Works by Cohen, Trevor

Results: 36

In Pursuit of Theoretical Ground in Behavior Change Support Systems: Analysis of Peer-to-Peer Communication in a Health-Related Online Community.

Published in:

2016

By:

Myneni1, Sahiti;
Cobb2, Nathan;
Cohen1, Trevor;
Myneni, Sahiti;
Cobb, Nathan;
Cohen, Trevor

Publication type:

journal article

Complementing Observational Signals with Literature-Derived Distributed Representations for Post-Marketing Drug Surveillance.

Published in:

2020

By:

Mower, Justin;
Cohen, Trevor;
Subramanian, Devika

Publication type:

journal article

Reasoning with vectors: A continuous model for fast robust inference.

Published in:

Logic Journal of the IGPL, 2015, v. 23, n. 2, p. 141, doi. 10.1093/jigpal/jzu028

By:

WIDDOWS, DOMINIC;
COHEN, TREVOR

Publication type:

Article

EpiphaNet: An Interactive Tool to Support Biomedical Discoveries.

Published in:

Journal of Biomedical Discovery & Collaboration, 2010, v. 5, p. 21, doi. 10.5210/disco.v5i0.3090

By:

Cohen, Trevor;
Whitfield, G. Kerr;
Schvaneveldt, Roger W.;
Mukund, Kavitha;
Rindflesch, Thomas

Publication type:

Article

Content-Driven Analysis of an Online Community for Smoking Cessation: Integration of Qualitative Techniques, Automated Text Analysis, and Affiliation Networks.

Published in:

American Journal of Public Health, 2015, v. 105, n. 6, p. 1206, doi. 10.2105/AJPH.2014.302464

By:

Myneni, Sahiti;
Kayo Fujimoto;
Cobb, Nathan;
Cohen, Trevor

Publication type:

Article

Mining HPV Vaccine Knowledge Structures of Young Adults From Reddit Using Distributional Semantics and Pathfinder Networks.

Published in:

2020

By:

Amith, Muhammad;
Cohen, Trevor;
Cunningham, Rachel;
Savas, Lara S.;
Smith, Nina;
Cuccaro, Paula;
Gabay, Efrat;
Boom, Julie;
Schvaneveldt, Roger;
Cui Tao;
Tao, Cui

Publication type:

journal article

Mining HPV Vaccine Knowledge Structures of Young Adults From Reddit Using Distributional Semantics and Pathfinder Networks.

Published in:

Cancer Control: Journal of the Moffitt Cancer Center, 2020, v. 27, n. 1, p. 1, doi. 10.1177/1073274819891442

By:

Amith, Muhammad;
Cohen, Trevor;
Cunningham, Rachel;
Savas, Lara S.;
Smith, Nina;
Cuccaro, Paula;
Gabay, Efrat;
Boom, Julie;
Schvaneveldt, Roger;
Tao, Cui

Publication type:

Article

An active learning-enabled annotation system for clinical named entity recognition.

Published in:

2017

By:

Yukun Chen;
Lask, Thomas A.;
Qiaozhu Mei;
Qingxia Chen;
Sungrim Moon;
Jingqi Wang;
Ky Nguyen;
Tolulola Dawodu;
Cohen, Trevor;
Denny, Joshua C.;
Hua Xu;
Chen, Yukun;
Mei, Qiaozhu;
Chen, Qingxia;
Moon, Sungrim;
Wang, Jingqi;
Nguyen, Ky;
Dawodu, Tolulola;
Xu, Hua

Publication type:

journal article

Large language models in biomedicine and health: current research landscape and future directions.

Published in:

Journal of the American Medical Informatics Association, 2024, v. 31, n. 9, p. 1801, doi. 10.1093/jamia/ocae202

By:

Lu, Zhiyong;
Peng, Yifan;
Cohen, Trevor;
Ghassemi, Marzyeh;
Weng, Chunhua;
Tian, Shubo

Publication type:

Article

Large language models for biomedicine: foundations, opportunities, challenges, and best practices.

Published in:

Journal of the American Medical Informatics Association, 2024, v. 31, n. 9, p. 2114, doi. 10.1093/jamia/ocae074

By:

Sahoo, Satya S;
Plasek, Joseph M;
Xu, Hua;
Uzuner, Özlem;
Cohen, Trevor;
Yetisgen, Meliha;
Liu, Hongfang;
Meystre, Stéphane;
Wang, Yanshan

Publication type:

Article

From benchmark to bedside: transfer learning from social media to patient-provider text messages for suicide risk prediction.

