Works by Chun, Jongsik
Results: 77
Comparative Genomic and Phylogenomic Analyses Clarify Relationships Within and Between Bacillus cereus and Bacillus thuringiensis : Proposal for the Recognition of Two Bacillus thuringiensis Genomovars.
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- Frontiers in Microbiology, 2019, p. 1, doi. 10.3389/fmicb.2019.01978
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- Article
Large-Scale Genomics Reveals the Genetic Characteristics of Seven Species and Importance of Phylogenetic Distance for Estimating Pan-Genome Size.
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- Frontiers in Microbiology, 2019, p. N.PAG, doi. 10.3389/fmicb.2019.00834
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- Article
Genomic Insight Into the Predominance of Candidate Phylum Atribacteria JS1 Lineage in Marine Sediments.
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- Frontiers in Microbiology, 2018, p. N.PAG, doi. 10.3389/fmicb.2018.02909
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- Article
The pre-seventh pandemic Vibrio cholerae BX 330286 El Tor genome: evidence for the environment as a genome reservoir.
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- Environmental Microbiology Reports, 2010, v. 2, n. 1, p. 208, doi. 10.1111/j.1758-2229.2010.00141.x
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- Article
Identification of Household Bacterial Community and Analysis of Species Shared with Human Microbiome.
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- Current Microbiology, 2013, v. 67, n. 5, p. 557, doi. 10.1007/s00284-013-0401-y
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- Article
VicPred: A Vibrio cholerae Genotype Prediction Tool.
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- Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.691895
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- Article
Lacinutrix jangbogonensis sp. nov., a psychrophilic bacterium isolated from Antarctic marine sediment and emended description of the genus Lacinutrix.
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- Antonie van Leeuwenhoek, 2014, v. 106, n. 3, p. 527, doi. 10.1007/s10482-014-0221-5
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- Article
Spatial Scaling Effects on Soil Bacterial Communities in Malaysian Tropical Forests.
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- Microbial Ecology, 2014, v. 68, n. 2, p. 247, doi. 10.1007/s00248-014-0404-7
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Tropical Soil Bacterial Communities in Malaysia: pH Dominates in the Equatorial Tropics Too.
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- Microbial Ecology, 2012, v. 64, n. 2, p. 474, doi. 10.1007/s00248-012-0028-8
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- Article
Distinctive Phyllosphere Bacterial Communities in Tropical Trees.
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- Microbial Ecology, 2012, v. 63, n. 3, p. 674, doi. 10.1007/s00248-011-9953-1
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A Hump-Backed Trend in Bacterial Diversity with Elevation on Mount Fuji, Japan.
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- Microbial Ecology, 2012, v. 63, n. 2, p. 429, doi. 10.1007/s00248-011-9900-1
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- Article
Evidence for several waves of global transmission in the seventh cholera pandemic.
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- Nature, 2011, v. 477, n. 7365, p. 462, doi. 10.1038/nature10392
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- Article
Comparison of a culture-based and a PCR-based methods for estimating bacterial abundance on eggshells, with comments on statistical analyses.
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- Journal of Field Ornithology, 2013, v. 84, n. 3, p. 304, doi. 10.1111/jofo.12031
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- Article
Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains.
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- PLoS Biology, 2014, v. 12, n. 8, p. 1, doi. 10.1371/journal.pbio.1001920
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- Article
Improved Metagenomic Taxonomic Profiling Using a Curated Core Gene-Based Bacterial Database Reveals Unrecognized Species in the Genus Streptococcus.
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- Pathogens, 2020, v. 9, n. 3, p. 204, doi. 10.3390/pathogens9030204
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- Article
VCGIDB: A Database and Web Resource for the Genomic Islands from Vibrio cholerae.
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- Pathogens, 2019, v. 8, n. 4, p. 261, doi. 10.3390/pathogens8040261
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Changes in the Intestinal Microbiota of Patients with Inflammatory Bowel Disease with Clinical Remission during an 8-Week Infliximab Infusion Cycle.
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- Microorganisms, 2020, v. 8, n. 6, p. 874, doi. 10.3390/microorganisms8060874
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Introducing Murine Microbiome Database (MMDB): A Curated Database with Taxonomic Profiling of the Healthy Mouse Gastrointestinal Microbiome.
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- Microorganisms, 2019, v. 7, n. 11, p. 480, doi. 10.3390/microorganisms7110480
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- Article
Toll-like receptor 9 mediates oral bacteria-induced IL-8 expression in gingival epithelial cells.
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- Immunology & Cell Biology, 2012, v. 90, n. 6, p. 655, doi. 10.1038/icb.2011.85
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Compositional Changes in the Gut Microbiota of Responders and Non-responders to Probiotic Treatment Among Patients With Diarrhea-predominant Irritable Bowel Syndrome: A Post Hoc Analysis of a Randomized Clinical Trial.
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- Journal of Neurogastroenterology & Motility, 2022, v. 28, n. 4, p. 642, doi. 10.5056/jnm21202
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A single gene of a commensal microbe affects host susceptibility to enteric infection.
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- Nature Communications, 2016, v. 7, n. 5, p. 11606, doi. 10.1038/ncomms11606
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Telomere maintenance through recruitment of internal genomic regions.
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- Nature Communications, 2015, v. 6, n. 9, p. 8189, doi. 10.1038/ncomms9189
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- Article
Metagenomic Insights into the Bioaerosols in the Indoor and Outdoor Environments of Childcare Facilities.
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- PLoS ONE, 2015, v. 10, n. 5, p. 1, doi. 10.1371/journal.pone.0126960
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- Article
Comparative genomic analysis reveals evidence of two novel Vibrio species closely related to V. cholerae.
