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Integrated analysis of genomic and transcriptomic data for the discovery of splice-associated variants in cancer.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-37266-6
By:
- Cotto, Kelsy C.;
- Feng, Yang-Yang;
- Ramu, Avinash;
- Richters, Megan;
- Freshour, Sharon L.;
- Skidmore, Zachary L.;
- Xia, Huiming;
- McMichael, Joshua F.;
- Kunisaki, Jason;
- Campbell, Katie M.;
- Chen, Timothy Hung-Po;
- Rozycki, Emily B.;
- Adkins, Douglas;
- Devarakonda, Siddhartha;
- Sankararaman, Sumithra;
- Lin, Yiing;
- Chapman, William C.;
- Maher, Christopher A.;
- Arora, Vivek;
- Dunn, Gavin P.
Publication type:
Article
Personalized ctDNA micro-panels can monitor and predict clinical outcomes for patients with triple-negative breast cancer.
Published in:
Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-20928-8
By:
- Barnell, Erica K.;
- Fisk, Bryan;
- Skidmore, Zachary L.;
- Cotto, Kelsy C.;
- Basu, Anamika;
- Anand, Aparna;
- Richters, Megan M.;
- Luo, Jingqin;
- Fronick, Catrina;
- Anurag, Meenakshi;
- Fulton, Robert;
- Ellis, Matthew J.;
- Griffith, Obi L.;
- Griffith, Malachi;
- Ademuyiwa, Foluso O.
Publication type:
Article
DGIdb 3.0: a redesign and expansion of the drug–gene interaction database.
Published in:
Nucleic Acids Research, 2018, v. 46, n. D1, p. D1068, doi. 10.1093/nar/gkx1143
By:
- Cotto, Kelsy C;
- Wagner, Alex H;
- Feng, Yang-Yang;
- Kiwala, Susanna;
- Coffman, Adam C;
- Spies, Gregory;
- Wollam, Alex;
- Spies, Nicholas C;
- Griffith, Obi L;
- Griffith, Malachi
Publication type:
Article
ORegAnno 3.0: a community-driven resource for curated regulatory annotation.
Published in:
Nucleic Acids Research, 2016, v. 44, n. 1, p. D126, doi. 10.1093/nar/gkv1203
By:
- Lesurf, Robert;
- Cotto, Kelsy C.;
- Wang, Grace;
- Griffith, Malachi;
- Kasaian, Katayoon;
- Jones, Steven J. M.;
- Montgomery, Stephen B.;
- Griffith, Obi L.
Publication type:
Article
Computational prediction of MHC anchor locations guides neoantigen identification and prioritization.
Published in:
Science Immunology, 2023, v. 8, n. 82, p. 1, doi. 10.1126/sciimmunol.abg2200
By:
- Xia, Huiming;
- McMichael, Joshua;
- Becker-Hapak, Michelle;
- Onyeador, Onyinyechi C.;
- Buchli, Rico;
- McClain, Ethan;
- Pence, Patrick;
- Supabphol, Suangson;
- Richters, Megan M.;
- Basu, Anamika;
- Ramirez, Cody A.;
- Puig-Saus, Cristina;
- Cotto, Kelsy C.;
- Freshour, Sharon L.;
- Hundal, Jasreet;
- Kiwala, Susanna;
- Goedegebuure, S. Peter;
- Johanns, Tanner M.;
- Dunn, Gavin P.;
- Ribas, Antoni
Publication type:
Article
Exploring the Genomic Landscape of Cancer Patient Cohorts with GenVisR.
Published in:
Current Protocols, 2021, v. 1, n. 9, p. 1, doi. 10.1002/cpz1.252
By:
- Skidmore, Zachary L.;
- Campbell, Katie M.;
- Cotto, Kelsy C.;
- Griffith, Malachi;
- Griffith, Obi L.
Publication type:
Article

Found: 6

Integrated analysis of genomic and transcriptomic data for the discovery of splice-associated variants in cancer.

Personalized ctDNA micro-panels can monitor and predict clinical outcomes for patients with triple-negative breast cancer.

DGIdb 3.0: a redesign and expansion of the drug–gene interaction database.

ORegAnno 3.0: a community-driven resource for curated regulatory annotation.

Computational prediction of MHC anchor locations guides neoantigen identification and prioritization.

Exploring the Genomic Landscape of Cancer Patient Cohorts with GenVisR.