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Faecal miRNA profiles associated with age, sex, BMI, and lifestyle habits in healthy individuals.
- Published in:
- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-00014-1
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- Publication type:
- Article
A versatile mathematical work-flow to explore how Cancer Stem Cell fate influences tumor progression.
- Published in:
- BMC Systems Biology, 2015, v. 9 Suppl 3, p. 1, doi. 10.1186/1752-0509-9-S3-S1
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- Publication type:
- Article
Sparsely Connected Autoencoders: A Multi-Purpose Tool for Single Cell omics Analysis.
- Published in:
- International Journal of Molecular Sciences, 2021, v. 22, n. 23, p. 12755, doi. 10.3390/ijms222312755
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- Publication type:
- Article
MET Exon 14 Skipping: A Case Study for the Detection of Genetic Variants in Cancer Driver Genes by Deep Learning.
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- International Journal of Molecular Sciences, 2021, v. 22, n. 8, p. 4217, doi. 10.3390/ijms22084217
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- Publication type:
- Article
Small Nucleolar RNAs Determine Resistance to Doxorubicin in Human Osteosarcoma.
- Published in:
- International Journal of Molecular Sciences, 2020, v. 21, n. 12, p. 4500, doi. 10.3390/ijms21124500
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- Publication type:
- Article
Docker4Circ: A Framework for the Reproducible Characterization of circRNAs from RNA-Seq Data.
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- International Journal of Molecular Sciences, 2020, v. 21, n. 1, p. 293, doi. 10.3390/ijms21010293
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- Publication type:
- Article
NETTAB 2014: From high-throughput structural bioinformatics to integrative systems biology.
- Published in:
- 2016
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- Publication type:
- Editorial
Dietary intervention for tertiary prevention in head and neck squamous cell carcinoma survivors: clinical and translational results of a randomized phase II trial.
- Published in:
- Frontiers in Oncology, 2024, p. 01, doi. 10.3389/fonc.2023.1321174
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- Publication type:
- Article
Application of the Euro Clonality next‐generation sequencing‐based marker screening approach to detect immunoglobulin heavy chain rearrangements in mantle cell lymphoma patients: first data from the Fondazione Italiana Linfomi MCL0208 trial.
- Published in:
- British Journal of Haematology, 2021, v. 194, n. 2, p. 378, doi. 10.1111/bjh.17519
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- Publication type:
- Article
Wisdom of crowds for robust gene network inference.
- Published in:
- Nature Methods, 2012, v. 9, n. 8, p. 796, doi. 10.1038/nmeth.2016
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- Publication type:
- Article
CONNECTOR, fitting and clustering of longitudinal data to reveal a new risk stratification system.
- Published in:
- Bioinformatics, 2023, v. 39, n. 5, p. 1, doi. 10.1093/bioinformatics/btad201
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- Publication type:
- Article
rCASC: reproducible classification analysis of single-cell sequencing data.
- Published in:
- GigaScience, 2019, v. 8, n. 9, p. N.PAG, doi. 10.1093/gigascience/giz105
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- Publication type:
- Article
A Mathematical-Biological Joint Effort to Investigate the Tumor-Initiating Ability of Cancer Stem Cells.
- Published in:
- PLoS ONE, 2014, v. 9, n. 9, p. 1, doi. 10.1371/journal.pone.0106193
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- Publication type:
- Article
Optimizing a Massive Parallel Sequencing Workflow for Quantitative miRNA Expression Analysis.
- Published in:
- PLoS ONE, 2012, v. 7, n. 2, p. 1, doi. 10.1371/journal.pone.0031630
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- Publication type:
- Article
Apoptosis Induced by Piroxicam plus Cisplatin Combined Treatment Is Triggered by p21 in Mesothelioma.
- Published in:
- PLoS ONE, 2011, v. 6, n. 8, p. 1, doi. 10.1371/journal.pone.0023569
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- Publication type:
- Article
A single cell RNAseq benchmark experiment embedding "controlled" cancer heterogeneity.