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- BMC Microbiology, 2010, v. 10, p. 154, doi. 10.1186/1471-2180-10-154
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The analysis of oral microbial communities of wild-type and toll-like receptor 2-deficient mice using a 454 GS FLX Titanium pyrosequencer.
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- BMC Microbiology, 2010, v. 10, p. 101, doi. 10.1186/1471-2180-10-101
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Altered gut microbiome in convalescent patients with coronavirus disease 2019.
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- Frontiers in Cellular & Infection Microbiology, 2024, p. 1, doi. 10.3389/fcimb.2024.1455295
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Genomic analysis of a novel integrative conjugative element in Vibrio cholerae
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- FEBS Letters, 2009, v. 583, n. 22, p. 3630, doi. 10.1016/j.febslet.2009.10.041
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- Article
Bacterial community of sediments from the Australian-Antarctic ridge.
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- Polar Biology, 2014, v. 37, n. 4, p. 587, doi. 10.1007/s00300-014-1467-0
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Current Status and Future Promise of the Human Microbiome.
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- Pediatric Gastroenterology, Hepatology & Nutrition, 2013, v. 16, n. 2, p. 71, doi. 10.5223/pghn.2013.16.2.71
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Distinct Cutibacterium acnes subspecies defendens strains classified by multi-omics dissection alleviate inflammatory skin lesions of a rosacea-like mouse model.
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- Frontiers in Microbiomes, 2024, p. 1, doi. 10.3389/frmbi.2024.1362408
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Phylogeny Trumps Chemotaxonomy: A Case Study Involving Turicella otitidis.
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- Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.00834
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Erratum to: UBCG2: Up-to-Date Bacterial Core Genes and Pipeline for Phylogenomic Analysis.
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- 2023
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- Correction Notice
Erratum to: Introducing EzAAI: A Pipeline for High Throughput Calculations of Prokaryotic Average Amino Acid Identity.
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- 2023
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- Correction Notice
UACG: Up-to-Date Archaeal Core Genes and Software for Phylogenomic Tree Reconstruction.
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- Journal of Microbiology, 2023, v. 61, n. 7, p. 683, doi. 10.1007/s12275-023-00064-2
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Proposal of a health gut microbiome index based on a meta-analysis of Korean and global population datasets.
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- Journal of Microbiology, 2022, v. 60, n. 5, p. 533, doi. 10.1007/s12275-022-1526-0
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UBCG2: Up-to-date bacterial core genes and pipeline for phylogenomic analysis.
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- Journal of Microbiology, 2021, v. 59, n. 6, p. 609, doi. 10.1007/s12275-021-1231-4
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Introducing EzAAI: a pipeline for high throughput calculations of prokaryotic average amino acid identity.
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- Journal of Microbiology, 2021, v. 59, n. 5, p. 476, doi. 10.1007/s12275-021-1154-0
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UBCG: Up-to-date bacterial core gene set and pipeline for phylogenomic tree reconstruction.
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- Journal of Microbiology, 2018, v. 56, n. 4, p. 281, doi. 10.1007/s12275-018-8014-6
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Vertical distribution of bacterial community is associated with the degree of soil organic matter decomposition in the active layer of moist acidic tundra.
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- Journal of Microbiology, 2016, v. 54, n. 11, p. 713, doi. 10.1007/s12275-016-6294-2
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Improved pipeline for reducing erroneous identification by 16S rRNA sequences using the Illumina MiSeq platform.
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- Journal of Microbiology, 2015, v. 53, n. 1, p. 60, doi. 10.1007/s12275-015-4601-y
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- Article
TBC: A clustering algorithm based on prokaryotic taxonomy.
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- Journal of Microbiology, 2012, v. 50, n. 2, p. 181, doi. 10.1007/s12275-012-1214-6
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- Article
Comparative approach to capture bacterial diversity of coastal waters.
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- Journal of Microbiology, 2011, v. 49, n. 5, p. 729, doi. 10.1007/s12275-011-1205-z
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rRNASelector: A computer program for selecting ribosomal RNA encoding sequences from metagenomic and metatranscriptomic shotgun libraries.
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- Journal of Microbiology, 2011, v. 49, n. 4, p. 689, doi. 10.1007/s12275-011-1213-z
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- Article
Assessment of soil fungal communities using pyrosequencing.
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- Journal of Microbiology, 2010, v. 48, n. 3, p. 284, doi. 10.1007/s12275-010-9369-5
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Designing primers from multiple sequences using matchup program to improve detection of hepatitis B virus by polymerase chain reaction.
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- Journal of Microbiology, 2010, v. 48, n. 1, p. 111, doi. 10.1007/s12275-009-0282-8
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Classification of hybrid and altered Vibrio cholerae strains by CTX prophage and RS1 element structure.
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- Journal of Microbiology, 2009, v. 47, n. 6, p. 783, doi. 10.1007/s12275-009-0292-6
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Identification and characterization of metagenomic fragments from tidal flat sediment.
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- Journal of Microbiology, 2009, v. 47, n. 4, p. 402, doi. 10.1007/s12275-009-0099-5
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Diversity of bacterial community in freshwater of Woopo wetland.
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- Journal of Microbiology, 2008, v. 46, n. 6, p. 647, doi. 10.1007/s12275-008-0135-x
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Rapid phylogenetic dissection of prokaryotic community structure in tidal flat using pyrosequencing.
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- Journal of Microbiology, 2008, v. 46, n. 4, p. 357, doi. 10.1007/s12275-008-0071-9
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Genome insights into the pharmaceutical and plant growth promoting features of the novel species Nocardia alni sp. nov.
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- BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-021-08257-y
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