smith, James;
Purcell, Larry;
Andy King, C.;
Cregan, Perry;
Song, Qijian;
Fritschi, Felix

Publication type:

Erratum

Identification and evaluation of quantitative trait loci underlying resistance to multiple HG types of soybean cyst nematode in soybean PI 437655.

Published in:

Theoretical & Applied Genetics, 2015, v. 128, n. 1, p. 15, doi. 10.1007/s00122-014-2409-5

By:

Jiao, Yongqing;
Vuong, Tri;
Liu, Yan;
Meinhardt, Clinton;
Liu, Yang;
Joshi, Trupti;
Cregan, Perry;
Xu, Dong;
Shannon, J.;
Nguyen, Henry

Publication type:

Article

Genome-wide association study (GWAS) of carbon isotope ratio (δC) in diverse soybean [ Glycine max (L.) Merr.] genotypes.

Published in:

Theoretical & Applied Genetics, 2015, v. 128, n. 1, p. 73, doi. 10.1007/s00122-014-2413-9

By:

Dhanapal, Arun;
Ray, Jeffery;
Singh, Shardendu;
Hoyos-Villegas, Valerio;
Smith, James;
Purcell, Larry;
Andy King, C.;
Cregan, Perry;
Song, Qijian;
Fritschi, Felix

Publication type:

Article

Mapping the low palmitate fap1 mutation and validation of its effects in soybean oil and agronomic traits in three soybean populations.

Published in:

Theoretical & Applied Genetics, 2014, v. 127, n. 1, p. 97, doi. 10.1007/s00122-013-2204-8

By:

Cardinal, Andrea;
Whetten, Rebecca;
Wang, Sanbao;
Auclair, Jérôme;
Hyten, David;
Cregan, Perry;
Bachlava, Eleni;
Gillman, Jason;
Ramirez, Martha;
Dewey, Ralph;
Upchurch, Greg;
Miranda, Lilian;
Burton, Joseph

Publication type:

Article

Inheritance of soybean aphid resistance in 21 soybean plant introductions.

Published in:

Theoretical & Applied Genetics, 2014, v. 127, n. 1, p. 43, doi. 10.1007/s00122-013-2199-1

By:

Fox, Carolyn;
Kim, Ki-Seung;
Cregan, Perry;
Hill, Curtis;
Hartman, Glen;
Diers, Brian

Publication type:

Article

Mapping soybean aphid resistance genes in PI 567598B.

Published in:

Theoretical & Applied Genetics, 2013, v. 126, n. 8, p. 2081, doi. 10.1007/s00122-013-2120-y

By:

Bales, Carmille;
Zhang, Guorong;
Liu, Menghan;
Mensah, Clarice;
Gu, Cuihua;
Song, Qijian;
Hyten, David;
Cregan, Perry;
Wang, Dechun

Publication type:

Article

QTL, additive and epistatic effects for SCN resistance in PI 437654.

Published in:

Theoretical & Applied Genetics, 2009, v. 118, n. 6, p. 1093, doi. 10.1007/s00122-009-0965-x

By:

Xiaolei Wu;
Blake, Sean;
Sleper, David A.;
Shannon, J. Grover;
Cregan, Perry;
Nguyen, Henry T.

Publication type:

Article

SNP-PHAGE -- High throughput SNP discovery pipeline.

Published in:

BMC Bioinformatics, 2006, v. 7, p. 1, doi. 10.1186/1471-2105-7-468

By:

Matukumalli, Lakshmi K;
Grefenstette, John J;
Hyten, David L;
Ik-Young Choi;
Cregan, Perry B;
Van Tassell, Curtis P

Publication type:

Article

Application of machine learning in SNP discovery.

Published in:

BMC Bioinformatics, 2006, v. 7, p. 4, doi. 10.1186/1471-2105-7-4

By:

Matukumalli, Lakshmi K;
Grefenstette, John J;
Hyten, David L;
Ik-Young Choi;
Cregan, Perry B;
Van Tassell, Curtis P

Publication type:

Article

High-throughput genotyping with the GoldenGate assay in the complex genome of soybean.

Published in:

Theoretical & Applied Genetics, 2008, v. 116, n. 7, p. 945, doi. 10.1007/s00122-008-0726-2

By:

Hyten, David;
Song, Qijian;
Choi, Ik-Young;
Yoon, Mun-Sup;
Specht, James;
Matukumalli, Lakshmi;
Nelson, Randall;
Shoemaker, Randy;
Young, Nevin;
Cregan, Perry

Publication type:

Article

Abnormal leaf formation in soybean: genetic and environmental effects.

