Works matching AU Clark, Andrew G.

Results: 242

Understanding the accuracy of statistical haplotype inference with sequence data of known phase.

Published in:

Genetic Epidemiology, 2007, v. 31, n. 7, p. 659, doi. 10.1002/gepi.20185

By:

Andrés, Aida M.;
Clark, Andrew G.;
Shimmin, Lawrence;
Boerwinkle, Eric;
Sing, Charles F.;
Hixson, James E.

Publication type:

Article

The role of haplotypes in candidate gene studies.

Published in:

Genetic Epidemiology, 2004, v. 27, n. 4, p. 321, doi. 10.1002/gepi.20025

By:

Andrew G. Clark

Publication type:

Article

Population genetic tools for dissecting innate immunity in humans.

Published in:

Nature Reviews Immunology, 2013, v. 13, n. 4, p. 280, doi. 10.1038/nri3421

By:

Quintana-Murci, Lluís;
Clark, Andrew G.

Publication type:

Article

Estimating the mutation load in human genomes.

Published in:

Nature Reviews Genetics, 2015, v. 16, n. 6, p. 333, doi. 10.1038/nrg3931

By:

Henn, Brenna M.;
Botigué, Laura R.;
Bustamante, Carlos D.;
Clark, Andrew G.;
Gravel, Simon

Publication type:

Article

Special Issue: Repetitive DNA Sequences.

Published in:

2019

By:

Lower, Sarah E.;
Dion-Côté, Anne-Marie;
Clark, Andrew G.;
Barbash, Daniel A.

Publication type:

Editorial

Analyses of X-linked and autosomal genetic variation in population-scale whole genome sequencing.

Published in:

Nature Genetics, 2011, v. 43, n. 8, p. 741, doi. 10.1038/ng.877

By:

Gottipati, Srikanth;
Arbiza, Leonardo;
Siepel, Adam;
Clark, Andrew G.;
Keinan, Alon

Publication type:

Article

Regulatory changes underlying expression differences within and between Drosophila species.

Published in:

Nature Genetics, 2008, v. 40, n. 3, p. 346, doi. 10.1038/ng.77

By:

Wittkopp, Patricia J;
Haerum, Belinda K;
Clark, Andrew G

Publication type:

Article

Dynamic evolution of the innate immune system in Drosophila.

Published in:

Nature Genetics, 2007, v. 39, n. 12, p. 1461, doi. 10.1038/ng.2007.60

By:

Sackton, Timothy B.;
Lazzaro, Brian P.;
Schlenke, Todd A.;
Evans, Jay D.;
Hultmark, Dan;
Clark, Andrew G.

Publication type:

Article

Conjuring SNPs to detect associations.

Published in:

Nature Genetics, 2007, v. 39, n. 7, p. 815, doi. 10.1038/ng0707-815

By:

Clark, Andrew G.;
Jian Li

Publication type:

Article

Hot spots unglued.

Published in:

Nature Genetics, 2005, v. 37, n. 6, p. 563, doi. 10.1038/ng0605-563

By:

Clark, Andrew G.

Publication type:

Article

Chips for chimps.

Published in:

Nature Genetics, 1999, v. 22, n. 2, p. 119, doi. 10.1038/9619

By:

Clark, Andrew G

Publication type:

Article

Sequence variation in the human angiotensin converting enzyme.

Published in:

Nature Genetics, 1999, v. 22, n. 1, p. 59, doi. 10.1038/8760

By:

Rieder, Mark J.;
Taylor, Scott L.;
Clark, Andrew G.;
Nickerson, Deborah A.

Publication type:

Article

DNA sequence diversity in a 9.7-kb region of the human lipoprotein lipase gene.

Published in:

Nature Genetics, 1998, v. 19, n. 3, p. 233, doi. 10.1038/907

By:

Nickerson, Deborah A.;
Taylor, Scott L.;
Weiss, Kenneth M.;
Clark, Andrew G.;
Hutchinson, Richard G.;
Stengård, Jari;
Salomaa, Veikko;
Vartiainen, Erkki;
Boerwinkle, Eric;
Sing, Charles F.