- Published in:
- Scientific Data, 2024, v. 11, n. 1, p. 1, doi. 10.1038/s41597-024-03002-y
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- Publication type:
- Article
Immune-Complexome Analysis Identifies Immunoglobulin-Bound Biomarkers That Predict the Response to Chemotherapy of Pancreatic Cancer Patients.
- Published in:
- Cancers, 2020, v. 12, n. 3, p. 746, doi. 10.3390/cancers12030746
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- Publication type:
- Article
Impacts of reopening strategies for COVID-19 epidemic: a modeling study in Piedmont region.
- Published in:
- 2020
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- Publication type:
- journal article
Alternative splicing detection workflow needs a careful combination of sample prep and bioinformatics analysis.
- Published in:
- BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/1471-2105-16-S9-S2
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- Publication type:
- Article
State of art fusion-finder algorithms are suitable to detect transcription-induced chimeras in normal tissues?
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- BMC Bioinformatics, 2013, v. 14, n. Suppl 7, p. 1, doi. 10.1186/1471-2105-14-S7-S2
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- Publication type:
- Article
Multi-level model for the investigation of oncoantigen-driven vaccination effect.
- Published in:
- BMC Bioinformatics, 2013, v. 14, n. Suppl 6, p. 1, doi. 10.1186/1471-2105-14-S6-S11
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- Publication type:
- Article
An integrated approach of immunogenomics and bioinformatics to identify new Tumor Associated Antigens (TAA) for mammary cancer immunological prevention.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. S7, doi. 10.1186/1471-2105-6-S4-S7
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- Publication type:
- Article
A computational approach based on the colored Petri net formalism for studying multiple sclerosis.
- Published in:
- BMC Bioinformatics, 2019, v. 20, p. 1, doi. 10.1186/s12859-019-3196-4
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- Publication type:
- Article
BITS2018: the fifteenth annual meeting of the Italian Society of Bioinformatics.
- Published in:
- 2019
- By:
- Publication type:
- Editorial
Combinatorial Pooling Enables Selective Sequencing of the Barley Gene Space.
- Published in:
- PLoS Computational Biology, 2013, v. 9, n. 4, p. 1, doi. 10.1371/journal.pcbi.1003010
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- Publication type:
- Article
Microarray data analysis and mining approaches.
- Published in:
- Briefings in Functional Genomics & Proteomics, 2007, v. 6, n. 4, p. 265
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- Publication type:
- Article
Immune Trait Shifts in Association With Tobacco Smoking: A Study in Healthy Women.
- Published in:
- Frontiers in Immunology, 2021, v. 11, p. N.PAG, doi. 10.3389/fimmu.2021.637974
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- Publication type:
- Article
MMP23B expression and protein levels in blood and urine are associated with bladder cancer.
- Published in:
- Carcinogenesis, 2018, v. 39, n. 10, p. 1254, doi. 10.1093/carcin/bgy098
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- Publication type:
- Article
Differentially methylated microRNAs in prediagnostic samples of subjects who developed breast cancer in the European Prospective Investigation into Nutrition and Cancer (EPIC-Italy) cohort.
- Published in:
- Carcinogenesis, 2015, v. 36, n. 10, p. 1144, doi. 10.1093/carcin/bgv102
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- Publication type:
- Article
The molecular landscape of colorectal cancer cell lines unveils clinically actionable kinase targets.
- Published in:
- Nature Communications, 2015, v. 6, n. 4, p. 7002, doi. 10.1038/ncomms8002
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- Publication type:
- Article
Integrative Analysis of Novel Metabolic Subtypes in Pancreatic Cancer Fosters New Prognostic Biomarkers.
- Published in:
- Frontiers in Oncology, 2019, p. N.PAG, doi. 10.3389/fonc.2019.00115
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- Publication type:
- Article
Biologic Data of Cynomolgus Monkeys Maintained under Laboratory Conditions.
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- PLoS ONE, 2016, v. 11, n. 6, p. 1, doi. 10.1371/journal.pone.0157003
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- Publication type:
- Article
Co-clustering numerical data under user-defined constraints.
