Found: 44
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Cross-Border Movement of Highly Drug-Resistant Mycobacterium tuberculosis from Papua New Guinea to Australia through Torres Strait Protected Zone, 2010-2015.
- Published in:
- 2019
- By:
- Publication type:
- journal article
Detection of Streptococcus pyogenes M1<sub>UK</sub> in Australia and characterization of the mutation driving enhanced expression of superantigen SpeA.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-36717-4
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- Publication type:
- Article
Fine-Scale Estimation of Location of Birth from Genome-Wide Single-Nucleotide Polymorphism Data.
- Published in:
- Genetics, 2012, v. 190, n. 2, p. 669, doi. 10.1534/genetics.111.135657
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- Publication type:
- Article
Long-Read RNA Sequencing Identifies Polyadenylation Elongation and Differential Transcript Usage of Host Transcripts During SARS-CoV-2 In Vitro Infection.
- Published in:
- Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.832223
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- Publication type:
- Article
sCNAphase: using haplotype resolved read depth to genotype somatic copy number alterations from low cellularity aneuploid tumors.
- Published in:
- Nucleic Acids Research, 2017, v. 45, n. 5, p. 1, doi. 10.1093/nar/gkw1086
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- Publication type:
- Article
cnvCapSeq: detecting copy number variation in long-range targeted resequencing data.
- Published in:
- Nucleic Acids Research, 2014, v. 42, n. 20, p. e158, doi. 10.1093/nar/gku849
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- Publication type:
- Article
A population model for genotyping indels from next-generation sequence data.
- Published in:
- Nucleic Acids Research, 2013, v. 41, n. 3, p. e46, doi. 10.1093/nar/gks1143
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- Publication type:
- Article
cnvHap: an integrative population and haplotype–based multiplatform model of SNPs and CNVs.
- Published in:
- Nature Methods, 2010, v. 7, n. 7, p. 541, doi. 10.1038/nmeth.1466
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- Publication type:
- Article
Rapid diagnosis of Capnocytophaga canimorsus septic shock in an immunocompetent individual using real-time Nanopore sequencing: a case report.
- Published in:
- 2019
- By:
- Publication type:
- journal article
DeepGenGrep: a general deep learning-based predictor for multiple genomic signals and regions.
- Published in:
- Bioinformatics, 2022, v. 38, n. 17, p. 4053, doi. 10.1093/bioinformatics/btac454
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- Publication type:
- Article
Comparison of long-read methods for sequencing and assembly of a plant genome.
- Published in:
- GigaScience, 2020, v. 9, n. 12, p. 1, doi. 10.1093/gigascience/giaa146
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- Publication type:
- Article
Correction to: Chiron: translating nanopore raw signal directly into nucleotide sequence using deep learning.
- Published in:
- GigaScience, 2019, v. 8, n. 5, p. N.PAG, doi. 10.1093/gigascience/giz049
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- Publication type:
- Article
Chiron: translating nanopore raw signal directly into nucleotide sequence using deep learning.
- Published in:
- GigaScience, 2018, v. 7, n. 5, p. N.PAG, doi. 10.1093/gigascience/giy037
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- Publication type:
- Article
Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION™ sequencing.
- Published in:
- GigaScience, 2016, v. 5, p. 1, doi. 10.1186/s13742-016-0137-2
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- Publication type:
- Article
Optimising Treatment Outcomes for Children and Adults Through Rapid Genome Sequencing of Sepsis Pathogens. A Study Protocol for a Prospective, Multi-Centre Trial (DIRECT).
- Published in:
- Frontiers in Cellular & Infection Microbiology, 2021, v. 11, p. 1, doi. 10.3389/fcimb.2021.667680
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- Publication type:
- Article
Dysregulation of Complement System and CD4+ T Cell Activation Pathways Implicated in Allergic Response.
- Published in:
- PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0074821
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- Publication type:
- Article
Rare Genomic Structural Variants in Complex Disease: Lessons from the Replication of Associations with Obesity.
- Published in:
- PLoS ONE, 2013, v. 8, n. 3, p. 1, doi. 10.1371/journal.pone.0058048
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- Publication type:
- Article
MultiPhen: Joint Model of Multiple Phenotypes Can Increase Discovery in GWAS.
- Published in:
- PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0034861
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- Publication type:
- Article
Small Deletion Variants Have Stable Breakpoints Commonly Associated with Alu Elements.
- Published in:
- PLoS ONE, 2008, v. 3, n. 8, p. 1, doi. 10.1371/journal.pone.0003104
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- Publication type:
- Article
YHap: a population model for probabilistic assignment of Y haplogroups from re-sequencing data.
- Published in:
- BMC Bioinformatics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2105-14-331
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- Publication type:
- Article
Quantitative trait loci and differential gene expression analyses reveal the genetic basis for negatively associated β-carotene and starch content in hexaploid sweetpotato [Ipomoea batatas (L.) Lam.].
