Found: 6

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  • Epimetheus - a multi-profile normalizer for epigenomic sequencing data.

    Published in:
    BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1655-3
    By:
    • Saleem, Mohamed-Ashick M.;
    • Mendoza-Parra, Marco-Antonio;
    • Cholley, Pierre-Etienne;
    • Blum, Matthias;
    • Gronemeyer, Hinrich
    Publication type:
    Article

  • Adaptation in Toxic Environments: Arsenic Genomic Islands in the Bacterial Genus Thiomonas.

    Published in:
    PLoS ONE, 2015, v. 10, n. 10, p. 1, doi. 10.1371/journal.pone.0139011
    By:
    • Freel, Kelle C.;
    • Krueger, Martin C.;
    • Farasin, Julien;
    • Brochier-Armanet, Céline;
    • Barbe, Valérie;
    • Andrès, Jeremy;
    • Cholley, Pierre-Etienne;
    • Dillies, Marie-Agnès;
    • Jagla, Bernd;
    • Koechler, Sandrine;
    • Leva, Yann;
    • Magdelenat, Ghislaine;
    • Plewniak, Frédéric;
    • Proux, Caroline;
    • Coppée, Jean-Yves;
    • Bertin, Philippe N.;
    • Heipieper, Hermann J.;
    • Arsène-Ploetze, Florence
    Publication type:
    Article

  • LOGIQA: a database dedicated to long-range genome interactions quality assessment.

    Published in:
    BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2642-1
    By:
    • Mendoza-Parra, Marco-Antonio;
    • Blum, Matthias;
    • Malysheva, Valeriya;
    • Cholley, Pierre-Etienne;
    • Gronemeyer, Hinrich
    Publication type:
    Article

  • Modeling gene-regulatory networks to describe cell fate transitions and predict master regulators.

    Published in:
    NPJ Systems Biology & Applications, 2018, v. 4, n. 1, p. N.PAG, doi. 10.1038/s41540-018-0066-z
    By:
    • Cholley, Pierre-Etienne;
    • Moehlin, Julien;
    • Rohmer, Alexia;
    • Zilliox, Vincent;
    • Nicaise, Samuel;
    • Gronemeyer, Hinrich;
    • Mendoza-Parra, Marco Antonio
    Publication type:
    Article

  • An atlas of human metabolism.

    Published in:
    Science Signaling, 2020, v. 13, n. 624, p. 1, doi. 10.1126/scisignal.aaz1482
    By:
    • Robinson, Jonathan L.;
    • Kocabaş, Pınar;
    • Wang, Hao;
    • Cholley, Pierre-Etienne;
    • Cook, Daniel;
    • Nilsson, Avlant;
    • Anton, Mihail;
    • Ferreira, Raphael;
    • Domenzain, Iván;
    • Billa, Virinchi;
    • Limeta, Angelo;
    • Hedin, Alex;
    • Gustafsson, Johan;
    • Kerkhoven, Eduard J.;
    • Svensson, L. Thomas;
    • Palsson, Bernhard O.;
    • Mardinoglu, Adil;
    • Hansson, Lena;
    • Uhlén, Mathias;
    • Nielsen, Jens
    Publication type:
    Article

  • Enhancing metabarcoding efficiency and ecological insights through integrated taxonomy and DNA reference barcoding: A case study on beach meiofauna.

    Published in:
    Molecular Ecology Resources, 2024, v. 24, n. 7, p. 1, doi. 10.1111/1755-0998.13997
    By:
    • Macher, Jan‐Niklas;
    • Martínez, Alejandro;
    • Çakir, Sude;
    • Cholley, Pierre‐Etienne;
    • Christoforou, Eleni;
    • Curini Galletti, Marco;
    • van Galen, Lotte;
    • García‐Cobo, Marta;
    • Jondelius, Ulf;
    • de Jong, Daphne;
    • Leasi, Francesca;
    • Lemke, Michael;
    • Rubio Lopez, Iñigo;
    • Sánchez, Nuria;
    • Sørensen, Martin Vinther;
    • Todaro, M. Antonio;
    • Renema, Willem;
    • Fontaneto, Diego
    Publication type:
    Article