Published in:

Journal of the American Medical Informatics Association, 2023, v. 30, n. 6, p. 1068, doi. 10.1093/jamia/ocad062

By:

Burkhardt, Hannah A;
Ding, Xiruo;
Kerbrat, Amanda;
Comtois, Katherine Anne;
Cohen, Trevor

Publication type:

Article

Cost-aware active learning for named entity recognition in clinical text.

Published in:

2019

By:

Wei, Qiang;
Chen, Yukun;
Salimi, Mandana;
Denny, Joshua C;
Mei, Qiaozhu;
Lasko, Thomas A;
Chen, Qingxia;
Wu, Stephen;
Franklin, Amy;
Cohen, Trevor;
Xu, Hua

Publication type:

journal article

Learning predictive models of drug side-effect relationships from distributed representations of literature-derived semantic predications.

Published in:

2018

By:

Mower, Justin;
Subramanian, Devika;
Cohen, Trevor

Publication type:

journal article

Pragmatics to Reveal Intent in Social Media Peer Interactions: Mixed Methods Study.

Published in:

2021

By:

Singh, Tavleen;
Olivares, Sofia;
Cohen, Trevor;
Cobb, Nathan;
Wang, Jing;
Franklin, Amy;
Myneni, Sahiti

Publication type:

journal article

Behavioral Activation and Depression Symptomatology: Longitudinal Assessment of Linguistic Indicators in Text-Based Therapy Sessions.

Published in:

2021

By:

Burkhardt, Hannah A;
Alexopoulos, George S;
Pullmann, Michael D;
Hull, Thomas D;
Areán, Patricia A;
Cohen, Trevor

Publication type:

journal article

Perceived Utility and Characterization of Personal Google Search Histories to Detect Data Patterns Proximal to a Suicide Attempt in Individuals Who Previously Attempted Suicide: Pilot Cohort Study.

Published in:

2021

By:

Areán, Patricia A;
Pratap, Abhishek;
Hsin, Honor;
Huppert, Tierney K;
Hendricks, Karin E;
Heagerty, Patrick J;
Cohen, Trevor;
Bagge, Courtney;
Comtois, Katherine Anne

Publication type:

journal article

Content-Sensitive Characterization of Peer Interactions of Highly Engaged Users in an Online Community for Smoking Cessation: Mixed-Methods Approach for Modeling User Engagement in Health Promotion Interventions.

Published in:

Journal of Participatory Medicine, 2018, v. 10, n. 3, p. N.PAG, doi. 10.2196/jopm.9745

By:

Myneni, Sahiti;
Sridharan, Vishnupriya;
Cobb, Nathan;
Cohen, Trevor

Publication type:

Article

Predicting decompression surgery by applying multimodal deep learning to patients' structured and unstructured health data.

Published in:

BMC Medical Informatics & Decision Making, 2023, v. 23, n. 1, p. 1, doi. 10.1186/s12911-022-02096-x

By:

Jujjavarapu, Chethan;
Suri, Pradeep;
Pejaver, Vikas;
Friedly, Janna;
Gold, Laura S.;
Meier, Eric;
Cohen, Trevor;
Mooney, Sean D.;
Heagerty, Patrick J.;
Jarvik, Jeffrey G.

Publication type:

Article

Lessons Learned From Interdisciplinary Efforts to Combat COVID-19 Misinformation: Development of Agile Integrative Methods From Behavioral Science, Data Science, and Implementation Science.

Published in:

JMIR Infodemiology, 2023, v. 3, n. 1, p. 1, doi. 10.2196/40156

By:

Myneni, Sahiti;
Cuccaro, Paula;
Montgomery, Sarah;
Pakanati, Vivek;
Tang, Jinni;
Singh, Tavleen;
Dominguez, Olivia;
Cohen, Trevor;
Reininger, Belinda;
Savas, Lara S;
Fernandez, Maria E

Publication type:

Article

Graph-based signal integration for high-throughput phenotyping.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 13, p. 1, doi. 10.1186/1471-2105-13-S13-S2

By:

Herskovic, Jorge R.;
Subramanian, Devika;
Cohen, Trevor;
Bozzo-Silva, Pamela A.;
Bearden, Charles F.;
Bernstam, Elmer V.

Publication type:

Article

Surgical resection of a subphrenic endometrial stromal sarcoma metastasis tethered to diaphragm and liver in a 28-year-old patient: a case report.