Published in:

Theoretical & Applied Genetics, 2006, v. 113, n. 1, p. 137, doi. 10.1007/s00122-006-0280-8

By:

Orf, James;
Chase, Kevin;
Specht, James;
Ik-Young Choi;
Cregan, Perry;
Lark, Karl

Publication type:

Article

Discovery of single nucleotide polymorphisms in soybean using primers designed from ESTs.

Published in:

Euphytica, 2004, v. 139, n. 2, p. 147, doi. 10.1007/s10681-004-2561-0

By:

Van, Kyujung;
Hwang, Eun-Young;
Kim, Moon Young;
Kim, Yong-Hwan;
Cho, Young-Il;
Cregan, Perry B.;
Lee, Suk-Ha

Publication type:

Article

QTL controlling partial resistance to Stagonospora nodorum leaf blotch in winter wheat cultivar Alba.

Published in:

Euphytica, 2004, v. 137, n. 2, p. 225, doi. 10.1023/B:EUPH.0000041589.47544.de

By:

Arseniuk, Edward;
Czembor, Pawel C.;
Czaplicki, Andrzej;
Song, Qijian;
Cregan, Perry B.;
Hoffman, David L.;
Ueng, Peter P.

Publication type:

Article

Length Polymorphisms of Simple Sequence Repeat DNA in Soybean.

Published in:

Genetics, 1992, v. 132, n. 4, p. 1131

By:

Akkaya, Mahinur S.;
Bhagwat, Arvind A.;
Cregan, Perry B.

Publication type:

Article

Fine Mapping and Characterization of Candidate Genes that Control Resistance to Cercospora sojina K. Hara in Two Soybean Germplasm Accessions.

Published in:

PLoS ONE, 2015, v. 10, n. 5, p. 1, doi. 10.1371/journal.pone.0126753

By:

Pham, Anh-Tung;
Harris, Donna K.;
Buck, James;
Hoskins, Aaron;
Serrano, Jonathan;
Abdel-Haleem, Hussein;
Cregan, Perry;
Song, Qijian;
Boerma, H. Roger;
Li, Zenglu

Publication type:

Article

Identification of Novel QTL Governing Root Architectural Traits in an Interspecific Soybean Population.

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0120490

By:

Manavalan, Lakshmi P.;
Prince, Silvas J.;
Musket, Theresa A.;
Chaky, Julian;
Deshmukh, Rupesh;
Vuong, Tri D.;
Song, Li;
Cregan, Perry B.;
Nelson, James C.;
Shannon, J. Grover;
Specht, James E.;
Nguyen, Henry T.

Publication type:

Article

Development and Evaluation of SoySNP50K, a High- Density Genotyping Array for Soybean.

Published in:

PLoS ONE, 2013, v. 8, n. 1, p. 1, doi. 10.1371/journal.pone.0054985

By:

Qijian Song;
Hyten, David L.;
Gaofeng Jia;
Quigley, Charles V.;
Fickus, Edward W.;
Nelson, Randall L.;
Cregan, Perry B.

Publication type:

Article

Meta-analysis to refine map position and reduce confidence intervals for delayed-canopy-wilting QTLs in soybean.

Published in:

Molecular Breeding, 2016, v. 36, n. 7, p. 1, doi. 10.1007/s11032-016-0516-5

By:

Hwang, Sadal;
King, C. Andy;
Chen, Pengyin;
Ray, Jeffery D.;
Cregan, Perry B.;
Carter, Thomas E. Jr.;
Li, Zenglu;
Abdel-Haleem, Hussein;
Matson, Kevin W.;
Schapaugh, William Jr.;
Purcell, Larry C.

Publication type:

Article

Quantitative trait locus analysis of unsaturated fatty acids in a recombinant inbred population of soybean.

Published in:

Molecular Breeding, 2014, v. 33, n. 2, p. 281, doi. 10.1007/s11032-013-9948-3

By:

Wang, Xianzhi;
Jiang, Guo-Liang;
Green, Marci;
Scott, Roy;
Hyten, David;
Cregan, Perry

Publication type:

Article

Quantitative trait locus analysis of saturated fatty acids in a population of recombinant inbred lines of soybean.

Published in:

Molecular Breeding, 2012, v. 30, n. 2, p. 1163, doi. 10.1007/s11032-012-9704-0

By:

Wang, Xianzhi;
Jiang, Guo-Liang;
Green, Marci;
Scott, Roy;
Hyten, David;
Cregan, Perry

Publication type:

Article