Publication type:

Article

Identification of avian W-linked contigs by short-read sequencing.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 183, doi. 10.1186/1471-2164-13-183

By:

Chen, Nancy;
Bellott, Daniel W.;
Page, David C.;
Clark, Andrew G.

Publication type:

Article

Comparative profiling of the transcriptional response to infection intwo species of Drosophila by short-read cDNA sequencing.

Published in:

BMC Genomics, 2009, v. 10, p. 259, doi. 10.1186/1471-2164-10-259

By:

Sackton, Timothy B.;
Clark, Andrew G.

Publication type:

Article

Contrasting Infection Strategies in Generalist and Specialist Wasp Parasitoids of Drosophila melanogaster.

Published in:

PLoS Pathogens, 2007, v. 3, n. 10, p. e158, doi. 10.1371/journal.ppat.0030158

By:

Schlenke, Todd A.;
Morales, Jorge;
Govind, Shubha;
Clark, Andrew G.

Publication type:

Article

Population Genetic Aspects of Gametophytic Self- incompatibility.

Published in:

Plant Species Biology, 1996, v. 11, n. 1, p. 13, doi. 10.1111/j.1442-1984.1996.tb00104.x

By:

Clark, Andrew G.

Publication type:

Article

Collective effects of human genomic variation on microbiome function.

Published in:

Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-07632-3

By:

New, Felicia N.;
Baer, Benjamin R.;
Clark, Andrew G.;
Wells, Martin T.;
Brito, Ilana L.

Publication type:

Article

Association of mitochondrial DNA content, heteroplasmies and inter-generational transmission with autism.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-30805-7

By:

Wang, Yiqin;
Guo, Xiaoxian;
Hong, Xiumei;
Wang, Guoying;
Pearson, Colleen;
Zuckerman, Barry;
Clark, Andrew G.;
O'Brien, Kimberly O.;
Wang, Xiaobin;
Gu, Zhenglong

Publication type:

Article

The genetic architecture of DNA replication timing in human pluripotent stem cells.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-27115-9

By:

Ding, Qiliang;
Edwards, Matthew M.;
Wang, Ning;
Zhu, Xiang;
Bracci, Alexa N.;
Hulke, Michelle L.;
Hu, Ya;
Tong, Yao;
Hsiao, Joyce;
Charvet, Christine J.;
Ghosh, Sulagna;
Handsaker, Robert E.;
Eggan, Kevin;
Merkle, Florian T.;
Gerhardt, Jeannine;
Egli, Dieter;
Clark, Andrew G.;
Koren, Amnon

Publication type:

Article

Extent of myosin penetration within the actin cortex regulates cell surface mechanics.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-26611-2

By:

Truong Quang, Binh An;
Peters, Ruby;
Cassani, Davide A. D.;
Chugh, Priyamvada;
Clark, Andrew G.;
Agnew, Meghan;
Charras, Guillaume;
Paluch, Ewa K.

Publication type:

Article

Induction of Excessive Endoplasmic Reticulum Stress in the Drosophila Male Accessory Gland Results in Infertility.

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0119386

By:

Chow, Clement Y.;
Avila, Frank W.;
Clark, Andrew G.;
Wolfner, Mariana F.

Publication type:

Article

Population Genomic Analysis of 962 Whole Genome Sequences of Humans Reveals Natural Selection in Non-Coding Regions.

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0121644

By:

Yu, Fuli;
Lu, Jian;
Liu, Xiaoming;
Gazave, Elodie;
Chang, Diana;
Raj, Srilakshmi;
Hunter-Zinck, Haley;
Blekhman, Ran;
Arbiza, Leonardo;
Van Hout, Cris;
Morrison, Alanna;
Johnson, Andrew D.;
Bis, Joshua;
Cupples, L. Adrienne;
Psaty, Bruce M.;
Muzny, Donna;
Yu, Jin;
Gibbs, Richard A.;
Keinan, Alon;
Clark, Andrew G.