- Published in:
- Theoretical & Applied Genetics, 2020, v. 133, n. 1, p. 23, doi. 10.1007/s00122-019-03437-7
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- Publication type:
- Article
Whole genome deep sequencing analysis of cell-free DNA in samples with low tumour content.
- Published in:
- 2022
- By:
- Publication type:
- journal article
Accurate Single-Nucleotide Polymorphism Allele Assignment in Trisomic or Duplicated Regions by Using a Single Base--Extension Assay with MALDI-TOF Mass Spectrometry.
- Published in:
- Clinical Chemistry, 2011, v. 57, n. 8, p. 1188, doi. 10.1373/clinchem.2010.159558
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- Publication type:
- Article
ProsperousPlus: a one-stop and comprehensive platform for accurate protease-specific substrate cleavage prediction and machine-learning model construction.
- Published in:
- Briefings in Bioinformatics, 2023, v. 24, n. 6, p. 1, doi. 10.1093/bib/bbad372
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- Publication type:
- Article
TIMER is a Siamese neural network-based framework for identifying both general and species-specific bacterial promoters.
- Published in:
- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad209
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- Publication type:
- Article
ATTIC is an integrated approach for predicting A-to-I RNA editing sites in three species.
- Published in:
- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad170
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- Publication type:
- Article
Critical assessment of computational tools for prokaryotic and eukaryotic promoter prediction.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 2, p. 1, doi. 10.1093/bib/bbab551
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- Publication type:
- Article
Positive-unlabeled learning in bioinformatics and computational biology: a brief review.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1093/bib/bbab461
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- Publication type:
- Article
Porpoise: a new approach for accurate prediction of RNA pseudouridine sites.
- Published in:
- Briefings in Bioinformatics, 2021, v. 22, n. 6, p. 1, doi. 10.1093/bib/bbab245
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- Publication type:
- Article
Scaffolding and completing genome assemblies in real-time with nanopore sequencing.
- Published in:
- Nature Communications, 2017, v. 8, n. 2, p. 14515, doi. 10.1038/ncomms14515
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- Publication type:
- Article
cnvHiTSeq: integrative models for high-resolution copy number variation detection and genotyping using population sequencing data.
- Published in:
- Genome Biology, 2012, v. 13, n. 12, p. 1, doi. 10.1186/gb-2012-13-12-r120
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- Publication type:
- Article
Haplotype and isoform specific expression estimation using multi-mapping RNA-seq reads.
- Published in:
- Genome Biology, 2011, v. 12, n. 2, p. 1, doi. 10.1186/gb-2011-12-2-r13
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- Publication type:
- Article
Diagnosis of Kawasaki Disease Using a Minimal Whole-Blood Gene Expression Signature.
- Published in:
- JAMA Pediatrics, 2018, v. 172, n. 10, p. e182293, doi. 10.1001/jamapediatrics.2018.2293
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- Publication type:
- Article
Diagnosis of Bacterial Infection Using a 2-Transcript Host RNA Signature in Febrile Infants 60 Days or Younger.
- Published in:
- 2017
- By:
- Publication type:
- journal article
npInv: accurate detection and genotyping of inversions using long read sub-alignment.
- Published in:
- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2252-9
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- Publication type:
- Article
Genetic Determinants of Height Growth Assessed Longitudinally from Infancy to Adulthood in the Northern Finland Birth Cohort 1966.
- Published in:
- PLoS Genetics, 2009, v. 5, n. 3, p. 1, doi. 10.1371/journal.pgen.1000409
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- Publication type:
- Article
Ongoing human chromosome end extension revealed by analysis of BioNano and nanopore data.
- Published in:
- Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-34774-0
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- Publication type:
- Article
Octapeptin C4 and polymyxin resistance occur via distinct pathways in an epidemic XDR Klebsiella pneumoniae ST258 isolate.
- Published in:
- 2019
- By:
- Publication type:
- journal article
Simulating the dynamics of targeted capture sequencing with CapSim.
- Published in:
- Bioinformatics, 2018, v. 34, n. 5, p. 873, doi. 10.1093/bioinformatics/btx691
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- Publication type:
- Article
Real-time demultiplexing Nanopore barcoded sequencing data with npBarcode.
- Published in:
- Bioinformatics, 2017, v. 33, n. 24, p. 3988, doi. 10.1093/bioinformatics/btx537
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- Publication type:
- Article
Realtime analysis and visualization of MinION sequencing data with npReader.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 764, doi. 10.1093/bioinformatics/btv658
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- Publication type:
- Article
cnvOffSeq: detecting intergenic copy number variation using off-target exome sequencing data.
- Published in:
- 2014
- By:
- Publication type:
- Product Review
Inferring combined CNV/SNP haplotypes from genotype data.
- Published in:
- Bioinformatics, 2010, v. 26, n. 11, p. 1437, doi. 10.1093/bioinformatics/btq157
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- Publication type:
- Article
invertFREGENE: software for simulating inversions in population genetic data.
- Published in:
- Bioinformatics, 2010, v. 26, n. 6, p. 838, doi. 10.1093/bioinformatics/btq029
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- Publication type:
- Article