Published in:

2022

By:

Cadili, Lina;
Cohen, Trevor;
Ross, Alison Carol

Publication type:

Case Study

DataMed - an open source discovery index for finding biomedical datasets.

Published in:

2018

By:

Xiaoling Chen;
Gururaj, Anupama E.;
Ozyurt, Burak;
Ruiling Liu;
Soysal, Ergin;
Cohen, Trevor;
Tiryaki, Firat;
Yueling Li;
Nansu Zong;
Min Jiang;
Rogith, Deevakar;
Salimi, Mandana;
Hyeon-eui Kim;
Rocca-Serra, Philippe;
Gonzalez-Beltran, Alejandra;
Farcas, Claudiu;
Johnson, Todd;
Margolis, Ron;
Alter, George;
Sansone, Susanna-Assunta

Publication type:

journal article

Automated identification of molecular effects of drugs (AIMED).

Published in:

2016

By:

Fathiamini, Safa;
Johnson, Amber M.;
Jia Zeng;
Araya, Alejandro;
Holla, Vijaykumar;
Bailey, Ann M.;
Litzenburger, Beate C.;
Sanchez, Nora S.;
Khotskaya, Yekaterina;
Hua Xu;
Meric-Bernstam, Funda;
Bernstam, Elmer V.;
Cohen, Trevor;
Zeng, Jia;
Xu, Hua

Publication type:

journal article

Extracting genetic alteration information for personalized cancer therapy from ClinicalTrials.gov.

Published in:

2016

By:

Jun Xu;
Hee-Jin Lee;
Jia Zeng;
Yonghui Wu;
Yaoyun Zhang;
Liang-Chin Huang;
Johnson, Amber;
Holla, Vijaykumar;
Bailey, Ann M.;
Cohen, Trevor;
Meric-Bernstam, Funda;
Bernstam, Elmer V.;
Hua Xu;
Xu, Jun;
Lee, Hee-Jin;
Zeng, Jia;
Wu, Yonghui;
Zhang, Yaoyun;
Huang, Liang-Chin;
Xu, Hua

Publication type:

journal article

Predicting biomedical document access as a function of past use.

Published in:

Journal of the American Medical Informatics Association, 2012, v. 19, n. 3, p. 473, doi. 10.1136/amiajnl-2011-000325

By:

Goodwin, J. Caleb;
Johnson, Todd R.;
Cohen, Trevor;
Herskovic, Jorge R.;
Bernstam, Elmer V.

Publication type:

Article

Reevaluating recovery: perceived violations and preemptive interventions on emergency psychiatry rounds.

Published in:

2007

By:

Cohen T;
Blatter B;
Almeida C;
Patel VL;
Cohen, Trevor;
Blatter, Brett;
Almeida, Carlos;
Patel, Vimla L

Publication type:

journal article

Reevaluating Recovery: Perceived Violations and Preemptive Interventions on Emergency Psychiatry Rounds.

Published in:

Journal of the American Medical Informatics Association, 2007, v. 14, n. 3, p. 312, doi. 10.1197/jamia.M2245

By:

Cohen, Trevor;
Blatter, Brett;
Almeida, Carlos;
Patel, Vimla L.

Publication type:

Article

Excited-state dynamics of deuterated indigo.

Published in:

European Physical Journal D (EPJ D), 2023, v. 77, n. 9, p. 1, doi. 10.1140/epjd/s10053-023-00744-z

By:

Cohen, Trevor;
Svadlenak, Nathan;
Smith, Charles;
Vo, Krystal;
Lee, Si-Young;
Parejo-Vidal, Ana;
Kincaid, Joseph R. A.;
Sobolewski, Andrzej L.;
Rode, Michal F.;
de Vries, Mattanjah S.

Publication type:

Article

Intervention to Promote Communication About Goals of Care for Hospitalized Patients With Serious Illness: A Randomized Clinical Trial.

Published in:

JAMA: Journal of the American Medical Association, 2023, v. 329, n. 23, p. 2028, doi. 10.1001/jama.2023.8812

By:

Curtis, J. Randall;
Lee, Robert Y.;
Brumback, Lyndia C.;
Kross, Erin K.;
Downey, Lois;
Torrence, Janaki;
LeDuc, Nicole;
Mallon Andrews, Kasey;
Im, Jennifer;
Heywood, Joanna;
Brown, Crystal E.;
Sibley, James;
Lober, William B.;
Cohen, Trevor;
Weiner, Bryan J.;
Khandelwal, Nita;
Abedini, Nauzley C.;
Engelberg, Ruth A.