- Published in:
- Statistical Analysis & Data Mining, 2010, v. 3, n. 1, p. 38, doi. 10.1002/sam.10064
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- Publication type:
- Article
Post-treatment recovery of suboptimal DNA repair capacity and gene expression levels in colorectal cancer patients.
- Published in:
- Molecular Carcinogenesis, 2015, v. 54, n. 9, p. 769, doi. 10.1002/mc.22141
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- Publication type:
- Article
oneChannelGUI: a graphical interface to Bioconductor tools, designed for life scientists who are not familiar with R language.
- Published in:
- Bioinformatics, 2007, v. 23, n. 24, p. 3406, doi. 10.1093/bioinformatics/btm469
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- Publication type:
- Article
Reproducible bioinformatics project: a community for reproducible bioinformatics analysis pipelines.
- Published in:
- BMC Bioinformatics, 2018, v. 19, n. 10, p. 211, doi. 10.1186/s12859-018-2296-x
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- Publication type:
- Article
HashClone: a new tool to quantify the minimal residual disease in B-cell lymphoma from deep sequencing data.
- Published in:
- BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1923-2
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- Publication type:
- Article
Mutant SOD1 and mitochondrial damage alter expression and splicing of genes controlling neuritogenesis in models of neurodegeneration.
- Published in:
- Human Mutation, 2011, v. 32, n. 2, p. 168, doi. 10.1002/humu.21394
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- Publication type:
- Article
In pancreatic cancer patients, chemotherapy reshapes the gene expression profile and antigen receptor repertoire of T lymphocytes and enhances their effector response to tumor-associated antigens.
- Published in:
- Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2024.1427424
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- Publication type:
- Article
Genomic lens on neuroglobin transcription.
- Published in:
- IUBMB Life, 2014, v. 66, n. 1, p. 46, doi. 10.1002/iub.1235
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- Publication type:
- Article
Tamoxifen Activates Transcription Factor EB and Triggers Protective Autophagy in Breast Cancer Cells by Inducing Lysosomal Calcium Release: A Gateway to the Onset of Endocrine Resistance.
- Published in:
- International Journal of Molecular Sciences, 2024, v. 25, n. 1, p. 458, doi. 10.3390/ijms25010458
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- Publication type:
- Article
SeqBox: RNAseq/ChIPseq reproducible analysis on a consumer game computer.
- Published in:
- Bioinformatics, 2018, v. 34, n. 5, p. 871, doi. 10.1093/bioinformatics/btx674
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- Publication type:
- Article
Chimera: a Bioconductor package for secondary analysis of fusion products.
- Published in:
- Bioinformatics, 2014, v. 30, n. 24, p. 3556, doi. 10.1093/bioinformatics/btu662
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- Publication type:
- Article
Sparsely-connected autoencoder (SCA) for single cell RNAseq data mining.
- Published in:
- NPJ Systems Biology & Applications, 2021, v. 7, n. 1, p. 1, doi. 10.1038/s41540-020-00162-6
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- Publication type:
- Article
State-of-the-Art Fusion-Finder Algorithms Sensitivity and Specificity.
- Published in:
- BioMed Research International, 2013, v. 2013, p. 1, doi. 10.1155/2013/340620
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- Publication type:
- Article
Peculiar Genes Selection: A new features selection method to improve classification performances in imbalanced data sets.
- Published in:
- PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0177475
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- Publication type:
- Article
From Inner Speech to Mind-Wandering: Developing a Comprehensive Model of Inner Mental Activity Trajectories.
- Published in:
- Integrative Psychological & Behavioral Science, 2019, v. 53, n. 2, p. 298, doi. 10.1007/s12124-018-9462-6
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- Publication type:
- Article
Selection of suitable reference genes for accurate normalization of gene expression profile studies in non-small cell lung cancer.
- Published in:
- BMC Cancer, 2006, v. 6, p. 200, doi. 10.1186/1471-2407-6-200
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- Publication type:
- Article
Computational modeling of the immune response in multiple sclerosis using epimod framework.
- Published in:
- BMC Bioinformatics, 2020, v. 21, n. 17, p. 1, doi. 10.1186/s12859-020-03823-9
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- Publication type:
- Article