Publication type:

Article

Characterizing the Infection-Induced Transcriptome of <i>Nasonia vitripennis</i> Reveals a Preponderance of Taxonomically-Restricted Immune Genes.

Published in:

PLoS ONE, 2013, v. 8, n. 12, p. 1, doi. 10.1371/journal.pone.0083984

By:

Sackton, Timothy B.;
Werren, John H.;
Clark, Andrew G.

Publication type:

Article

Heritability and Inter-Population Differences in Lipid Profiles of <i>Drosophila melanogaster</i>.

Published in:

PLoS ONE, 2013, v. 8, n. 8, p. 1, doi. 10.1371/journal.pone.0072726

By:

Scheitz, Cornelia J. F.;
Guo, Yu;
Early, Angela M.;
Harshman, Lawrence G.;
Clark, Andrew G.

Publication type:

Article

Transcriptome-Wide Identification of Novel Imprinted Genes in Neonatal Mouse Brain.

Published in:

PLoS ONE, 2008, v. 3, n. 12, p. 1, doi. 10.1371/journal.pone.0003839

By:

Xu Wang;
Qi Sun;
McGrath, Sean D.;
Mardis, Elaine R.;
Soloway, Paul D.;
Clark, Andrew G.

Publication type:

Article

Dynamics of reduced genetic diversity in increasingly fragmented populations of Florida scrub jays,Aphelocoma coerulescens.

Published in:

Evolutionary Applications, 2022, v. 15, n. 6, p. 1018, doi. 10.1111/eva.13421

By:

Nguyen, Tram N.;
Chen, Nancy;
Cosgrove, Elissa J.;
Bowman, Reed;
Fitzpatrick, John W.;
Clark, Andrew G.

Publication type:

Article

Design and analysis of CRISPR‐based underdominance toxin‐antidote gene drives.

Published in:

Evolutionary Applications, 2021, v. 14, n. 4, p. 1052, doi. 10.1111/eva.13180

By:

Champer, Jackson;
Champer, Samuel E.;
Kim, Isabel K.;
Clark, Andrew G.;
Messer, Philipp W.

Publication type:

Article

Environmental and genetic perturbations reveal different networks of metabolic regulation.

Published in:

Molecular Systems Biology, 2011, v. 7, n. 1, p. 1, doi. 10.1038/msb.2011.96

By:

Greenberg, Anthony J;
Hackett, Sean R;
Harshman, Lawrence G;
Clark, Andrew G

Publication type:

Article

Hypothalamic transcriptome of tame and aggressive silver foxes (Vulpes vulpes) identifies gene expression differences shared across brain regions.

Published in:

Genes, Brain & Behavior, 2020, v. 19, n. 1, p. N.PAG, doi. 10.1111/gbb.12614

By:

Rosenfeld, Cheryl S.;
Hekman, Jessica P.;
Johnson, Jennifer L.;
Lyu, Zhen;
Ortega, Madison T.;
Joshi, Trupti;
Mao, Jiude;
Vladimirova, Anastasiya V.;
Gulevich, Rimma G.;
Kharlamova, Anastasiya V.;
Acland, Gregory M.;
Hecht, Erin E.;
Wang, Xu;
Clark, Andrew G.;
Trut, Lyudmila N.;
Behura, Susanta K.;
Kukekova, Anna V.

Publication type:

Article

UCSF Increases Consumer Value Through Optimal Vendor-Show Scheduling.

Published in:

Interfaces, 2011, v. 41, n. 4, p. 327, doi. 10.1287/inte.1110.0568

By:

Clark, Andrew G.;
Cholette, Susan;
Ozluk, Ozgur

Publication type:

Article

Suppression gene drive in continuous space can result in unstable persistence of both drive and wild‐type alleles.