Publication type:

Article

A publicly available benchmark for biomedical dataset retrieval: the reference standard for the 2016 bioCADDIE dataset retrieval challenge.

Published in:

Database: The Journal of Biological Databases & Curation, 2017, v. 2017, n. 1, p. 1, doi. 10.1093/database/bax061

By:

Cohen, Trevor;
Roberts, Kirk;
Gururaj, Anupama E.;
Chen, Xiaoling;
Pournejati, Saeid;
Alter, George;
Hersh, William R.;
Demner-Fushman, Dina;
Ohno-Machado, Lucila;
Hua Xu

Publication type:

Article

Using Ontology Fingerprints to disambiguate gene name entities in the biomedical literature.

Published in:

Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav034

By:

Guocai Chen;
Jieyi Zhao;
Cohen, Trevor;
Cui Tao;
Jingchun Sun;
Hua Xu;
Bernstam, Elmer V.;
Lawson, Andrew;
Jia Zeng;
Johnson, Amber M.;
Holla, Vijaykumar;
Bailey, Ann M.;
Lara-Guerra, Humberto;
Litzenburger, Beate;
Meric-Bernstam, Funda;
Zheng, W. Jim

Publication type:

Article

The Role of the Fallopian Tube in Ovarian Cancer.

Published in:

Clinical Advances in Hematology & Oncology, 2012, v. 10, n. 5, p. 296

By:

Tone, Alicia A.;
Salvador, Shannon;
Finlayson, Sarah J.;
Tinker, Anna V.;
Kwon, Janice S.;
Cheng-Han Lee;
Cohen, Trevor;
Ehlen, Tom;
Lee, Marette;
Carey, Mark S.;
Heywood, Mark;
Pike, Judith;
Hoskins, Paul J.;
Stuart, Gavin C.;
Swenerton, Kenneth D.;
Huntsman, David G.;
Gilks, C. Blake;
Miller, Dianne M.;
McAlpine, Jessica N.

Publication type:

Article

Mobile RDoC: Using Smartphones to Understand the Relationship Between Auditory Verbal Hallucinations and Need for Care.

Published in:

Schizophrenia Bulletin Open, 2020, v. 2, n. 1, p. 1, doi. 10.1093/schizbullopen/sgaa060

By:

Ben-Zeev, Dror;
Buck, Benjamin;
Chander, Ayesha;
Brian, Rachel;
Wang, Weichen;
Atkins, David;
Brenner, Carolyn J.;
Cohen, Trevor;
Campbell, Andrew;
Munson, Jeffrey

Publication type:

Article

Assessment of Natural Language Processing of Electronic Health Records to Measure Goals-of-Care Discussions as a Clinical Trial Outcome.

Published in:

JAMA Network Open, 2023, v. 6, n. 2, p. e231204, doi. 10.1001/jamanetworkopen.2023.1204

By:

Lee, Robert Y.;
Kross, Erin K.;
Torrence, Janaki;
Li, Kevin S.;
Sibley, James;
Cohen, Trevor;
Lober, William B.;
Engelberg, Ruth A.;
Curtis, J. Randall

Publication type:

Article

Using Empirically Constructed Lexical Resources for Named Entity Recognition.

Published in:

Biomedical Informatics Insights, 2013, n. 6, p. 17, doi. 10.4137/BII.S11664

By:

Jonnalagadda, Siddhartha;
Cohen, Trevor;
Wu, Stephen;
Hongfang Liu;
Gonzalez, Graciela

Publication type:

Article

Thyroid Cancer Polygenic Risk Score Improves Classification of Thyroid Nodules as Benign or Malignant.

Published in:

Journal of Clinical Endocrinology & Metabolism, 2024, v. 109, n. 2, p. 402, doi. 10.1210/clinem/dgad530

By:

Pozdeyev, Nikita;
Dighe, Manjiri;
Barrio, Martin;
Raeburn, Christopher;
Smith, Harry;
Fisher, Matthew;
Chavan, Sameer;
Rafaels, Nicholas;
Shortt, Jonathan A;
Lin, Meng;
Leu, Michael G;
Clark, Toshimasa;
Marshall, Carrie;
Haugen, Bryan R;
Subramanian, Devika;
Crooks, Kristy;
Gignoux, Christopher;
Cohen, Trevor

Publication type:

Article