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Network Biology-Inspired Machine Learning Features Predict Cancer Gene Targets and Reveal Target Coordinating Mechanisms.
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- Pharmaceuticals (14248247), 2023, v. 16, n. 5, p. 752, doi. 10.3390/ph16050752
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- Article
Neuroblastoma, a Paradigm for Big Data Science in Pediatric Oncology.
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- International Journal of Molecular Sciences, 2017, v. 18, n. 1, p. 37, doi. 10.3390/ijms18010037
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- Article
A Knowledge-Based Discovery Approach Couples Artificial Neural Networks With Weight Engineering to Uncover Immune-Related Processes Underpinning Clinical Traits of Breast Cancer.
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- Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.920669
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- Article
NetDecoder: a network biology platform that decodes context-specific biological networks and gene activities.
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- Nucleic Acids Research, 2016, v. 44, n. 10, p. e100, doi. 10.1093/nar/gkw166
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- Article
A network-based phenotype mapping approach to identify genes that modulate drug response phenotypes.
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- Scientific Reports, 2016, p. 37003, doi. 10.1038/srep37003
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- Article
Inverted Expression Profiles of Sex-Biased Genes in Response to Toxicant Perturbations and Diseases.
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- PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0056668
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- Article
Toxicogenomic Analysis Suggests Chemical-Induced Sexual Dimorphism in the Expression of Metabolic Genes in Zebrafish Liver.
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- PLoS ONE, 2012, v. 7, n. 12, p. 1, doi. 10.1371/journal.pone.0051971
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- Article
Toxicogenomic and Phenotypic Analyses of Bisphenol-A Early-Life Exposure Toxicity in Zebrafish.
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- PLoS ONE, 2011, v. 6, n. 12, p. 1, doi. 10.1371/journal.pone.0028273
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- Article
Existence of Inverted Profile in Chemically Responsive Molecular Pathways in the Zebrafish Liver.
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- PLoS ONE, 2011, v. 6, n. 11, p. 1, doi. 10.1371/journal.pone.0027819
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- Article
SPIN-AI: A Deep Learning Model That Identifies Spatially Predictive Genes.
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- Biomolecules (2218-273X), 2023, v. 13, n. 6, p. 895, doi. 10.3390/biom13060895
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- Article
The Rise of Hypothesis-Driven Artificial Intelligence in Oncology.
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- Cancers, 2024, v. 16, n. 4, p. 822, doi. 10.3390/cancers16040822
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- Article
The evolutionary strata of DARPP-32 tail implicates hierarchical functional expansion in higher vertebrates.
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- Journal of Biosciences, 2014, v. 39, n. 3, p. 493, doi. 10.1007/s12038-014-9438-8
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- Article
Modular network mechanism of CCN1-associated resistance to HSV-1-derived oncolytic immunovirotherapies for glioblastomas.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-90718-1
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- Article
Regulostat Inferelator: a novel network biology platform to uncover molecular devices that predetermine cellular response phenotypes.
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- Nucleic Acids Research, 2019, v. 47, n. 14, p. e82, doi. 10.1093/nar/gkz417
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- Article
Simulation of the regulation of EGFR endocytosis and EGFR-ERK signaling by endophilin-mediated RhoA-EGFR crosstalk
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- FEBS Letters, 2008, v. 582, n. 15, p. 2283, doi. 10.1016/j.febslet.2008.05.026
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- Article
Pathway Sensitivity Analysis for Detecting Pro-Proliferation Activities of Oncogenes and Tumor Suppressors of Epidermal Growth Factor Receptor- Extracellular Signal-Regulated Protein Kinase Pathway at Altered Protein Levels.
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- Cancer (0008543X), 2009, v. 115, n. 18, p. 4246, doi. 10.1002/cncr.24485
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- Article
The Trifecta of Single-Cell, Systems-Biology, and Machine-Learning Approaches.
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- Genes, 2021, v. 12, n. 7, p. 1098, doi. 10.3390/genes12071098
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- Article
Vertical Transmission of SARS-CoV-2–Specific Antibodies and Cytokine Profiles in Pregnancy.
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- Journal of Infectious Diseases, 2024, v. 229, n. 2, p. 473, doi. 10.1093/infdis/jiad399
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- Article
Mercury-induced hepatotoxicity in zebrafish: in vivo mechanistic insights from transcriptome analysis, phenotype anchoring and targeted gene expression validation.
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- BMC Genomics, 2010, v. 11, p. 212, doi. 10.1186/1471-2164-11-212
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- Article
Simulation of crosstalk between small GTPase RhoA and EGFR-ERK signaling pathway via MEKK1.
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- Bioinformatics, 2009, v. 25, n. 3, p. 358, doi. 10.1093/bioinformatics/btn635
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- Article