Published in:

Molecular Ecology, 2021, v. 30, n. 4, p. 1086, doi. 10.1111/mec.15788

By:

Champer, Jackson;
Kim, Isabel K.;
Champer, Samuel E.;
Clark, Andrew G.;
Messer, Philipp W.

Publication type:

Article

Monophyly of Wolbachia pipientis genomes within Drosophila melanogaster: geographic structuring, titre variation and host effects across five populations.

Published in:

Molecular Ecology, 2013, v. 22, n. 23, p. 5765, doi. 10.1111/mec.12530

By:

Early, Angela M.;
Clark, Andrew G.

Publication type:

Article

Natural genetic variation in male reproductive genes contributes to nontransitivity of sperm competitive ability in Drosophila melanogaster.

Published in:

Molecular Ecology, 2013, v. 22, n. 5, p. 1400, doi. 10.1111/mec.12113

By:

Zhang, Rui;
Clark, Andrew G.;
Fiumera, Anthony C.

Publication type:

Article

Female influence on pre- and post-copulatory sexual selection and its genetic basis in Drosophila melanogaster.

Published in:

Molecular Ecology, 2011, v. 20, n. 19, p. 4098, doi. 10.1111/j.1365-294X.2011.05253.x

By:

GIARDINA, THOMAS J.;
BEAVIS, ANNA;
CLARK, ANDREW G.;
FIUMERA, ANTHONY C.

Publication type:

Article

Candidate genetic modifiers of retinitis pigmentosa identified by exploiting natural variation in Drosophila.

Published in:

Human Molecular Genetics, 2016, v. 25, n. 4, p. 651, doi. 10.1093/hmg/ddv502

By:

Chow, Clement Y.;
Kelsey, Keegan J. P.;
Wolfner, Mariana F.;
Clark, Andrew G.

Publication type:

Article

Dense time-course gene expression profiling of the Drosophila melanogaster innate immune response.

Published in:

BMC Genomics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12864-021-07593-3

By:

Schlamp, Florencia;
Delbare, Sofie Y. N.;
Early, Angela M.;
Wells, Martin T.;
Basu, Sumanta;
Clark, Andrew G.

Publication type:

Article

The evolutionary arms race between transposable elements and piRNAs in Drosophila melanogaster.

Published in:

BMC Evolutionary Biology, 2020, v. 20, n. 1, p. 1, doi. 10.1186/s12862-020-1580-3

By:

Luo, Shiqi;
Zhang, Hong;
Duan, Yuange;
Yao, Xinmin;
Clark, Andrew G.;
Lu, Jian

Publication type:

Article

Allele-Specific Transcriptome and Methylome Analysis Reveals Stable Inheritance and Cis-Regulation of DNA Methylation in Nasonia.

Published in:

PLoS Biology, 2016, v. 14, n. 7, p. 1, doi. 10.1371/journal.pbio.1002500

By:

Wang, Xu;
Werren, John H.;
Clark, Andrew G.

Publication type:

Article

Overexpression of a glutathione S‐transferase (Mdgst) and a galactosyltransferase‐like gene (Mdgt1) is responsible for imidacloprid resistance in house flies.

Published in:

Pest Management Science, 2019, v. 75, n. 1, p. 37, doi. 10.1002/ps.5125

By:

Reid, William R;
Sun, Haina;
Becnel, James J;
Clark, Andrew G;
Scott, Jeffrey G

Publication type:

Article

The effects of scale: variation in the APOA1/C3/A4/A5 gene cluster.

Published in:

Human Genetics, 2004, v. 115, n. 1, p. 36, doi. 10.1007/s00439-004-1106-x

By:

Fullerton, Stephanie M.;
Buchanan, Anne V.;
Sonpar, Vibhor A.;
Taylor, Scott L.;
Smith, Joshua D.;
Carlson, Christopher S.;
Salomaa, Veikko;
Stengård, Jari H.;
Boerwinkle, Eric;
Clark, Andrew G.;
Nickerson, Deborah A.;
Weiss, Kenneth M.

Publication type:

Article

Sequence polymorphism at the human apolipoprotein AII gene (APOA2): unexpected deficit of variation in an African-American sample.

Published in:

2002

By:

Fullerton, Stephanie M.;
Clark, Andrew G.;
Weiss, Kenneth M.;
Taylor, Scott L.;
Stengård, Jari H.;
Salomaa, Veikko;
Boerwinkle, Eric;
Nickerson, Deborah A.

Publication type:

Erratum

Sequence polymorphism at the human apolipoprotein AII gene (APOA2): unexpected deficit of variation in an African-American sample.

Published in:

Human Genetics, 2002, v. 111, n. 1, p. 75, doi. 10.1007/s00439-002-0763-x

By:

Fullerton, Stephanie M.;
Clark, Andrew G.;
Weiss, Kenneth M.;
Taylor, Scott L.;
Stengård, Jari H.;
Salomaa, Veikko;
Boerwinkle, Eric;
Nickerson, Deborah A.

Publication type:

Article

Roles of Female and Male Genotype in Post-Mating Responses in Drosophila melanogaster.

Published in:

Journal of Heredity, 2017, v. 108, n. 7, p. 740, doi. 10.1093/jhered/esx081

By:

Delbare, Sofie Y. N.;
Chow, Clement Y.;
Wolfner, Mariana F.;
Clark, Andrew G.

Publication type:

Article

Characterizing Male-Female Interactions Using Natural Genetic Variation in Drosophila melanogaster.

Published in:

Journal of Heredity, 2015, v. 106, n. 1, p. 67, doi. 10.1093/jhered/esu076

By:

REINHART, MICHAEL;
CARNEY, TARA;
CLARK, ANDREW G.;
FIUMERA, ANTHONY C.

Publication type:

Article

Three recent sex chromosome-to-autosome fusions in a Drosophila virilis strain with high satellite DNA content.

Published in:

Genetics, 2023, v. 224, n. 2, p. 1, doi. 10.1093/genetics/iyad062

By:

Flynn, Jullien M.;
Hu, Kevin B.;
Clark, Andrew G.

Publication type:

Article

Octopaminergic/tyraminergic Tdc2 neurons regulate biased sperm usage in female Drosophila melanogaster.

Published in:

Genetics, 2022, v. 221, n. 4, p. 1, doi. 10.1093/genetics/iyac096

By:

Chen, Dawn S.;
Clark, Andrew G.;
Wolfner, Mariana F.

Publication type:

Article

Dissecting Fertility Functions of Drosophila Y Chromosome Genes with CRISPR.

Published in:

Genetics, 2020, v. 214, n. 4, p. 977, doi. 10.1534/genetics.120.302672

By:

Hafezi, Yassi;
Sruba, Samantha R.;
Tarrash, Steven R.;
Wolfner, Mariana F.;
Clark, Andrew G.

Publication type:

Article

Female Genetic Contributions to Sperm Competition in Drosophila melanogaster.

Published in:

Genetics, 2019, v. 212, n. 3, p. 789, doi. 10.1534/genetics.119.302284

By:

Chen, Dawn S.;
Delbare, Sofie Y. N.;
White, Simone L.;
Sitnik, Jessica;
Chatterjee, Martik;
DoBell, Elizabeth;
Weiss, Orli;
Clark, Andrew G.;
Wolfner, Mariana F.

Publication type:

Article

CRISPR Gene Drive Efficiency and Resistance Rate Is Highly Heritable with No Common Genetic Loci of Large Effect.

Published in:

Genetics, 2019, v. 212, n. 1, p. 333, doi. 10.1534/genetics.119.302037

By:

Messer, Philipp W.;
Champer, Jackson;
Zhaoxin Wen;
Luthra, Anisha;
Reeves, Riona;
Joan Chung;
Chen Liu;
Yoo Lim Lee;
Jingxian Liu;
Emily Yang;
Clark, Andrew G.

Publication type:

Article